Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0098200 |
| Transcript ID | LotjaGi3g1v0098200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor kinase; TAIR: AT4G27300.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1; TrEMBL-Plants: tr|A0A072TGW7|A0A072TGW7_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0098200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12272369..12274361) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGCTAACTCAGTTAAAACTAATTCTCTATCTTACTGTAAATGCAGATGCAAAAGATGGGGGTAGGAAAAAGGTAGTC TTGACAGTAACAATCACAGTTTCAGTTGTTCTGGTGATGATGTTATTGGGATTCTCCTACATTTGCATTACAAAGACCAA GAATAAAGGTAAGTTTCTTTGTCAAAAGGAATTTTTTACTCATTTATGATACATAAACACCCAAATAGTACAGTCATTCC ACATACATTTTCTGACATTGATCTCACTTAATAAAAAGAAGAAGTAAACAAAACCATGTTGGTGAAAGAGATAGATGAAG GTGGTGATGATGACTTGGAGCTTCCTTTCTTTGATGTCCCTACTATACTCAATGCAACCAATAACTTCTCAATCAACAAT AAACTTGGTGAAGGTGGTTTTGGACCAGTTTACAAGGTAAATTTGACATATGTACTCTACTAATAAAGTGAAGGGAAACT CAAGGATCTCATTATCTGTCTTATTTTTCTTTAACTAAAACATTTAGGGTACATTACTAAACGGACAAGAGATTGCAATT AAAAGGCTTTCAAGAAGTTCAGGGCAAGGATTGATAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAACATCG AAATCTTGTCAAAGTTATTGGTTGTTGCATTGAAGGAGAGGAAAAAATGCTGGTGTATGAATACATGTCCAACAAAAGCC TGGATTCATTTATTTTTGGTGAGTATTGCAGAGCTTCATATTTAGTATAGTATGAGATCCATATTTAGTATAGTATAAGT ATGGATTGTTTTACTAATCATACTTGAAAGAAAGGACTAATTAAATTATTTGACAATCTTGACAGATTCGGTTCAAAGTA AATTGTTAGATTGGTGTATGCGCTTTAACATCTTGTATGGAATTGCTCGAGGGCTTCTTTATCTTCATGAAGATTCTAGA TTAAGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTATTAGACAATTATATGAATCCAAAAATTTCGGATTTTGG CATGGCTAGAATATGTGGAGGTGATCAAATTGAAGGCACAACAAATAGAATAGTTGGGACATAGTAAGTATCTTAGATAT ATACCTCTAGCTTAAGTTTTAATATGATTAGTTTAGCATTAAAATTAATTCTTCTGTGAATACTTTCAGCGGTTATATGG CACCTGAATATGCAATTGATGGATTATTCTCTATAAAGTCGGATGTATTTAGCTTTGGCGTATTATTGCTAGAAATTGTA AGTGGAAGGAAGAATAGAGCACTTACCTACCATGACCATGATCACAATCTTATTGAACATGTAAGTAACTAAAAGAATCA TTGGCTTTCCTATCACACATTAGTAGTGGATTAATTACAATTTTATTGAATTTTTGTAGGCATGGAGATTGTGGAAAGAG GGCAATGCACACGAATTGATAGATGATTGCATGAGTGACTCATGTATTAAATCTGAAGTTTTACGCTGCATTCAAATTGC TCTTTTATGTCTACAACATCATCCTGATGATAGGCCAAACATGACTTCAGTGGTCGTGATGTTGAGCAGTGAAAATAGTT TACCTGAACCAAAGGAACCTGGTTTCTTAATTAAGAAGGTGTCGATTGAAGGAGAACATTCTTCTGGAAAACAGACATCT TCTTCAATGAATGAAATAACTATATCTATACATGCTAGATAGAGGAATTAACTTATCTTTTTTTTCTTTATATTATACTA GTACTTTTTACCCGTGCGATGCACGAGGGATATTAATTTTTGAGTTTTGTGTATGTTTTTTTTTTTTTGTTAAATCTCAA TCAGTTGAAAATAATGCGGTTACTAATTTTTAATGCAATTAATAGGTCTTCCTTTAAATTCTCAATCAGTTGAAAATAAT GGGGTTACTAATTTTTTTTTGAAACTGATTACTAATTAAATGCTTTAAATCCAATTTTGAAATTTTAAAAATG
CDS sequence (LotjaGi3g1v0098200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGTGAAAGAGATAGATGAAGGTGGTGATGATGACTTGGAGCTTCCTTTCTTTGATGTCCCTACTATACTCAATGC AACCAATAACTTCTCAATCAACAATAAACTTGGTGAAGGTGGTTTTGGACCAGTTTACAAGGGTACATTACTAAACGGAC AAGAGATTGCAATTAAAAGGCTTTCAAGAAGTTCAGGGCAAGGATTGATAGAATTTAAGAATGAAGTTATATTGTGTGCC AAACTTCAACATCGAAATCTTGTCAAAGTTATTGGTTGTTGCATTGAAGGAGAGGAAAAAATGCTGGTGTATGAATACAT GTCCAACAAAAGCCTGGATTCATTTATTTTTGATTCGGTTCAAAGTAAATTGTTAGATTGGTGTATGCGCTTTAACATCT TGTATGGAATTGCTCGAGGGCTTCTTTATCTTCATGAAGATTCTAGATTAAGGATCATACATAGAGATCTTAAAGCAAGT AATATTTTATTAGACAATTATATGAATCCAAAAATTTCGGATTTTGGCATGGCTAGAATATGTGGAGGTGATCAAATTGA AGGCACAACAAATAGAATAGTTGGGACATACGGTTATATGGCACCTGAATATGCAATTGATGGATTATTCTCTATAAAGT CGGATGTATTTAGCTTTGGCGTATTATTGCTAGAAATTGTAAGTGGAAGGAAGAATAGAGCACTTACCTACCATGACCAT GATCACAATCTTATTGAACATGCATGGAGATTGTGGAAAGAGGGCAATGCACACGAATTGATAGATGATTGCATGAGTGA CTCATGTATTAAATCTGAAGTTTTACGCTGCATTCAAATTGCTCTTTTATGTCTACAACATCATCCTGATGATAGGCCAA ACATGACTTCAGTGGTCGTGATGTTGAGCAGTGAAAATAGTTTACCTGAACCAAAGGAACCTGGTTTCTTAATTAAGAAG GTGTCGATTGAAGGAGAACATTCTTCTGGAAAACAGACATCTTCTTCAATGAATGAAATAACTATATCTATACATGCTAG ATAG
Protein sequence (LotjaGi3g1v0098200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVKEIDEGGDDDLELPFFDVPTILNATNNFSINNKLGEGGFGPVYKGTLLNGQEIAIKRLSRSSGQGLIEFKNEVILCA KLQHRNLVKVIGCCIEGEEKMLVYEYMSNKSLDSFIFDSVQSKLLDWCMRFNILYGIARGLLYLHEDSRLRIIHRDLKAS NILLDNYMNPKISDFGMARICGGDQIEGTTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIVSGRKNRALTYHDH DHNLIEHAWRLWKEGNAHELIDDCMSDSCIKSEVLRCIQIALLCLQHHPDDRPNMTSVVVMLSSENSLPEPKEPGFLIKK VSIEGEHSSGKQTSSSMNEITISIHAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 8 | 106 | 99 | 3.0E-36 | – | |
| SUPERFAMILY | 14 | 311 | 298 | 6.34E-84 | ||
| PANTHER | 15 | 313 | 299 | 3.4E-134 | – | |
| PANTHER | 15 | 313 | 299 | 3.4E-134 | – | |
| SMART | 31 | 302 | 272 | 1.1E-34 | ||
| ProSiteProfiles | 31 | 316 | 286 | 36.739 | ||
| Pfam | 32 | 300 | 269 | 5.0E-47 | ||
| CDD | 37 | 302 | 266 | 4.37161E-92 | – | |
| Gene3D | 107 | 313 | 207 | 6.8E-60 | – | |
| ProSitePatterns | 152 | 164 | 13 | - | ||
| Pfam | 304 | 344 | 41 | 2.6E-8 | ||
| MobiDBLite | 327 | 347 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0098200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…