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LotjaGi3g1v0090400.7

Overview

Field Value
Gene ID LotjaGi3g1v0090400
Transcript ID LotjaGi3g1v0090400.7
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:10245010..10250307) extracted from Lotus japonicus Gifu genome v1.2.

CCGTGTATCACATGGGTATAACAGTAGTCACCTAAAATAAAATCCATAATAGACGAAAGGGTGTAAACCATTTTGCATTT TTGCCTTATCTTATTCGAAGAGTTGACTTGACTTGACTTGACTTGAATTCCTTTCTAGTTTCTTCGTCTCATCACAATGG CTTCTTCATCCTCGAATAATCATCATCAATGGATCTACGATGTGTTCATAAACTTCAGGGGAGAAGACACCCGTGGTAAT TTCGTTTCTCATCTGTATGCCGCCCTCTCAAACGCGGGAATCAACGCTTTCTTTGATGATAAGAGTCTTGAAAAGGGATA TGAGCTGAAACCAAAACTGTTGCGAGCAATTGAAAGGTCTCGAATATCTTTAGCAGTTCTTTCCCCAAACTATGTTTCAT CTATATGGTGTCTTGATGAAATCGCCAAAATCATCGAACCCGGGCTAGAAGGAAATACACATTCACCACCCCTTGTGGGT TATTTATGCTCATTCTGTTAGTGAGTTTTGTATTTATCATAATTATTATTATTGAAGGAGTGAAGCTGAAGAAATTCATG AAATTGTTAAAGACGTTTTCCGGAAACTAGATGTGAGACTGATGTCCATGACAGATTTTCCGGTTGGATTAGTAACCCGC TTGCAAGAAGTAATTAAGTTGATTGAAAGCAAATCGAGCACAGTTTGTGTGGTAGGAATCTGGGGAATGGGAGGGTTGGG CAAAGCAACGACAGCCAAAGCCATCTACAATCAGATTCATCGCAAATTCATGTGTACAAGTTTCATTGAAAACATTAGAG AACTTTGTGAAAGCGATAGTACCAGAGGACTTATTCATTTGCAAGAACAACTTCTTTCTGATGTCCTGGAAACTAAGGAG AAGATACATAGCATTGGAAGAGGAATAGCTATGATTAAGAAAATACTTTCTTCGAAAAGGGCTCTAGTTGTACTTGATGA TGTGACCTCATCTGAGCAATTGAAAGCCTTGTGTGGAAATCGCAAATGGTTTGCATCAGGAAGTGTAATAATTGTTACAA CTAGAGATGTGCGGTTACTTAATTCACTTAAAGCTGACTATGTGTACAAAATGGTGGAAATGGATGAAGATGAGTCGCTT GAGCTTTTCAGTTGGCATGCTTTTGGAGAAGCAAGTCCAAGAAAAAACTTCATTGAACTCTCAAAAAACGTAGTAGCTTA TTGTAGAGGGTTGCCACTAGCTCTTGAAGTCCTTGGATCTTACTTAAATGAGAGGGAAGAAAAAGAATGGAAAAGTGTAT TGTCAAAACTAGAGAGAATTCCCAATGATCAAGTGCAACAGAAACTCAGAATAAGTTACGATGGATTAAAGGATGAGCTG GAAAAGGATATATTTCTTGACATATGTTTTTTCTTTATTGGTAAAGACAGAGCCTATGTTACAGAGATATTAAATGGCTG TGGACTTTATGCTGATATTGGAATAACTGTCCTCATAGAGAGGAGCCTCCTACAAGTTGAAAATAATAACAAGCTTGGAA TGCATGACCTTATTCGAGATATGGGAAGAGAAATTGTTCGTGAAACTTCAAAAAAGGAGCCTGGGAAGCGTAGTCGATTG TGGTGTCCCAAAGATGCACATGATGTTTTGACAAATAATACTGTAAGAACTTCTCTTATATAGACTCTGAAACTTTGATA CAACTACTTATATTTTACTTTTTTCTATACATATCAACAAACTCCGTTTCTCTTTTTTTTTGTTTTGTTTAAGGTTATGT GTAAGAGCTCTTTGATAGTTATATATCTTGATTAAAATATCCTTATTTATTAAGTGAATTATGTAAAAGAGATAATGATA CTAATAGGTTAAGTAATTGGTGTGGAGATATGTGAAAATTGGATGTGTGAGAGATATAATTATAGTAATTTGGGTGAGTA ATAGTGAATAAGTATCACCACTGCAACTTTATGTTTCATTTTCATGTGAGCAAATGAAAAGGGCTGCCCCCTTACTTTTC TCTGTTTTTTTATTTTGTCACGTGTAGGGAACAGAAACTGTTGAGGGATTGGTTTTGAAGATGCAAAGATCAGACAGAGG TTGCTTCAATGCTAATGCTTTCAAGGAGATGAAGAAGCTGAGACTTTTGCAACTTGATAATGTTGAACTCGCAGGCGATT ATGGGCATCTTTCCAAAGAATTGACATGGGTCTGGTGGAGAGGATGTGTTTTCAAACATATATCAAGTGACTTTTATCAG GGTAATTTAGTTGTTATGGACCTGAGACACAGCAATATTGTACAAGTTTGGAAGGAAGACAAGGTATAATATTACCATTT TGTTTTTAAACTCAGTGGTTTATGACAATTGTAATTTCTACCACCTATTCTTTTTCCATTTTATTCTCGAAAATTTCTCT TATACATTTTAACTTCTTGCAGTTTCTGGAGAAGCTGAAAATTCTTAATCTCAGTCATTCTAGGTACTTGAAAAAAACCC CTGACTTTTCAAGGCTCCCAAATATAGAAAAGCTCATCATGAAGGATTGTCCAAGTTTGAGAGAGATGCACCAGTCCATT GGAGAGCTTAGTAATATTGTTCTAATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTCCCAAGGAAAATCTATAAGTT GAAATCTTTGAAAACACTCATCCTTTCGGGTTGTTCAAAGATTGACAAACTGGAAGAAGATATAGTGCAAATGGAATCCT TGACAGCATTGGTTGCCAAAGACACAGCAATAGTAGAAGTTCCATATTCAATAATAAGATCAAAAAGCATTGCATACATA TCCCTATGTGGATATGAAGGATTATCAAGTGATATTTTCCCTTCTCTCATTTGGTCTTGGATGTCACCATCAACAACAAT AAATTACCAATTTCGGATCTCCCCATGTCGGGGCATGGCACTGTGTCCAGTTTCGATGAATATGCAAAATTATAATTCTG GTGATATATCACCATTGCTTCCCAGCCTTTCAAATCCTAGATGTGTTACGATACAATGCGGCTCGGGGATTCAACTAACA CAAGAATTAAGAAGATTTCTTGATGATCAATATGATGTAAGTTTTGCTGAAACAACAACAACATCACATACATCGCAAAT CTCAAATTTCACCATGAGATCATTTTTGATTGGAATGGGAAGTTGCCACTTAGTCACCGATTCTCTTGGTCAAAGGATAG CACAGGTTCCTTTTCTATCTTCTCACCTTTACTGATCTGTACTAATTAGGAAACTTGGGATAGTTTTCTATTTGAATTTA TTTTCCTTAAAACTAAAAGTTCCCATATGATATGAATTTATTCAAGCATCTATACGAAAAACTATTGGATTGCTTGATTT CATTCATATATAGATCTATTTCCTTATTTTTAGGCGATATATTATTTGTTCATATTTTTACTAGTAATTAGGAGATTCCA TAATTGAGTCAGGTTAGTTTCCTATATGTTGTACAAACCTTGTATTGTTTTCTATCATCAAACATAAAGTTCATATGTTA GATAACATATTCTAACCAGACATTAGAACACCAGATGTGGGAGACTCTGCTTCCATGCACAAGCCCTAACTCAGTCATTT AAGCAATTTAAGCATCTGTACCTACCGTCAATGGTGGGTCTGATAGCGGTAGGTATGCATTTAGGGTTTGTAAAATCAGT TGTTGAAGAAAGGAACATTCTAGCAAAATTGAGTGTTATTTAATTTTGAATTTTTTATTTTTACTTGGTGGTGCACCCAT GGATCACTATTTTAGCTGGTTCATGCTCGCTGCGGCCCTAAAATTGAGTCAAGATTTAGGCGGTGCCACCCAATTCCTCT TTTTTCCATGTCTCTTTGTTTCTTCACTTATAAGCTGAAGGTGTGTCATGTTAATATTTTCGAACCCACTCACCCACCTT TTCATATATTATATGTACCTATTGCACTATAAGTTGCTCAAAAAGTCCATCTGGATAACATAATTAAACCTCAATAACCA AAAATATGTTCATCATACAGGGATTGGCATCCAGTGATTCTTACAACATTTTCCTTCCGGGTGACAATTATCCTTCTTGG GAAGCCTTTACAGGTGAAGGAACTTCAGTACATTTTGGTGTGCCTGACCATGATAGTGATTGTAGCATGAAGGGAATACT TTTATGTGTTGTTTATTCATCAACACTTGAAAACATTGCGACTGAAAGTCTTATTAGTGTCTTGATTATTAATTACACAA AATTTACCATCCAGATATTCAAGCGAGACACAGTAATGTCCTTTAATGATGAAGATTGGCAGGGTGTAATATCAAATCTA GGTTCTGGTGACGATGTGGAAATTTTTGTCGCTTTTGGCCATGGATTGATTGTTAAAGTGACCGCTGTCTATCTAATATA TGGTGAGTCAAATGCTATAGAAATTGTGCCATCAATTAAGGTGAAAATAGAGCCATCACCTCAAGTGAACGTGGTATCAT TACATAATGTGGAACTGGGGCCTTTACCTGAAGTGAATATGCAGCCATTGCTTGAAGTGGAAGTGGAGCTTTCACCTGAA GTGATTGTGCAACAATCAGCTAAGGTGGAAATGGAGCATTCACCTGAAGTAAATGTTGTGAAGAAAAGGTCTTGCTCCTC CAACTTTAGGCATGGTTTTGATGATCACAACAACACTACAAAGAAGAAAAAGAATTGAAGACCTCTAGTTAGAGGAGTGA AGGTTGTAATAACTAGATTTATTGCTTTCTTTATTGCTTACTTAGTAGGTTTTTAATTCTAATGAAAAACACTTAAGTCC TTCATGGTGCAAACAACCAATCTGGGTAACAGATTACCAGATTTCAGTAATAGATTACTAGGCTGAAACAGTGCAGTGGT AGCACAGGTGTTTGTTAAAAACACTTTCTTTTCTCTCTTGGGTCATATAAGAAGTTGAATATGATTGTATGAGAGGTTGG GCACGAACATATAAGGCTTTCTCACTTCCATAAACACACAACACACTTTTACATTAGATTTGAGATTTGAGAGCCCATTA TCAAAAGGATTCCAAGTGTTCTTTATCTTTGGTCTTCTCTCTCAATTGAATGAGGATGAATGTCATTGCCTGCATATCTC TTCTTCTTCATTGATCAATTCAAGAATTGAATTGTGCACCACAGAGTTTGGTGTGGAAGAGCATATAAGGTTCTTGTTCT TGCTTGGTTGATAAGATGTAAGGTTCTTGGTGTAATTGCTTTGGTTTCTTATCACAGTGGAAAAAATCCCATCTACCAAG ATGGGGACTGGATGTAGC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0090400.7) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCATGACAGATTTTCCGGTTGGATTAGTAACCCGCTTGCAAGAAGTAATTAAGTTGATTGAAAGCAAATCGAGCAC AGTTTGTGTGGTAGGAATCTGGGGAATGGGAGGGTTGGGCAAAGCAACGACAGCCAAAGCCATCTACAATCAGATTCATC GCAAATTCATGTGTACAAGTTTCATTGAAAACATTAGAGAACTTTGTGAAAGCGATAGTACCAGAGGACTTATTCATTTG CAAGAACAACTTCTTTCTGATGTCCTGGAAACTAAGGAGAAGATACATAGCATTGGAAGAGGAATAGCTATGATTAAGAA AATACTTTCTTCGAAAAGGGCTCTAGTTGTACTTGATGATGTGACCTCATCTGAGCAATTGAAAGCCTTGTGTGGAAATC GCAAATGGTTTGCATCAGGAAGTGTAATAATTGTTACAACTAGAGATGTGCGGTTACTTAATTCACTTAAAGCTGACTAT GTGTACAAAATGGTGGAAATGGATGAAGATGAGTCGCTTGAGCTTTTCAGTTGGCATGCTTTTGGAGAAGCAAGTCCAAG AAAAAACTTCATTGAACTCTCAAAAAACGTAGTAGCTTATTGTAGAGGGTTGCCACTAGCTCTTGAAGTCCTTGGATCTT ACTTAAATGAGAGGGAAGAAAAAGAATGGAAAAGTGTATTGTCAAAACTAGAGAGAATTCCCAATGATCAAGTGCAACAG AAACTCAGAATAAGTTACGATGGATTAAAGGATGAGCTGGAAAAGGATATATTTCTTGACATATGTTTTTTCTTTATTGG TAAAGACAGAGCCTATGTTACAGAGATATTAAATGGCTGTGGACTTTATGCTGATATTGGAATAACTGTCCTCATAGAGA GGAGCCTCCTACAAGTTGAAAATAATAACAAGCTTGGAATGCATGACCTTATTCGAGATATGGGAAGAGAAATTGTTCGT GAAACTTCAAAAAAGGAGCCTGGGAAGCGTAGTCGATTGTGGTGTCCCAAAGATGCACATGATGTTTTGACAAATAATAC TGGAACAGAAACTGTTGAGGGATTGGTTTTGAAGATGCAAAGATCAGACAGAGGTTGCTTCAATGCTAATGCTTTCAAGG AGATGAAGAAGCTGAGACTTTTGCAACTTGATAATGTTGAACTCGCAGGCGATTATGGGCATCTTTCCAAAGAATTGACA TGGGTCTGGTGGAGAGGATGTGTTTTCAAACATATATCAAGTGACTTTTATCAGGGTAATTTAGTTGTTATGGACCTGAG ACACAGCAATATTGTACAAGTTTGGAAGGAAGACAAGTTTCTGGAGAAGCTGAAAATTCTTAATCTCAGTCATTCTAGGT ACTTGAAAAAAACCCCTGACTTTTCAAGGCTCCCAAATATAGAAAAGCTCATCATGAAGGATTGTCCAAGTTTGAGAGAG ATGCACCAGTCCATTGGAGAGCTTAGTAATATTGTTCTAATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTCCCAAG GAAAATCTATAAGTTGAAATCTTTGAAAACACTCATCCTTTCGGGTTGTTCAAAGATTGACAAACTGGAAGAAGATATAG TGCAAATGGAATCCTTGACAGCATTGGTTGCCAAAGACACAGCAATAGTAGAAGTTCCATATTCAATAATAAGATCAAAA AGCATTGCATACATATCCCTATGTGGATATGAAGGATTATCAAGTGATATTTTCCCTTCTCTCATTTGGTCTTGGATGTC ACCATCAACAACAATAAATTACCAATTTCGGATCTCCCCATGTCGGGGCATGGCACTGTGTCCAGTTTCGATGAATATGC AAAATTATAATTCTGGTGATATATCACCATTGCTTCCCAGCCTTTCAAATCCTAGATGTGTTACGATACAATGCGGCTCG GGGATTCAACTAACACAAGAATTAAGAAGATTTCTTGATGATCAATATGATGTAAGTTTTGCTGAAACAACAACAACATC ACATACATCGCAAATCTCAAATTTCACCATGAGATCATTTTTGATTGGAATGGGAAGTTGCCACTTAGTCACCGATTCTC TTGGTCAAAGGATAGCACAGGGATTGGCATCCAGTGATTCTTACAACATTTTCCTTCCGGGTGACAATTATCCTTCTTGG GAAGCCTTTACAGGTGAAGGAACTTCAGTACATTTTGGTGTGCCTGACCATGATAGTGATTGTAGCATGAAGGGAATACT TTTATGTGTTGTTTATTCATCAACACTTGAAAACATTGCGACTGAAAGTCTTATTAGTGTCTTGATTATTAATTACACAA AATTTACCATCCAGATATTCAAGCGAGACACAGTAATGTCCTTTAATGATGAAGATTGGCAGGGTGTAATATCAAATCTA GGTTCTGGTGACGATGTGGAAATTTTTGTCGCTTTTGGCCATGGATTGATTGTTAAAGTGACCGCTGTCTATCTAATATA TGGTGAGTCAAATGCTATAGAAATTGTGCCATCAATTAAGGTGAAAATAGAGCCATCACCTCAAGTGAACGTGGTATCAT TACATAATGTGGAACTGGGGCCTTTACCTGAAGTGAATATGCAGCCATTGCTTGAAGTGGAAGTGGAGCTTTCACCTGAA GTGATTGTGCAACAATCAGCTAAGGTGGAAATGGAGCATTCACCTGAAGTAAATGTTGTGAAGAAAAGGTCTTGCTCCTC CAACTTTAGGCATGGTTTTGATGATCACAACAACACTACAAAGAAGAAAAAGAATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0090400.7) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSMTDFPVGLVTRLQEVIKLIESKSSTVCVVGIWGMGGLGKATTAKAIYNQIHRKFMCTSFIENIRELCESDSTRGLIHL QEQLLSDVLETKEKIHSIGRGIAMIKKILSSKRALVVLDDVTSSEQLKALCGNRKWFASGSVIIVTTRDVRLLNSLKADY VYKMVEMDEDESLELFSWHAFGEASPRKNFIELSKNVVAYCRGLPLALEVLGSYLNEREEKEWKSVLSKLERIPNDQVQQ KLRISYDGLKDELEKDIFLDICFFFIGKDRAYVTEILNGCGLYADIGITVLIERSLLQVENNNKLGMHDLIRDMGREIVR ETSKKEPGKRSRLWCPKDAHDVLTNNTGTETVEGLVLKMQRSDRGCFNANAFKEMKKLRLLQLDNVELAGDYGHLSKELT WVWWRGCVFKHISSDFYQGNLVVMDLRHSNIVQVWKEDKFLEKLKILNLSHSRYLKKTPDFSRLPNIEKLIMKDCPSLRE MHQSIGELSNIVLINLKDCTSLSNLPRKIYKLKSLKTLILSGCSKIDKLEEDIVQMESLTALVAKDTAIVEVPYSIIRSK SIAYISLCGYEGLSSDIFPSLIWSWMSPSTTINYQFRISPCRGMALCPVSMNMQNYNSGDISPLLPSLSNPRCVTIQCGS GIQLTQELRRFLDDQYDVSFAETTTTSHTSQISNFTMRSFLIGMGSCHLVTDSLGQRIAQGLASSDSYNIFLPGDNYPSW EAFTGEGTSVHFGVPDHDSDCSMKGILLCVVYSSTLENIATESLISVLIINYTKFTIQIFKRDTVMSFNDEDWQGVISNL GSGDDVEIFVAFGHGLIVKVTAVYLIYGESNAIEIVPSIKVKIEPSPQVNVVSLHNVELGPLPEVNMQPLLEVEVELSPE VIVQQSAKVEMEHSPEVNVVKKRSCSSNFRHGFDDHNNTTKKKKN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017:SF301
1 889 889 0.0 –
PANTHER
PTHR11017
1 889 889 0.0 –
Gene3D
G3DSA:3.40.50.300
3 162 160 2.1E-27 –
SUPERFAMILY
SSF52540
6 261 256 3.72E-58
IPR027417
Pfam
PF00931
19 243 225 1.8E-32
IPR002182
PRINTS
PR00364
30 45 16 2.2E-23 –
PRINTS
PR00364
108 122 15 2.2E-23 –
Gene3D
G3DSA:1.10.8.430
166 250 85 8.4E-9 –
PRINTS
PR00364
201 215 15 2.2E-23 –
SUPERFAMILY
SSF52058
307 583 277 2.55E-27 –
Gene3D
G3DSA:3.80.10.10
348 599 252 2.6E-25
IPR032675
PRINTS
PR00364
510 526 17 2.2E-23 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0090400.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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