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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0090400 |
| Transcript ID | LotjaGi3g1v0090400.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:10231142..10238472) extracted from Lotus japonicus Gifu genome v1.2.
AAAATACTCACCACAGTCCAGAAAACAAAGGTATCCTTCCTGCTACTCTGCATTTTGCATTTTTGCTGAATCGTTGACTT CAATTCCTTTCTTCGTTTCGTGTCGAATTGGAATCATAATGGCTGCTTCATCCTCGAATCATCAATGGATCTACGACGTG TTCATAAATTTCAGGGGAAATGACACCCGTGACAGCTTCGTTTCTCATCTCCATGCTGCCCTCTCAAACGCTGGAATCGA CGCTTTTTTTGACGATAAGAGTCTTGAAAAGGGAGATGAGCTGAAATCAGTACTGTTGCGAGCAATAGAAGGGTAGGGTC TCGTATATCTTTAGTGGTTCTCTCCCCAAACTATGTTTCATCGAAATGGTGTCTTGATGAACTCATCAAAATCATGGAAT GCCGCAGAACATATGGCCAACTGGTTATTCCTATATTTTACCATGTTGAGCCGTCGGACGTGCGTTATCAGAAGGGTCCT TTTGCTTTGGAAGTAAATTCAAGAAGAAGAGGACGCCGAAGGGAAAACCTGGTGGGGTGGAGGACCGCGCTCCACGAAAT TGCAAATTTGTCTGGTTACGATTTGAGCACCGACAGGTAAATCAATACTCTTTCTACTTTCTTGAAAAAAAGAGAGATGC TAATTCTGTCATTCTGTTTTGTATTTATCATTTGTTCATTATTATTGAAGGAGTGAAGCTGAAGCAATCAATAACATTGT TAAGAATGTTTTCGGGAAATTATACATCAGAGTGATGTCCATTACCAATTTTCCGGTTGGATTAGTATCCCGCTTGCAAG AAGTGATTAAGTTGATTGAAAGCCAACCGAGCAAAGTTTGTATGGTAGGGATTTGGGGAATGGGAGGGTTGGGTAAAACA ACCACAGCCAAAGCCATCTTCAATCAAATTCATCGCCAATTCATGTGTGCAAGTTTCATTGGAAACATTAGAGAAGCTTA TGAGGATAGAAGAGGGCCTATTGATTTACAAGAACAACTTCTTTCTGATATCCTAGAAACTAAGGAGAAGATACATAGCA TTGAAAGAGGGACAGCTATGATTAAGAAAATTCTTTCTGGGAAAAGGGCTCTGGTTATACTTGATGATGTGACCACATCT GAGCAATTGAAAGCCTTGTGTGGAAATCGTGAATGGTTTGCATCAGGAAGTGTAATAATTGTTACAACCAGAGATGTGCG GTTACTTAGTTCACTTAAAGCTGACTATGTGTACAAAATGAATGAGATGAATAAAGATGAGTCGCTTGAGCTTTTCAGTT GGCATGCTTTTGGCGAAGCAAGTCCAGAACAAGACTTCACTGAACTCTCAAGAAGCGTAGTTGCTTACTGTGGAGGGTTA CCTCTAGCTCTTGAAGTCCTTGGATCTTACTTAAATGAGAGGGAGAAAAAAGAATGGAAAAGTGTATTGTCAAAACTAGA CAGAATTCCCAATGATCAAGTGCAACAGAAACTCAGAATAAGTTACGATGGTTTAAAGGATGAGCTGGAAAAGAATATAT TTCTTGACATATGTTGTTTCTTTATCGGTAAAGACAGAGCCTATGTTACAGAAATATTAAATGGCTGTGGATTTTATGCT GATATTGGAATAACAAGACTCATAGAGATGAGCCTCCTAAAAGTTGAAAGGAATAACAAGCTTGGAATGCATGATCTTGT TCGAGATATGGGAAGAGAAATTGTTCGTGAAACTTCAACACAAGATCCCGGGAAGCGCAATCGGTTGTGGTTTCACGAGG ATGCACATGATGTTTTGACCAAAAATACGGTAAGAATACATACATATATATATTTTTTGAATAGCACTGGCAAATCAAAA GCTAACAAGATTGCAGAATACTCAGTAGAAAATGCAGAACTGGAACAATTTCTGAATATGAAAGCTTGATTGAAGAAGAA TCCTGAGGAAGAAGAAGATAACAGAAACAGAGAAGCTCAACTGAATCCCAATTCAGTTGAAGCTCTCTAACTACCTAACT GAATCAACAACCCAACAATATGCAAAAGCTAACTAACTATGAACCATGGGTTCCTATTTATAGTCTCTCTAACCACAAGG TTTATTAAGCACTAATCTAATTATTAAGCACTCAGCTAATTCCCCTTATTGCGTCTGACATAGACTTTACTGATAAGAGG CTTCTGCATCCTCTTGACCCTATCAGAATACATATTGAAACTTTTGAGTTTTCAATATCCCCCACAATCTTTTCAGGATC ATAAAACACTTTGTTTTGCTCTGCTGGAGGTTTATGTATAGAAAATAAAAACTGTTTTCCTTACTTTTTCTCTGTATTTA TATTCTTCACATATAGGGAACAGAAACTGTTGAGGGATTGGTTTTGAATAAGTATTAGGTTGCACCACTGCAACTTTATG TTACATTTTCATGTGAGCAAATGAAAAGGGCTGCCCCCCTTACTTTTCTCAGTTTTTTTTTGTCACATATAGGGAACAGA AACTGTTGAGGGATTGGTTTTGAAGATGCAAAGAACAGAAAGAGGTTGCTTCAATGCTAATGCTTTCAAGGAGATGAAGA AGTTGAGACTTTTGCAACTTGATAGTGTTGACCTCACTGGAGACTACCAGCATCTGTCCCATGAACTGAGATGGGTCCAT TGGAAAGGATTTACTTCCACATTTATACCCGATCACTTTTATCTGGGAAATCTAGTTGTTTTAGAATTAAAGTACAGCAG CATTAAACAAGTTTGGAAGGAAACCAAGGTATAGAACTCAAAGGTTGATGACTATAGGTGGACACCACTATTTTTCCATA TTCTCCAAATTTTTCTTATAAACATTTATCTTCTTGCAGTTGCTGAAGAAGCTAACCAAGGTATAGAACTCAAAGGTTGA TGACTATAGGTGGACACCACTATTTTTCCATATTCTCCAAATTTTTCTTATAAACATTTATCTTCTTGCAGTTGCTGAAG AAGCTAAAAGTTCTCAATCTCAGTCATTCAAAGGACTTGGTAAACACCCCTGATTTTTCAAAACTACCGAATCTAGAAGA GCTCATTCTAAAGGATTGTCCAAGTTTGTTCGAGCTACACCCTTCCATCGCATATCTCAGTAATCTTCTTCTAATAAATT TGGAGGGCTGTACAAGCCTTACCAATCTCCCAGGGAAGACCTATCAGTTAAAGTCAGTTAAAACTCTCATCCTTTCGGGT TGTTCAAAAATTGACAAGTTGGAAGAAGATATAGTGCAGATGGAATCCTTGACAACACTTATTGCAAAAGATACAGCTAT AAAGGAAGTGCCTCATTCAATATTAAGATTGGAAAGCATAGCATATATATCCCTATGTGGATATGAAGGATTAACACGCG ATGTTTTTCCTTCTCTCATTCGATCTTGGATTTCACCAACAATGAATCCCCTATCCCGTATTCCCCTATTTCCGGGCATG TCATTGTCTCAAGTTTCTATGGATATACAGAATTATAGATCAGGCATTTTATCTTCATGGCTTAGCAGCCTATCAAAACT TAGAAGTGTTTGGATACAATGTCACTCGGAGATCCAACTAACCCAAGAGTCAAGAAGAATTCTTGATGATCAATATGATG TAAATTCTATGGACTTGGAAGCATCATCATCATATGCATCACAAATCTCAGATTTTTCCTTGAAATCACTTTTGATAAGA TTGGGAAGTTGCCACACAGTCATTGAGACTCTTGCCAGCAGCATACCACAGGTGTCTTCTCTACCTTCTCAGCTGTTACT GATCTTTATTATTAATTAGGGAATTATTTTCTGTTTGCATTTGTTTGCTTAAAGCTGAAAGTTTCCATATGATACGAACT TATTCAAGTATCTGCGCAATAAACTAATTTAAGTTTGATCATAAGGTCACGTCTGTCACATAGAAGTGGACCAATGTTGT TTCAATAATTGCATTTTGTTTTTTTGTCTACACTGAATCACTAAAAAAATGTATTTTTAGTGGCATTGATACTGTTAAAT TGTGGCACCACAAGTGTTGTTCTCGGCATTTATCTTAAATGCCACTACCACGGATGCCACAACTGGTTTGGTGGCTGTTT TTGCTTAAATGCCGTTTTTTATGCCACAAATTGCTTCAGTAATTACTGGCAGCTTTTAAATGGCATGAAAAGGCCACAAA TTGCACCAACCATTGTATTAACCTCAAATTTTACTGATACGTTGTAAATGCCACAAAGTACTAGAAACATGTAACATAGT GAGGATCAACTATCTCATATTATACGAAAAGAACAAGATAATATGCCTATAGATTGACATGTAGTATATATAACACTCCT GTTTGCCTCTAGATCTACTTTAAACATGTCACCACTTGATTATTGAACTTATTAAACATAACAAACACTAAATTTCAGTT ATGGTAAATTTATGTGTATGGTATAATGGTAGTAGTTATATCCATTCTCAAAATTAACTCTAAGGAAGGTGATGATTCAC ATTCTCAACAGTCTTTTGTTGGCAAGAAAGGAATGACTTGTATCCATTCCACAATTTGAGAAGGAGTGTTGGAAGTCAAT CTTTAGAACATTATGAGAATTATATATTCAGTTATAGGGATTGTGGTAATCTTTTTCATTCGGTAAGAGTTTTGCTGCCA TTATTGATGCATGGAATAGGTTCTAACTTTCTATTGTTAATGATTGCGTTACAAAATTATTAGTTAACTTTTCTTTGTTT TTCTTCATGCAACATATTATCATTATATTTAACATTCACCTTTTGAAATTAAGAATGACACATTACATGGCATGGAGAGT CCATTTGAATGATTAAATAACCGAATGTATATATGTTCTTGATACAGGGATCGACAACCAACGCTTCTAGTAATTTTGTC CTTCCGGGTGGTGATGATCCTTCTTGGTTAGCCTATAAAGGTGAAGGACCTTCTGTACATTTTCAAGTTCCAGAGGATCG TGATTGTTGCTTGAAGGGAATAGTTTTATGTGTTGTTTATTCATCAACACCTGAAAGTATGGCAACTGAATGTCTTACAA GTGTCATGATAAATAATCACACAAAATTCACCATTCAAATCTACAAGAAAGATACTGTAATGTCCTTTAATGATGAAGAT TGGGAGAGTGTAAAATCAAATCTTGATCCTGGTGACAATATGGAGATTATTGTTTCTTTTGGGCGTGGATTGACTGTTAA GGGAACGGCTGTGTATCTAATTTATGCTCAGTCAATCATTATGGAAATTCAGCCATCAATTACTGTGGAAGTTGAATTTG AGCCATCTGTTAATGGGAAAATGGAGCCATCATCTGAAGTGAACATACATCCATCGCCTAACTTGAAAATGGAGCCATCA CCAAAGCCAACTAAAACTATCTTTACAAGACTTGTAAAGAGAATTGGAAAATGTTCATGCTTGAACCAGAATTGAGATTT CTACAATTTCTGATCGGGCAAGGTGTTGTCATAATATAGGATTCCCTTGTTTTATGTGTTTTGCAATATTTTCTAGGAGG GAGGAGGGACAGCACCATGTTTTATGAACATAGAGGAGAAATGGATAATTCATGTGGTTGATGTGCGTTTAAATGAATAC AGTTCTGAAAATGTTAAGAGTTCATTTCTTGTTTTTCTGGCCCTCAAGATTTCTGGACTAGATGCTATGTAACAGCTAGA TAAAAGATGGTATAAATGTGCAAGTCTAGAGAAGGTTGCTGGGTATTATTAGTATAAAGCAGTTTTATGTGTGGAGTGGG GAAGTTTGAAGTATTAGATTCAGAGGGAATCATGTGAATAATAATGTATACACACTACAGGAGGTTATTGTTCCTTCAAA ATTTTATGAAATGGAAGATTGTGCAGTCAATTCCATTACTCTATTAAATTCACTGCCTAGGTTGTGCTGATGTGAGTTTT ATATTATCTCTATTACCATTTTTATGTCTGTATTACTGTGATCATGCTTCATTCAATATCAGATGGTAATTAGTAGTGAT AAATGTTTCTTTAATTCATGCAAATGCAGCTTAGTGCTCAAAAGATAGAACACTCTGCAGATAGGGATCAACCTACAACT CATCCGAGATAGGAAGGAAGGCCGCAAATTTATCTATCTTATAAAGCAAAGTTTAGCCTGTAAGACTTTAAATAATCAAA TTGCAATCATCCCTAACTTGCCTTTTAATATTATATTGTCGTTTGAAATTCATTTCTAGGAGAAGCTTTTATGAACATAC ATATAGTCTCTGTCAAGAAGACATCTATCTATATTTTATATAGGGTGAATCAATTGATGTGAGAAACCATGATTCCTCAA AGCAGAAGCCTGAAGAAAATGCTTTTATAAAGCTAAGGCAGGAAACAACAATGTGCATTATGAATATAGATGGTTATAGG TTAGGTTGGTGGCTTATGACGTAGTTTATGATAGCAATTCCGCAAGTGTACGGATTGATCGAAATAATACAAAAGATTGC CGAACCACAGGGATAGTTGTTGATTAATTTATTCTAAGAGTTTAGTGTTCAGAATATGAAAAAGAAAACAATATAAGTTC TTCTTTGATTCTGCAAACTAAGTTCTCTACCCATCAAACTTATAATTTGTCTTTACTTTTCCTTGTTCTAAACAACTCTT GCTGTTGTGAATTGGTGCTTCCCCAATCCCTGTGGTTCGACAATTCTTTTATATTACTTTGAGCGTACCGTATACTTGCG GATAGCGTATCACATATGATCTTTAAGGGAACTTAAAATTTAAAAACTCCTTCCTCTCACTTATCTCCTTATTTCTGATA TAAGGAGTTTCCTGTGAACGCAGGAAGTATATTCAATTTCTTTTGTCCTTAGATGTGTTTATCTTTGACATTTGAAAAAG CTTTTACTAGTTCAAAAATATTCCCCCATGGATGCTGCATGTTTATCAACGAAGACACTTGAACTTTACAAGAGCATAAG CCATACATGTTACAGGTTGATCTGTGTCTTATCTATCTGTTTGCACATGCTCAGTTGTTTTGTGTGCTGTGTGGTGCCTA TAATCACACTCAATTAACACTACATGATCAACGTGCACCCCAATCCAATTTTGAGTTTGAGTTTTCTTAGATTTTTCATT CACAGATCATGCACTAGTCTGACCATTTTGCTTATTTAACTAGCTTTGTTGCAACTCTTAATTTATTTGTATATATGCAG AAACAAGTAGTATTGGTGGAGAGAAGGAGTGGTACTAGTATTGGGGGTTTGGGTTCATAGATTACGGATGATGGGATGAA TACGAGCTACTGAGGAGTAAATTAAAAGGGGTGTGGAGAACCACTCCTTCT
CDS sequence (LotjaGi3g1v0090400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCATTACCAATTTTCCGGTTGGATTAGTATCCCGCTTGCAAGAAGTGATTAAGTTGATTGAAAGCCAACCGAGCAA AGTTTGTATGGTAGGGATTTGGGGAATGGGAGGGTTGGGTAAAACAACCACAGCCAAAGCCATCTTCAATCAAATTCATC GCCAATTCATGTGTGCAAGTTTCATTGGAAACATTAGAGAAGCTTATGAGGATAGAAGAGGGCCTATTGATTTACAAGAA CAACTTCTTTCTGATATCCTAGAAACTAAGGAGAAGATACATAGCATTGAAAGAGGGACAGCTATGATTAAGAAAATTCT TTCTGGGAAAAGGGCTCTGGTTATACTTGATGATGTGACCACATCTGAGCAATTGAAAGCCTTGTGTGGAAATCGTGAAT GGTTTGCATCAGGAAGTGTAATAATTGTTACAACCAGAGATGTGCGGTTACTTAGTTCACTTAAAGCTGACTATGTGTAC AAAATGAATGAGATGAATAAAGATGAGTCGCTTGAGCTTTTCAGTTGGCATGCTTTTGGCGAAGCAAGTCCAGAACAAGA CTTCACTGAACTCTCAAGAAGCGTAGTTGCTTACTGTGGAGGGTTACCTCTAGCTCTTGAAGTCCTTGGATCTTACTTAA ATGAGAGGGAGAAAAAAGAATGGAAAAGTGTATTGTCAAAACTAGACAGAATTCCCAATGATCAAGTGCAACAGAAACTC AGAATAAGTTACGATGGTTTAAAGGATGAGCTGGAAAAGAATATATTTCTTGACATATGTTGTTTCTTTATCGGTAAAGA CAGAGCCTATGTTACAGAAATATTAAATGGCTGTGGATTTTATGCTGATATTGGAATAACAAGACTCATAGAGATGAGCC TCCTAAAAGTTGAAAGGAATAACAAGCTTGGAATGCATGATCTTGTTCGAGATATGGGAAGAGAAATTGTTCGTGAAACT TCAACACAAGATCCCGGGAAGCGCAATCGGTTGTGGTTTCACGAGGATGCACATGATGTTTTGACCAAAAATACGGGAAC AGAAACTGTTGAGGGATTGGTTTTGAAGATGCAAAGAACAGAAAGAGGTTGCTTCAATGCTAATGCTTTCAAGGAGATGA AGAAGTTGAGACTTTTGCAACTTGATAGTGTTGACCTCACTGGAGACTACCAGCATCTGTCCCATGAACTGAGATGGGTC CATTGGAAAGGATTTACTTCCACATTTATACCCGATCACTTTTATCTGGGAAATCTAGTTGTTTTAGAATTAAAGTACAG CAGCATTAAACAAGTTTGGAAGGAAACCAAGGTATAG
Protein sequence (LotjaGi3g1v0090400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSITNFPVGLVSRLQEVIKLIESQPSKVCMVGIWGMGGLGKTTTAKAIFNQIHRQFMCASFIGNIREAYEDRRGPIDLQE QLLSDILETKEKIHSIERGTAMIKKILSGKRALVILDDVTTSEQLKALCGNREWFASGSVIIVTTRDVRLLSSLKADYVY KMNEMNKDESLELFSWHAFGEASPEQDFTELSRSVVAYCGGLPLALEVLGSYLNEREKKEWKSVLSKLDRIPNDQVQQKL RISYDGLKDELEKNIFLDICCFFIGKDRAYVTEILNGCGFYADIGITRLIEMSLLKVERNNKLGMHDLVRDMGREIVRET STQDPGKRNRLWFHEDAHDVLTKNTGTETVEGLVLKMQRTERGCFNANAFKEMKKLRLLQLDSVDLTGDYQHLSHELRWV HWKGFTSTFIPDHFYLGNLVVLELKYSSIKQVWKETKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 437 | 437 | 1.2E-240 | – | |
| PANTHER | 1 | 437 | 437 | 1.2E-240 | – | |
| Gene3D | 3 | 160 | 158 | 1.5E-29 | – | |
| SUPERFAMILY | 7 | 259 | 253 | 3.05E-62 | ||
| Pfam | 19 | 240 | 222 | 8.3E-34 | ||
| PRINTS | 30 | 45 | 16 | 1.4E-21 | – | |
| PRINTS | 106 | 120 | 15 | 1.4E-21 | – | |
| Gene3D | 164 | 248 | 85 | 1.7E-10 | – | |
| PRINTS | 199 | 213 | 15 | 1.4E-21 | – | |
| SUPERFAMILY | 235 | 341 | 107 | 2.23E-11 | ||
| PRINTS | 414 | 430 | 17 | 1.4E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0090400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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