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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0105400 |
| Transcript ID | LotjaGi3g1v0105400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A0A151QZ69|A0A151QZ69_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi3g1v0105400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13074827..13079665) extracted from Lotus japonicus Gifu genome v1.2.
CTCGACAACATAACCTAAACTCCCGTTTAGACTAGCACTAAAACCAAATTATTCCCCTTAACACAGAATTATTATTTTTA CAACTTTACTAGACAATAAAACCAAATCTCACTTAATCATGATATGAGAGGGACAAGAACTTAGTTAAGTCTTTTATCTA ACTATTTGACTAATGGTATGGACCAAAATGCAAGTTTGTTTCATAGATTTGTGTCCATGAAATGAAACCAGAGTCGAAAC AACATTTTCAAAAAAGAAGGCCGTAATGAGCAGACTACAACAACAAGCTCACTGACGACGACGAAGTCATCTTCATCCTC TTAATCTTCCCTCTTCGGTCTCTTTTCAATGGTTGAAGAGAGTGAAGCAGAAGAAAAGTAAGTACTTAGAGTTCAAGGTT TCTCCTTTCATTGCTTTGCTACCGATTCTGATTTCACTTTTTTTGTACTTGTTGCAGCCCCTTGGTTGTATCGGTGCCAA TACAAGATATAGATGAGTAAGTACATGTTCCAAATTTATGCTTGTTTTTATTGTTTATAGTTCAATTTCTTAGAGCATAT CCAATGCTAGGTTCTTAGTTGTTAGGCGCACTATTTATAATTCATGTGGACCCGTAATGCCACATATGCTTAAGCAACTA TTTACAGATTTTGCTCCAATCATAAGCTAATAGAGATGCTCTTAGTCTTACTGTGTTTTCACATATGCAATTGATTATTT TTAGAGTTTAATGGATATGCATCCTCTGTGTAAAAAGTTTTACATCGATAACAACACATAATGCCACGTAGGAGAAATAA TGACATTCATTTTAAATTTTAATTAAAAAATAAATATTTTCTGATGTAGCTGAATTTAATTGAATGACTGTGTAAATAAA GTTTATATTGACAATAGTGCACACACCTTTAATTCTTATTTTTATGCTTATAGAGGGATCATCTCTGTGTGGTAAAAGGG AATTTCTAAGGAAGCTAAAAAATTGAGAAGGACCCACTTTCTAGTACTAAGAGGTGTCTGACCTCATGCTCTTGAGTCTT GGCAGTTTCTGAGCTACTCGACTCAAGTTTTAGCCTGTTTGGATGCAGATCAAAGAGCACTTGTTGGAGCTTATTCAATG CAGTTTTGTAGTGGATAAGCTCAAGTAAGTGCTCTTTAGTTCATATCCAAACAGGAAGTTTTGACAATCCAGCAGCACAT TTAAGATCATATCTGTTACACTAATAAGTGTGGTTAATTCCTTTTCCAGCTCTGTGCTTTGCTATTAATGTTTGTAATGA AAGCAAGTTTGTCAGAAAAAAAATTCTTTCCTTGTAAGTATCAACTATCAAGTCAAAGCCATTTTTTCTCAACTAAAAAG TTGTTGTTGTCCCCTCCCCCTCAAAAAAGCAAGCCATAGTAAGGTCATGGCATGAAAGTTACTCACAGGATGCTTCATAA TTCATATGCATTCTTACTGTCACACTCTCTCATTGACTCTTCTAATCCCTTTAGCTGAAAGAGATGAAAAATATTTGTTG TAGAGGTAGAAAACTTCAGGAGTATAGAAATACAACGAATGCATAAACCATACTGTTTTTCTTAATGGGAATGAAGTGAA AAAGAAGCTGGATTCTTGCTTGGTTTGGACTTATGATGATTTATTTTCTTTGGTATCTGTTATGCATCTCCTCTAAGGTG GATAATTTTGGTATGAAGTTCGTACTCAGGAAGGCTTGTCTTGATAATTCTGTTATGAAGCAACAACTCTGTTCTCTTTA TCTTTCTTTCATTTTTTCTTAATACTTTCTGCAAGAAAAACCGTACAGGGAATTTTGGAGGTTGAATTCACTTCCAATGT CTAGAAGATCATTCATAGAAAATGGCAATCCATCCACTACCATTTTAGATGACACTAACGTTCAAGTTGTAATATCATCC GATCGGGTTTCCAGTTCCACACAAAGCCAGAAGCCATATCCAGGGGAAGCTACTCTCAACGCAGAGTTGGAAGAGTGTAA GTCACACTTGAAACTAATACTTTAACAAGCTTATATATACTCTTGATGAACATATTAACACAAACTATTGCAACCATGTA TGCAGTAATTTACACAGAAGACTTCAAAAGCACTAACTAGTCATGTAGCTTTTTTCCCATTACATGGCCTATTCAAAGAA ATTTATCTTCACACACGAAAAACCTCACAAAATATTTTCAAAATTAATGTGAAGTTCATTATGCATGGAAAAATTTATTA GGAAGGCATTTGTACATAATCACCACAGTAGGCTAATGATATCTATTGTTGCTTGTATACTATATGCCATTTCTTCTGTA ATTTCACCTTACATGCCACAATTGGCTGTAAATAAGTTTGATTAAAATAGATAAAACCAGAAAAGAAAAAGGAAACTGAT GCCAATGACTTTGCAGAGTCTAGAGTGGCACCATAAACAAGATAAGATTTTTGTATTGCAGGTTTCTTAAAACAAGAGCT GTGTTCACATGCACTCCAAAATTTGTGGCAACTAGCAAGATCCATTTTTGAAGAGTTTCCTGATCTGGTACGCATTCCAT TGACTGATAGTGGAGATACAGCTCTTCATGTTGCAGTGAGCGCAAAAAGCACTTTGTTTGTGAAAAAGCTGGTTGAGTTA GCACACATGACCCCGGAAGACATGGAAATACTGAATGCAGAAGGCAACACTGCGTTTTGCATGGCTGCAATTGCAGGGAA TAGTGAATTATTACAAATTATGATTAAAAAGAATGAAAAGTTGCCAGTGGTTTCTGGGCATGATGGGATGCTTCCAGTTC ACGTGGCTACTTTAGGTTGCTACCATGAAACTGTTCAAGATCTATCCTCTGACAGGCTCCTTCATTACATGGATTTCAAG GATATCAAGAGATTATTTTTCATGGCCATTAGTAGCTACATGTATGGTAAGACTACGGAACTTGATTCTCCATTTTGTAG AAGAAAAACAATGCTAACTGCAATATCATCTTGAAATGAATAATGAGTAGTACAGTAAAGAGTATTGCTTTTCTTTTCAA AATAATAAATAGTATTGCTAACCTGTTTAATGGACATTTCACCTTACTCTAATATTCTGTGTGTTCCTATGTTTCATCTT GGCTCTAACATGCTTTATATGGTTCAAACTATATAACAGATGTGGCAACGAAATTAGTCGAGAAATATCCAAAGCCTTTG AGCATTGCAAGAGATGATGAAGAGAATCTAACAGCTTTGCATATGCTGGCGCGAAAGCCTTTAGAAGAATTTTGTTAGTT CTTCATTCTTTCATATAGCTATTTTTCTTCCTTTCTTTTTGAAATTTATATTATTGGCTTATTGAAATTATATATAAAAA TTTGTATAAAGTGCTTTTAGAAGTTCTATAATTTTTGCCTGTTAAACATTTCTTCTCCTTGACCTTGACCTTGACCTATT CAACTACACTCATTGCAAGACATGCAAGATAACAACTATGAAGAAGGTTCATCAAGACAAGGTCATCAACTGAGATTGCT GCGGAAGTTATGGGCACAAGTTAGACAATTAGAATACAAAAATAGATTGGAGTTGATAATTGAACCTTCAGTAGTACTGT TTGATGCAGTAAAATCAGGAAATGTTGATGTTGTGAAACAGCTTCTTTACATGAACCGTGAACTGTTGATTATAAAGGAC CCAAAAAATGGACAAAGCTTACTGCACATTGCTGTTTTATTTCGACAAAATAGCATCTTTGACTTCATACTTAGTATGGG GAATGCAAACCTTATAATACGAGCCGTGGATAAAGATCGTAACAATGTTCTACACCTTGCTGCACGTCAACTAGAAGAAG CATCATTAAATCTCAGACCAGACATTCGAATGCGAAGTGAGGTGGCGTGGTTTAAGGTAAACTTGCTCATTCTTATTAAT TGAAGTGTTCTTCTTTTCTTTATGTGTTACCATTATTAACATAAACTCTTTTGTTAATCATACACATATGTAGGGAGTGG AGCAGAGAGTTCCTCCTGAGCTAATGACGATGAGAAACAAACATGGCAAGACACCAAATGATATGTTTTATGCAAATCAT AAAAGGCTATCTGACGAAGTTAAAGATACAGCGAAAGGAGTATCCAACTCTGGTATGGTTGTGGCAACACTTATTGTTGC TGTTTCTTTTGCTGCAGCTCTGACTACTCCAGGTGATAAGACAAATGCTTGGTTTACTGTATTCATCATGGCAAATGCAG TTGCATTATTCACTTCGTCTTTATCTCTTGTCTCTTTCTTGTCAATATTCACTTCATCAAGATTCAGAGAAAGAGACTTC ATCATCTCACTATATCCAAGCTTGAAAATTGGGAAAATGTTGCTGCTTATCTCTGTGGTCACTATGGTCATAGCTTTTGC TGCAGCTTCCTTCTTGATTTTTGATCGCGTACATAAGTGGACTGCATATGTAGTGGCTTCATTAGGGCTTTTCACAATAA TTATGTTTTTAGTCTTAATTTTATACATAAGCGGAGTGACTGCAAATTAGTTGTGAAAAGCTGTTATTTAGCTAGGAAAT AGCTCTGTCGCTACTTGCAGCTAATTGGCAAGCATTTCACAGCCAATTACCTGATATTTCATTACACCACCAATCCTCAA TATATGATCATGTATCCAGTGAGTTACTAGCTAGGAACACTGGCAGGTGGAATGAATTCTGTGAATAGTCTATTCACTAA TAATCATGTTTTGTAATTTATGCTTGTGAAATAATCAAGGTTGTCCTTGAATTTGTGACTATTGTGTATAAAATATATTT TGAGTGTATTTTTTTGTGTGCAAATTGAGTGGATTTGAC
CDS sequence (LotjaGi3g1v0105400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGAAGAGAGTGAAGCAGAAGAAAACCCCTTGGTTGTATCGGTGCCAATACAAGATATAGATGAGGAATTTTGGAG GTTGAATTCACTTCCAATGTCTAGAAGATCATTCATAGAAAATGGCAATCCATCCACTACCATTTTAGATGACACTAACG TTCAAGTTGTAATATCATCCGATCGGGTTTCCAGTTCCACACAAAGCCAGAAGCCATATCCAGGGGAAGCTACTCTCAAC GCAGAGTTGGAAGAGTGTTTCTTAAAACAAGAGCTGTGTTCACATGCACTCCAAAATTTGTGGCAACTAGCAAGATCCAT TTTTGAAGAGTTTCCTGATCTGGTACGCATTCCATTGACTGATAGTGGAGATACAGCTCTTCATGTTGCAGTGAGCGCAA AAAGCACTTTGTTTGTGAAAAAGCTGGTTGAGTTAGCACACATGACCCCGGAAGACATGGAAATACTGAATGCAGAAGGC AACACTGCGTTTTGCATGGCTGCAATTGCAGGGAATAGTGAATTATTACAAATTATGATTAAAAAGAATGAAAAGTTGCC AGTGGTTTCTGGGCATGATGGGATGCTTCCAGTTCACGTGGCTACTTTAGGTTGCTACCATGAAACTGTTCAAGATCTAT CCTCTGACAGGCTCCTTCATTACATGGATTTCAAGGATATCAAGAGATTATTTTTCATGGCCATTAGTAGCTACATGTAT GATGTGGCAACGAAATTAGTCGAGAAATATCCAAAGCCTTTGAGCATTGCAAGAGATGATGAAGAGAATCTAACAGCTTT GCATATGCTGGCGCGAAAGCCTTTAGAAGAATTTTACATGCAAGATAACAACTATGAAGAAGGTTCATCAAGACAAGGTC ATCAACTGAGATTGCTGCGGAAGTTATGGGCACAAGTTAGACAATTAGAATACAAAAATAGATTGGAGTTGATAATTGAA CCTTCAGTAGTACTGTTTGATGCAGTAAAATCAGGAAATGTTGATGTTGTGAAACAGCTTCTTTACATGAACCGTGAACT GTTGATTATAAAGGACCCAAAAAATGGACAAAGCTTACTGCACATTGCTGTTTTATTTCGACAAAATAGCATCTTTGACT TCATACTTAGTATGGGGAATGCAAACCTTATAATACGAGCCGTGGATAAAGATCGTAACAATGTTCTACACCTTGCTGCA CGTCAACTAGAAGAAGCATCATTAAATCTCAGACCAGACATTCGAATGCGAAGTGAGGTGGCGTGGTTTAAGGGAGTGGA GCAGAGAGTTCCTCCTGAGCTAATGACGATGAGAAACAAACATGGCAAGACACCAAATGATATGTTTTATGCAAATCATA AAAGGCTATCTGACGAAGTTAAAGATACAGCGAAAGGAGTATCCAACTCTGGTATGGTTGTGGCAACACTTATTGTTGCT GTTTCTTTTGCTGCAGCTCTGACTACTCCAGGTGATAAGACAAATGCTTGGTTTACTGTATTCATCATGGCAAATGCAGT TGCATTATTCACTTCGTCTTTATCTCTTGTCTCTTTCTTGTCAATATTCACTTCATCAAGATTCAGAGAAAGAGACTTCA TCATCTCACTATATCCAAGCTTGAAAATTGGGAAAATGTTGCTGCTTATCTCTGTGGTCACTATGGTCATAGCTTTTGCT GCAGCTTCCTTCTTGATTTTTGATCGCGTACATAAGTGGACTGCATATGTAGTGGCTTCATTAGGGCTTTTCACAATAAT TATGTTTTTAGTCTTAATTTTATACATAAGCGGAGTGACTGCAAATTAG
Protein sequence (LotjaGi3g1v0105400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEESEAEENPLVVSVPIQDIDEEFWRLNSLPMSRRSFIENGNPSTTILDDTNVQVVISSDRVSSSTQSQKPYPGEATLN AELEECFLKQELCSHALQNLWQLARSIFEEFPDLVRIPLTDSGDTALHVAVSAKSTLFVKKLVELAHMTPEDMEILNAEG NTAFCMAAIAGNSELLQIMIKKNEKLPVVSGHDGMLPVHVATLGCYHETVQDLSSDRLLHYMDFKDIKRLFFMAISSYMY DVATKLVEKYPKPLSIARDDEENLTALHMLARKPLEEFYMQDNNYEEGSSRQGHQLRLLRKLWAQVRQLEYKNRLELIIE PSVVLFDAVKSGNVDVVKQLLYMNRELLIIKDPKNGQSLLHIAVLFRQNSIFDFILSMGNANLIIRAVDKDRNNVLHLAA RQLEEASLNLRPDIRMRSEVAWFKGVEQRVPPELMTMRNKHGKTPNDMFYANHKRLSDEVKDTAKGVSNSGMVVATLIVA VSFAAALTTPGDKTNAWFTVFIMANAVALFTSSLSLVSFLSIFTSSRFRERDFIISLYPSLKIGKMLLLISVVTMVIAFA AASFLIFDRVHKWTAYVVASLGLFTIIMFLVLILYISGVTAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 470 | 470 | - | – | |
| PANTHER | 78 | 592 | 515 | 3.5E-72 | – | |
| PANTHER | 78 | 592 | 515 | 3.5E-72 | – | |
| Gene3D | 116 | 278 | 163 | 6.1E-14 | ||
| SUPERFAMILY | 120 | 401 | 282 | 1.41E-14 | ||
| SMART | 122 | 152 | 31 | 49.0 | ||
| ProSiteProfiles | 122 | 213 | 92 | 14.212 | ||
| SMART | 159 | 188 | 30 | 1.0 | ||
| Gene3D | 300 | 459 | 160 | 1.5E-9 | ||
| SMART | 320 | 349 | 30 | 1300.0 | ||
| ProSiteProfiles | 320 | 401 | 82 | 10.498 | ||
| Pfam | 325 | 402 | 78 | 2.3E-6 | ||
| SMART | 355 | 383 | 29 | 61.0 | ||
| TMHMM | 466 | 488 | 23 | - | – | |
| Pfam | 467 | 565 | 99 | 1.6E-10 | ||
| Phobius | 471 | 490 | 20 | - | – | |
| Phobius | 491 | 495 | 5 | - | – | |
| Phobius | 496 | 525 | 30 | - | – | |
| TMHMM | 501 | 523 | 23 | - | – | |
| Phobius | 526 | 545 | 20 | - | – | |
| TMHMM | 544 | 566 | 23 | - | – | |
| Phobius | 546 | 567 | 22 | - | – | |
| Phobius | 568 | 572 | 5 | - | – | |
| Phobius | 573 | 596 | 24 | - | – | |
| TMHMM | 576 | 598 | 23 | - | – | |
| Phobius | 597 | 602 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0105400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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