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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0099200 |
| Transcript ID | LotjaGi3g1v0099200.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G25160.1 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|A0A0R0JNN0|A0A0R0JNN0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12344246..12350486) extracted from Lotus japonicus Gifu genome v1.2.
AACTCTCAGCGTCCCCCGACTTCGGCAGTTGCTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTCGTGCAGTGGGC ACTTAATAAGTTTGTTCCTGAAGGAATGATTATCTTCAAGCTCATACATGTCCATGCTGGTATAAAAGGCGTTCCAACAC CAAGTAATATATATGTGTGTTTTATGCTTGTATTCAAGAAAGTAGTTTTTTCTATTCATTTAAAATTTACAAATATTTTC TTATATTGGAAACTTCTAAGTGCAATGATAACTGAACAATCACACTTGTATCCTGAAGAAATTGGTATGTGAAGTTAGAT CTTTTCTAAAATGTCTGTGGATCGTTGTGATTAGCAGTTTTGCATTCTGTCTCAATGTTAGGGAACTCTTATATCTTCAA TTCTGAATTATTTTTGTGTCCATCTACCTTATTAGTTGTTCTTTTACCATTTGATGTTATCAGCATGAAAAGATTAGTAA CTAATGTAGCTTTGCTCAGAAGTTCTCAATATATTTGATTGTGTATGACTATAGCTGGTTGTTATGAATTAGAAAGAGAA GATTTTATATGGCTATTTCATTGTGATAATTCAAAAAATTTGTACTTCCAGTGGGAAATGTGATTCCCCTTTCACAAGTG CGCAGTGACATAGCAACTGCTTACAAACAGGAAGTGGAGATGCAAACAAATCAAATGCTTCTACCCTTTAAGAGAATGTG TGAGCAGAGAAAGGTCAGATATTGTTGTTCGTGGAGATTAATAAGAATAATTGATGTACTACAAGACCTATATTCTTATA TTGTTGGTGCAGGTGCATGTAAATGTTGCAGTGATTGAATCCGATGATGTGGCAACTGCGGTTGCAGAGGAAGTAGCTAA GGATGCTATAACCAAACTTGTCGTTGGAGCTTCGTCTCGAGGCTTATTTAAAAGGTATATATTGAAACACTGATTTATAA TGCAACAAGCTTAGGCATCATGATTTGGCCATATTTGGGGAGTTCTACCATGCCCTACATTTGCAGTGTTCAAATTGGAG AGCATAGCAAGTCATCTTATACTGCAATCTGAATGATTTTGAGTGACTCCTTATATACGTGTATATTTATGATGATCAAG ATTTTAGTTATAGCCAGTGCACTATCCTTTTGTAATTCTCAGCATTTCTTTGAAATTCAGCAATTTTCTAGATGCGGAAA TTAATTTGGGCCTTTCTTAAAGGAAATATGAAGCAAAATAATAATATTATTTTCTTAAATATTTGTTTGCATATGTCATG TCCTATTCTTGCACGTAATGGTTTGATTTACATATGCAATATGCCTCATCTTGATAGTCATTTTGGCTTGAAACATGGAT GAACATTTCTAGAATTTGATTCAATTGAGAATGGAAGCGGTGATTATCAATTTTTGGTCACTTGATTCAAGAGGATCTCG TATCACACTAAGAACCAATACTAGAAGCTAGAGGTGTTAAAAGAGGGTTGGGAACTGCTGTTGATTTATTATTTATATGT CTAACATATTCCTTTATAGGTTTCTAGATAGTGTTTATAGGATACCATGCCTCTCTAGTTTGCGATCTGTCTATTTTGGT TGTAAACTGTTGAGAAGTCTCACATTGAATAGGACCAAAATAGTTCTTATAAAGGGTAGAGCAACCGCCACTCCTAAGCT AGCTTTTAGGGTAGAGTTAGGCCTAACCCAAATTTTGAGATTAACCAATGCTCTCTTTGTCTCAAACCACCACCCTTCTC TTCAGTTCTTTGGCATCAATGTGAGCACTTAAATGTTGTCCATCAAGCATGTTACATGTAGTCATGGCATAGTGCACCGG AAAGAATCTGATTCTGCCAAATCAATTTATGCACAAACAACTTCTAATGGATATATCATATAGATATATGTTTGTATCAT TGTTGTCTTTCTCTTTTTTATTGATATGCATTTTTCTGTAATGTCTTGCTTTCAGTAAACAGAAGGGTATGTCTGCAAAA ATCTCAGTCTGCACTCCAAGATTTTGTACAGTTTTTGCTGTTTCAAAAGGAAAATTGTCCATTCGGCAATCAGACATGCA GTATGAAGGAAGCATTAAAGATGACATTAGTGATACCAGTTTTTCCTCCGGCAGCTCATCAAATTATACTTCCACCACTC AGACAGGTATACAAATATAGTTCTGCATTACTGGATTTAAAAACTAAGAGTTAATTGCAGAACAAAAATGCCTTATAGGA AGAATGGAGTTTCTTAGCACTATTTTTAAACCGTAAAATAATTGTTAAGAACACATTCCAATTACTTAATGTTTCCTAAT ATCTCAATCAATGGATTTTGTGTGGAAATGACCTATTAGAAATATCGGATAAGGCCATTCTTGTGTGTTCATCTAACAAC TTAAGTTTTTGGTATAGCTGGTTCATGAAATTATCTTTGCTATCATCACATAAGTATTGGGGCTCCAAAGTTTACCTTGT GCAAAAATAATATTTAAACAACCAAAATAATGATGAAAAGTACTAATAAAATAAAAAACATACTTAAATAGCGAAATAAC ACAATAACAAACTTATAAGAACAAATAAAATCATACATAAATTGGGTTTTTCTCCAGTTTTTACAGAAGTCTTGAACTCT GTAATAAACTCGCGTGGTCACCCGAGTTTATCAGAACATTTTCATGCGATGTAACTCGCTTTGGTCACCTAGGATCATAA AATCGTATGTACGACTTTACAAATTAAAACTAGATTTTAGCAACCATTATGAACCTACTCATACTCCAATATAGAAAAGA GTCATCAATACCTTTATTATTACACTGCTGTTACCAATTCTAATATGCCATTGAATGTTCATATTACTCAGACTGCTAAT AAACACAACACTTTAATGTGCTTGGTTTCAAAGGTCTGCTTACTGACTTTGTATGGAAGTTTTAGTTTGTGTTGCATCAT GAGAAACGTCAAATTTTAATTCCCTTTGGTAGAATAATCGCTGTTTGAATGTATACAGACTCTGGATCAATTGGATCATA TCCTGGTTTACGTTCCTCGCTGCCAACACAGAGATTTCAAGCTCTTTCAAGTATAAATCAGAGCCTTCTAAGTACAACAA CTAGTATAAATGAAACTAATCATTCTAGAGGCCAATCTCTTGATTTTGGAAGAGAAAATGCTGCTCCAAGTTCTGCTAGA AACTCAGATACTGATCGTGCTCTGAGTCGGGTCTCTAGTTGCAGAAGCTTTATTTCAGATACTGAATCTTGGATTTATGA ACAAAGTTCTTGCAAGGATGTGTCACTAGCAGATAAATTTCCATCACCAAATAGGCAGGTAATTGGAAGTTCTTTCTTTG GACTTGATGAAATGGTATCCAACTCATACTCTGGTTGATGGTGCTATCTTGTAAGCATTATCTAATATATAATTTTGTGA TTAGAATTAACACTGCGATAAATAAATTATGTTTTATGGTTTACACTATCTCATTTGGCAAGACTCCATCAATAAAATAA AAAGTTCCATCTTGACTACAATTATTGTGGTGCTCCTTTTCTAGCAAATGCAAATATGTATGTTTTGTCTTTCGTTTCTT CATATCAGATGATATATGCTAGGCATATTTTGATTCACATGCAATCTTGTATAGAGAACTATATGTTATTTGTCAAATAG CTATTGCTTGCTTCAGCTAATTCCAGTTGGATAAAACTTCCACTTACAAGTGAACTTTCTTTGTGGTCGTTTATTTGGTC AGGCAAATTTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGAATGCATGCTGTAGCTCAAAGT GAGAACATTGATGCATCAAGAAAGGTGATGTCTATTTTCTTATGGCCAGAAGCCCTTCTAGATTCTCTTTTGCAACTGTT TCTTCTTCTTAATAAGTAAAAGCGGCCTTCTATTATGCTCTAGTTTCTTCCTTTTTCTCTATCTTTTTATTTTTTAGCTC TTACAATATATAATACCCTACAATAGCAATTGGAAGATGAATTCTCCTTCCATATGCCAAGGATTGAATCTTCTGATTGG CATTGTCAATTGAAGTAACATCTGCAATTGCTTTGAACAGCTTAATGAACTCAGCAAAAGAAGATCCGAAGAATCCATGA AAATGAAAGAGATTATTTCTAAGGAGGAGGTGGCCGAGGAGTTAGCAAGATACGAAATAGACAAATATGATGCTGCAGTA AGAGAATCTGCTTATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAGAAAAGAAACGGAGTTGAAAGCTATACGTGC TGCCAAAGAGAAAGATAAGCTGGAGGGTGCTCTAAGTGGTTCTGTTCTCCAGTACCGAAAGTTTACCTGGGACGAAATAG TTTCAGCTACTTCATCTTTTTCTGAAGATCTGAAAATTGGAATGGGAGCATATGGAGTGGTGTATAAGTGTACTTTGTAT CATACAACTGTTGCTGTTAAAGTTCTCCACCCTAATGGAAACCGCCAAAGTAAGCAATTCCAGCAGGAGGTATGGAAGTT ATACGAAACGAATATGCAATGCTTTAATTTGCTGAAGCTCTTTCTGGTTCTTTAGATGACAAGTTTATTTCATCTATGTT CATAGTCCTACTTCAAATATGATATTTTGTGGTTAAATTATTTAATATAGTGTTCTTAAGGTTAACCATTTAACACTACC ATTTTCCTGTCATAAAAAAATTTGTTGTGGATATTCATTGTTTTCTTCCATTCTTCTTCACAAGATGCAAACCCACTAAT TCAATCAAGTTGGTAGAGGCATTTTGAGTTTTAGTTGTTAGCAATACAGTGTCTAATGCACTTTTTTCAACACTATTATT GGACGAGTTCATGCGGGTTGCACTAAACAGAGACTAGAATCCACACAATTTAGTGGAACCCGCGTGAACTTGACCTATGA AAAGTGTGTGTTAAAGAGTAAGTTGCTATCATTTCCTCTTATAACTTCATGCTTTTCTTATGTGGCACTCACCCCATAAC TTCATTAAAACAACCTTCATTGTAATATTTATAGTGGTCAATGAAAAGTATATCTAATGATGAGTATGTATGAGGACTTA TATGATCTATTTGCTTCCAGCTGGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCT GATCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAGCTTGGAGGACAGACTACTCCAAAAGAACAGTACTATCCC AATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAAGTTGCATCAGCTCTTGCCTTTCTTCACAGCACAGAACCAGAAC CTATCATCCATCGTGACATGAAACCGGCAAACATCTTGCTCGGTCGGAACCTTGTCAGTAAGATTGGTGACATAGGCCTT TCTACAGTCCTCAGTTCAGATAGTTTATCTACCATGTATAAGGACTCAGAGCCTGTTGGGACACTCTGCTACATCGATCC TGAGTATCAAAGGACTGGATTAATATCCCCAAAGTCTGATGTTTATGCTTTTGGAATAGTGATCTTACAGTTATTGACAG CAAAATCAGCAATGGCAGTTACTCATGTGGTTGAAACAGCTATTAATGATGGGAAATTAACAAATGTGTTGGATCCAAAG GCAGGGTCATGGCCATTTCAAGAGACACTAGAATTAGCTCGGTTAGGACTGAGCTGTGCAGAGCTTCGGCGTAGAGACCG GCCCGATTTAAAAGATCAGGTGCTTCCAACCCTGGAGAGATTGAAAGAAGTTGCTGCTAGAGCTCAACATTCTTCTTCAA TTGTTACTATTAAATCCAGACCTCCTAATCACTTTATCTGTCCAATACTTCAGGTAGTGAAATACTCCACAATGGAAAAA ATATATTGATCTATATATTGCACAATAAGAAATGAATGAATGAGCCACCATTTCAGACAAAGATACTTAGTCATACATTG CTTCCTAACTTTCTTCTTATTGTTGCTGAGGATGTTTATTGTGCTTTGTTTGATGCAGGATGTGATGGATGATCCTTGCG TTGCAGCGGATGGATATACGTATGATCGCAAAGCAATTGAAAAGTGGCTTCAAGAGAATGATAATTCACCAATGACAAAT ATGGCTTTGCCTCATAAGAATCTAATTCCTAATTACGCACTTGTGTCAGCAATTTTGGAGTGGAAGTCCAGTGAAATATG A
CDS sequence (LotjaGi3g1v0099200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTATCTTCAAGCTCATACATGTCCATGCTGGTATAAAAGGCGTTCCAACACCAACAACTGCTTACAAACAGGAAGT GGAGATGCAAACAAATCAAATGCTTCTACCCTTTAAGAGAATGTGTGAGCAGAGAAAGGTGCATGTAAATGTTGCAGTGA TTGAATCCGATGATGTGGCAACTGCGGTTGCAGAGGAAGTAGCTAAGGATGCTATAACCAAACTTGTCGTTGGAGCTTCG TCTCGAGGCTTATTTAAAAGTAAACAGAAGGGTATGTCTGCAAAAATCTCAGTCTGCACTCCAAGATTTTGTACAGTTTT TGCTGTTTCAAAAGGAAAATTGTCCATTCGGCAATCAGACATGCAGTATGAAGGAAGCATTAAAGATGACATTAGTGATA CCAGTTTTTCCTCCGGCAGCTCATCAAATTATACTTCCACCACTCAGACAGACTCTGGATCAATTGGATCATATCCTGGT TTACGTTCCTCGCTGCCAACACAGAGATTTCAAGCTCTTTCAAGTATAAATCAGAGCCTTCTAAGTACAACAACTAGTAT AAATGAAACTAATCATTCTAGAGGCCAATCTCTTGATTTTGGAAGAGAAAATGCTGCTCCAAGTTCTGCTAGAAACTCAG ATACTGATCGTGCTCTGAGTCGGGTCTCTAGTTGCAGAAGCTTTATTTCAGATACTGAATCTTGGATTTATGAACAAAGT TCTTGCAAGGATGTGTCACTAGCAGATAAATTTCCATCACCAAATAGGCAGGCAAATTTTAACCTTGAGCTGGAAAAGTT GAGAATTGAACTAAGACATGCCCAAGGAATGCATGCTGTAGCTCAAAGTGAGAACATTGATGCATCAAGAAAGCTTAATG AACTCAGCAAAAGAAGATCCGAAGAATCCATGAAAATGAAAGAGATTATTTCTAAGGAGGAGGTGGCCGAGGAGTTAGCA AGATACGAAATAGACAAATATGATGCTGCAGTAAGAGAATCTGCTTATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGA AAGAAAAGAAACGGAGTTGAAAGCTATACGTGCTGCCAAAGAGAAAGATAAGCTGGAGGGTGCTCTAAGTGGTTCTGTTC TCCAGTACCGAAAGTTTACCTGGGACGAAATAGTTTCAGCTACTTCATCTTTTTCTGAAGATCTGAAAATTGGAATGGGA GCATATGGAGTGGTGTATAAGTGTACTTTGTATCATACAACTGTTGCTGTTAAAGTTCTCCACCCTAATGGAAACCGCCA AAGTAAGCAATTCCAGCAGGAGCTGGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTC CTGATCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAGCTTGGAGGACAGACTACTCCAAAAGAACAGTACTATC CCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAAGTTGCATCAGCTCTTGCCTTTCTTCACAGCACAGAACCAGA ACCTATCATCCATCGTGACATGAAACCGGCAAACATCTTGCTCGGTCGGAACCTTGTCAGTAAGATTGGTGACATAGGCC TTTCTACAGTCCTCAGTTCAGATAGTTTATCTACCATGTATAAGGACTCAGAGCCTGTTGGGACACTCTGCTACATCGAT CCTGAGTATCAAAGGACTGGATTAATATCCCCAAAGTCTGATGTTTATGCTTTTGGAATAGTGATCTTACAGTTATTGAC AGCAAAATCAGCAATGGCAGTTACTCATGTGGTTGAAACAGCTATTAATGATGGGAAATTAACAAATGTGTTGGATCCAA AGGCAGGGTCATGGCCATTTCAAGAGACACTAGAATTAGCTCGGTTAGGACTGAGCTGTGCAGAGCTTCGGCGTAGAGAC CGGCCCGATTTAAAAGATCAGGTGCTTCCAACCCTGGAGAGATTGAAAGAAGTTGCTGCTAGAGCTCAACATTCTTCTTC AATTGTTACTATTAAATCCAGACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGCGTTG CAGCGGATGGATATACGTATGATCGCAAAGCAATTGAAAAGTGGCTTCAAGAGAATGATAATTCACCAATGACAAATATG GCTTTGCCTCATAAGAATCTAATTCCTAATTACGCACTTGTGTCAGCAATTTTGGAGTGGAAGTCCAGTGAAATATGA
Protein sequence (LotjaGi3g1v0099200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIFKLIHVHAGIKGVPTPTTAYKQEVEMQTNQMLLPFKRMCEQRKVHVNVAVIESDDVATAVAEEVAKDAITKLVVGAS SRGLFKSKQKGMSAKISVCTPRFCTVFAVSKGKLSIRQSDMQYEGSIKDDISDTSFSSGSSSNYTSTTQTDSGSIGSYPG LRSSLPTQRFQALSSINQSLLSTTTSINETNHSRGQSLDFGRENAAPSSARNSDTDRALSRVSSCRSFISDTESWIYEQS SCKDVSLADKFPSPNRQANFNLELEKLRIELRHAQGMHAVAQSENIDASRKLNELSKRRSEESMKMKEIISKEEVAEELA RYEIDKYDAAVRESAYLKECAEREAAERKETELKAIRAAKEKDKLEGALSGSVLQYRKFTWDEIVSATSSFSEDLKIGMG AYGVVYKCTLYHTTVAVKVLHPNGNRQSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDRLLQKNSTI PIPWFERFRIAWEVASALAFLHSTEPEPIIHRDMKPANILLGRNLVSKIGDIGLSTVLSSDSLSTMYKDSEPVGTLCYID PEYQRTGLISPKSDVYAFGIVILQLLTAKSAMAVTHVVETAINDGKLTNVLDPKAGSWPFQETLELARLGLSCAELRRRD RPDLKDQVLPTLERLKEVAARAQHSSSIVTIKSRPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLQENDNSPMTNM ALPHKNLIPNYALVSAILEWKSSEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 742 | 741 | 0.0 | – | |
| PANTHER | 2 | 742 | 741 | 0.0 | – | |
| CDD | 4 | 112 | 109 | 4.12223E-31 | – | |
| MobiDBLite | 132 | 160 | 29 | - | – | |
| MobiDBLite | 184 | 217 | 34 | - | – | |
| Coils | 264 | 284 | 21 | - | – | |
| Coils | 346 | 368 | 23 | - | – | |
| Gene3D | 361 | 463 | 103 | 2.7E-24 | – | |
| SUPERFAMILY | 373 | 646 | 274 | 1.75E-66 | ||
| SMART | 391 | 652 | 262 | 3.7E-27 | ||
| ProSiteProfiles | 391 | 652 | 262 | 33.573 | ||
| Pfam | 393 | 642 | 250 | 1.9E-40 | ||
| ProSitePatterns | 397 | 418 | 22 | - | ||
| Gene3D | 464 | 674 | 211 | 2.5E-46 | – | |
| ProSitePatterns | 509 | 521 | 13 | - | ||
| SUPERFAMILY | 670 | 742 | 73 | 1.85E-24 | – | |
| ProSiteProfiles | 674 | 745 | 72 | 33.27 | ||
| Gene3D | 675 | 744 | 70 | 2.5E-27 | ||
| Pfam | 676 | 742 | 67 | 4.1E-19 | ||
| SMART | 678 | 740 | 63 | 3.3E-29 | ||
| CDD | 679 | 719 | 41 | 7.74598E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi3g1v0099200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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