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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0105400 |
| Transcript ID | LotjaGi3g1v0105400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A0A151QZ69|A0A151QZ69_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi3g1v0105400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13074827..13079665) extracted from Lotus japonicus Gifu genome v1.2.
CTCGACAACATAACCTAAACTCCCGTTTAGACTAGCACTAAAACCAAATTATTCCCCTTAACACAGAATTATTATTTTTA CAACTTTACTAGACAATAAAACCAAATCTCACTTAATCATGATATGAGAGGGACAAGAACTTAGTTAAGTCTTTTATCTA ACTATTTGACTAATGGTATGGACCAAAATGCAAGTTTGTTTCATAGATTTGTGTCCATGAAATGAAACCAGAGTCGAAAC AACATTTTCAAAAAAGAAGGCCGTAATGAGCAGACTACAACAACAAGCTCACTGACGACGACGAAGTCATCTTCATCCTC TTAATCTTCCCTCTTCGGTCTCTTTTCAATGGTTGAAGAGAGTGAAGCAGAAGAAAAGTAAGTACTTAGAGTTCAAGGTT TCTCCTTTCATTGCTTTGCTACCGATTCTGATTTCACTTTTTTTGTACTTGTTGCAGCCCCTTGGTTGTATCGGTGCCAA TACAAGATATAGATGAGTAAGTACATGTTCCAAATTTATGCTTGTTTTTATTGTTTATAGTTCAATTTCTTAGAGCATAT CCAATGCTAGGTTCTTAGTTGTTAGGCGCACTATTTATAATTCATGTGGACCCGTAATGCCACATATGCTTAAGCAACTA TTTACAGATTTTGCTCCAATCATAAGCTAATAGAGATGCTCTTAGTCTTACTGTGTTTTCACATATGCAATTGATTATTT TTAGAGTTTAATGGATATGCATCCTCTGTGTAAAAAGTTTTACATCGATAACAACACATAATGCCACGTAGGAGAAATAA TGACATTCATTTTAAATTTTAATTAAAAAATAAATATTTTCTGATGTAGCTGAATTTAATTGAATGACTGTGTAAATAAA GTTTATATTGACAATAGTGCACACACCTTTAATTCTTATTTTTATGCTTATAGAGGGATCATCTCTGTGTGGTAAAAGGG AATTTCTAAGGAAGCTAAAAAATTGAGAAGGACCCACTTTCTAGTACTAAGAGGTGTCTGACCTCATGCTCTTGAGTCTT GGCAGTTTCTGAGCTACTCGACTCAAGTTTTAGCCTGTTTGGATGCAGATCAAAGAGCACTTGTTGGAGCTTATTCAATG CAGTTTTGTAGTGGATAAGCTCAAGTAAGTGCTCTTTAGTTCATATCCAAACAGGAAGTTTTGACAATCCAGCAGCACAT TTAAGATCATATCTGTTACACTAATAAGTGTGGTTAATTCCTTTTCCAGCTCTGTGCTTTGCTATTAATGTTTGTAATGA AAGCAAGTTTGTCAGAAAAAAAATTCTTTCCTTGTAAGTATCAACTATCAAGTCAAAGCCATTTTTTCTCAACTAAAAAG TTGTTGTTGTCCCCTCCCCCTCAAAAAAGCAAGCCATAGTAAGGTCATGGCATGAAAGTTACTCACAGGATGCTTCATAA TTCATATGCATTCTTACTGTCACACTCTCTCATTGACTCTTCTAATCCCTTTAGCTGAAAGAGATGAAAAATATTTGTTG TAGAGGTAGAAAACTTCAGGAGTATAGAAATACAACGAATGCATAAACCATACTGTTTTTCTTAATGGGAATGAAGTGAA AAAGAAGCTGGATTCTTGCTTGGTTTGGACTTATGATGATTTATTTTCTTTGGTATCTGTTATGCATCTCCTCTAAGGTG GATAATTTTGGTATGAAGTTCGTACTCAGGAAGGCTTGTCTTGATAATTCTGTTATGAAGCAACAACTCTGTTCTCTTTA TCTTTCTTTCATTTTTTCTTAATACTTTCTGCAAGAAAAACCGTACAGGGAATTTTGGAGGTTGAATTCACTTCCAATGT CTAGAAGATCATTCATAGAAAATGGCAATCCATCCACTACCATTTTAGATGACACTAACGTTCAAGTTGTAATATCATCC GATCGGGTTTCCAGTTCCACACAAAGCCAGAAGCCATATCCAGGGGAAGCTACTCTCAACGCAGAGTTGGAAGAGTGTAA GTCACACTTGAAACTAATACTTTAACAAGCTTATATATACTCTTGATGAACATATTAACACAAACTATTGCAACCATGTA TGCAGTAATTTACACAGAAGACTTCAAAAGCACTAACTAGTCATGTAGCTTTTTTCCCATTACATGGCCTATTCAAAGAA ATTTATCTTCACACACGAAAAACCTCACAAAATATTTTCAAAATTAATGTGAAGTTCATTATGCATGGAAAAATTTATTA GGAAGGCATTTGTACATAATCACCACAGTAGGCTAATGATATCTATTGTTGCTTGTATACTATATGCCATTTCTTCTGTA ATTTCACCTTACATGCCACAATTGGCTGTAAATAAGTTTGATTAAAATAGATAAAACCAGAAAAGAAAAAGGAAACTGAT GCCAATGACTTTGCAGAGTCTAGAGTGGCACCATAAACAAGATAAGATTTTTGTATTGCAGGTTTCTTAAAACAAGAGCT GTGTTCACATGCACTCCAAAATTTGTGGCAACTAGCAAGATCCATTTTTGAAGAGTTTCCTGATCTGGTACGCATTCCAT TGACTGATAGTGGAGATACAGCTCTTCATGTTGCAGTGAGCGCAAAAAGCACTTTGTTTGTGAAAAAGCTGGTTGAGTTA GCACACATGACCCCGGAAGACATGGAAATACTGAATGCAGAAGGCAACACTGCGTTTTGCATGGCTGCAATTGCAGGGAA TAGTGAATTATTACAAATTATGATTAAAAAGAATGAAAAGTTGCCAGTGGTTTCTGGGCATGATGGGATGCTTCCAGTTC ACGTGGCTACTTTAGGTTGCTACCATGAAACTGTTCAAGATCTATCCTCTGACAGGCTCCTTCATTACATGGATTTCAAG GATATCAAGAGATTATTTTTCATGGCCATTAGTAGCTACATGTATGGTAAGACTACGGAACTTGATTCTCCATTTTGTAG AAGAAAAACAATGCTAACTGCAATATCATCTTGAAATGAATAATGAGTAGTACAGTAAAGAGTATTGCTTTTCTTTTCAA AATAATAAATAGTATTGCTAACCTGTTTAATGGACATTTCACCTTACTCTAATATTCTGTGTGTTCCTATGTTTCATCTT GGCTCTAACATGCTTTATATGGTTCAAACTATATAACAGATGTGGCAACGAAATTAGTCGAGAAATATCCAAAGCCTTTG AGCATTGCAAGAGATGATGAAGAGAATCTAACAGCTTTGCATATGCTGGCGCGAAAGCCTTTAGAAGAATTTTGTTAGTT CTTCATTCTTTCATATAGCTATTTTTCTTCCTTTCTTTTTGAAATTTATATTATTGGCTTATTGAAATTATATATAAAAA TTTGTATAAAGTGCTTTTAGAAGTTCTATAATTTTTGCCTGTTAAACATTTCTTCTCCTTGACCTTGACCTTGACCTATT CAACTACACTCATTGCAAGACATGCAAGATAACAACTATGAAGAAGGTTCATCAAGACAAGGTCATCAACTGAGATTGCT GCGGAAGTTATGGGCACAAGTTAGACAATTAGAATACAAAAATAGATTGGAGTTGATAATTGAACCTTCAGTAGTACTGT TTGATGCAGTAAAATCAGGAAATGTTGATGTTGTGAAACAGCTTCTTTACATGAACCGTGAACTGTTGATTATAAAGGAC CCAAAAAATGGACAAAGCTTACTGCACATTGCTGTTTTATTTCGACAAAATAGCATCTTTGACTTCATACTTAGTATGGG GAATGCAAACCTTATAATACGAGCCGTGGATAAAGATCGTAACAATGTTCTACACCTTGCTGCACGTCAACTAGAAGAAG CATCATTAAATCTCAGACCAGACATTCGAATGCGAAGTGAGGTGGCGTGGTTTAAGGTAAACTTGCTCATTCTTATTAAT TGAAGTGTTCTTCTTTTCTTTATGTGTTACCATTATTAACATAAACTCTTTTGTTAATCATACACATATGTAGGGAGTGG AGCAGAGAGTTCCTCCTGAGCTAATGACGATGAGAAACAAACATGGCAAGACACCAAATGATATGTTTTATGCAAATCAT AAAAGGCTATCTGACGAAGTTAAAGATACAGCGAAAGGAGTATCCAACTCTGGTATGGTTGTGGCAACACTTATTGTTGC TGTTTCTTTTGCTGCAGCTCTGACTACTCCAGGTGATAAGACAAATGCTTGGTTTACTGTATTCATCATGGCAAATGCAG TTGCATTATTCACTTCGTCTTTATCTCTTGTCTCTTTCTTGTCAATATTCACTTCATCAAGATTCAGAGAAAGAGACTTC ATCATCTCACTATATCCAAGCTTGAAAATTGGGAAAATGTTGCTGCTTATCTCTGTGGTCACTATGGTCATAGCTTTTGC TGCAGCTTCCTTCTTGATTTTTGATCGCGTACATAAGTGGACTGCATATGTAGTGGCTTCATTAGGGCTTTTCACAATAA TTATGTTTTTAGTCTTAATTTTATACATAAGCGGAGTGACTGCAAATTAGTTGTGAAAAGCTGTTATTTAGCTAGGAAAT AGCTCTGTCGCTACTTGCAGCTAATTGGCAAGCATTTCACAGCCAATTACCTGATATTTCATTACACCACCAATCCTCAA TATATGATCATGTATCCAGTGAGTTACTAGCTAGGAACACTGGCAGGTGGAATGAATTCTGTGAATAGTCTATTCACTAA TAATCATGTTTTGTAATTTATGCTTGTGAAATAATCAAGGTTGTCCTTGAATTTGTGACTATTGTGTATAAAATATATTT TGAGTGTATTTTTTTGTGTGCAAATTGAGTGGATTTGAC
CDS sequence (LotjaGi3g1v0105400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAGAAGATCATTCATAGAAAATGGCAATCCATCCACTACCATTTTAGATGACACTAACGTTCAAGTTGTAATATC ATCCGATCGGGTTTCCAGTTCCACACAAAGCCAGAAGCCATATCCAGGGGAAGCTACTCTCAACGCAGAGTTGGAAGAGT GTTTCTTAAAACAAGAGCTGTGTTCACATGCACTCCAAAATTTGTGGCAACTAGCAAGATCCATTTTTGAAGAGTTTCCT GATCTGGTACGCATTCCATTGACTGATAGTGGAGATACAGCTCTTCATGTTGCAGTGAGCGCAAAAAGCACTTTGTTTGT GAAAAAGCTGGTTGAGTTAGCACACATGACCCCGGAAGACATGGAAATACTGAATGCAGAAGGCAACACTGCGTTTTGCA TGGCTGCAATTGCAGGGAATAGTGAATTATTACAAATTATGATTAAAAAGAATGAAAAGTTGCCAGTGGTTTCTGGGCAT GATGGGATGCTTCCAGTTCACGTGGCTACTTTAGGTTGCTACCATGAAACTGTTCAAGATCTATCCTCTGACAGGCTCCT TCATTACATGGATTTCAAGGATATCAAGAGATTATTTTTCATGGCCATTAGTAGCTACATGTATGATGTGGCAACGAAAT TAGTCGAGAAATATCCAAAGCCTTTGAGCATTGCAAGAGATGATGAAGAGAATCTAACAGCTTTGCATATGCTGGCGCGA AAGCCTTTAGAAGAATTTTACATGCAAGATAACAACTATGAAGAAGGTTCATCAAGACAAGGTCATCAACTGAGATTGCT GCGGAAGTTATGGGCACAAGTTAGACAATTAGAATACAAAAATAGATTGGAGTTGATAATTGAACCTTCAGTAGTACTGT TTGATGCAGTAAAATCAGGAAATGTTGATGTTGTGAAACAGCTTCTTTACATGAACCGTGAACTGTTGATTATAAAGGAC CCAAAAAATGGACAAAGCTTACTGCACATTGCTGTTTTATTTCGACAAAATAGCATCTTTGACTTCATACTTAGTATGGG GAATGCAAACCTTATAATACGAGCCGTGGATAAAGATCGTAACAATGTTCTACACCTTGCTGCACGTCAACTAGAAGAAG CATCATTAAATCTCAGACCAGACATTCGAATGCGAAGTGAGGTGGCGTGGTTTAAGGGAGTGGAGCAGAGAGTTCCTCCT GAGCTAATGACGATGAGAAACAAACATGGCAAGACACCAAATGATATGTTTTATGCAAATCATAAAAGGCTATCTGACGA AGTTAAAGATACAGCGAAAGGAGTATCCAACTCTGGTATGGTTGTGGCAACACTTATTGTTGCTGTTTCTTTTGCTGCAG CTCTGACTACTCCAGGTGATAAGACAAATGCTTGGTTTACTGTATTCATCATGGCAAATGCAGTTGCATTATTCACTTCG TCTTTATCTCTTGTCTCTTTCTTGTCAATATTCACTTCATCAAGATTCAGAGAAAGAGACTTCATCATCTCACTATATCC AAGCTTGAAAATTGGGAAAATGTTGCTGCTTATCTCTGTGGTCACTATGGTCATAGCTTTTGCTGCAGCTTCCTTCTTGA TTTTTGATCGCGTACATAAGTGGACTGCATATGTAGTGGCTTCATTAGGGCTTTTCACAATAATTATGTTTTTAGTCTTA ATTTTATACATAAGCGGAGTGACTGCAAATTAG
Protein sequence (LotjaGi3g1v0105400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRRSFIENGNPSTTILDDTNVQVVISSDRVSSSTQSQKPYPGEATLNAELEECFLKQELCSHALQNLWQLARSIFEEFP DLVRIPLTDSGDTALHVAVSAKSTLFVKKLVELAHMTPEDMEILNAEGNTAFCMAAIAGNSELLQIMIKKNEKLPVVSGH DGMLPVHVATLGCYHETVQDLSSDRLLHYMDFKDIKRLFFMAISSYMYDVATKLVEKYPKPLSIARDDEENLTALHMLAR KPLEEFYMQDNNYEEGSSRQGHQLRLLRKLWAQVRQLEYKNRLELIIEPSVVLFDAVKSGNVDVVKQLLYMNRELLIIKD PKNGQSLLHIAVLFRQNSIFDFILSMGNANLIIRAVDKDRNNVLHLAARQLEEASLNLRPDIRMRSEVAWFKGVEQRVPP ELMTMRNKHGKTPNDMFYANHKRLSDEVKDTAKGVSNSGMVVATLIVAVSFAAALTTPGDKTNAWFTVFIMANAVALFTS SLSLVSFLSIFTSSRFRERDFIISLYPSLKIGKMLLLISVVTMVIAFAAASFLIFDRVHKWTAYVVASLGLFTIIMFLVL ILYISGVTAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 438 | 438 | - | – | |
| PANTHER | 46 | 560 | 515 | 3.5E-72 | – | |
| PANTHER | 46 | 560 | 515 | 3.5E-72 | – | |
| SUPERFAMILY | 64 | 242 | 179 | 3.42E-13 | ||
| Gene3D | 84 | 247 | 164 | 5.4E-14 | ||
| SMART | 90 | 120 | 31 | 49.0 | ||
| ProSiteProfiles | 90 | 181 | 92 | 14.212 | ||
| SMART | 127 | 156 | 30 | 1.0 | ||
| SUPERFAMILY | 200 | 369 | 170 | 8.95E-9 | ||
| Gene3D | 250 | 426 | 177 | 1.2E-9 | ||
| ProSiteProfiles | 288 | 369 | 82 | 10.498 | ||
| SMART | 288 | 317 | 30 | 1300.0 | ||
| Pfam | 293 | 370 | 78 | 2.1E-6 | ||
| SMART | 323 | 351 | 29 | 61.0 | ||
| TMHMM | 434 | 456 | 23 | - | – | |
| Pfam | 435 | 533 | 99 | 1.5E-10 | ||
| Phobius | 439 | 458 | 20 | - | – | |
| Phobius | 459 | 463 | 5 | - | – | |
| Phobius | 464 | 493 | 30 | - | – | |
| TMHMM | 469 | 491 | 23 | - | – | |
| Phobius | 494 | 513 | 20 | - | – | |
| TMHMM | 512 | 534 | 23 | - | – | |
| Phobius | 514 | 535 | 22 | - | – | |
| Phobius | 536 | 540 | 5 | - | – | |
| Phobius | 541 | 564 | 24 | - | – | |
| TMHMM | 544 | 566 | 23 | - | – | |
| Phobius | 565 | 570 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0105400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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