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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0108000 |
| Transcript ID | LotjaGi3g1v0108000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|A0A151QV45|A0A151QV45_CAJCA Putative disease resistance RPP13-like protein 1; Found in the gene: LotjaGi3g1v0108000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13311254..13316143) extracted from Lotus japonicus Gifu genome v1.2.
CAGGGACCAGATTGACATCTTTACATATTCTGTCCTTAGTTTAAGCCTTTAATCTTCATAGTTTTCATGCCGGCATGAAA GTATCCGCCTAATATGCCAAGTGGATATGACTTTTTTTGTGGTGTGGCAGCTCATTAGTTATTTAGCATTTACCATCTTT GTGTTTGCAAACACCATATCATCATTCCGCTTCCAAGTTCTATCATCAAGAAAGAAAGAAAAAGATCATGGCAGCTGAAT TGGTGGGAGGGGCTTTTCTCTCTGCTTTGGTCCAAACCTTGTTTGAGAGAGTGGCCACTCGTGAGATGGTTGATTTCATA AGGGGAATAAAACAAGACAATGGTCCTAACCTGCTAGACAAGTTGAAGATAACACTGCGCTCAGTTGATGCTCTGGTCAA CCATGCTGAGGAGAGGCAAACCACAGATTTTCACATAAGGGAATGGCTCAATGATCTCAAGGATGCTATGTTTGAAGTTG AAGACCTTTTAGACAAGATCAGTGTATCATCTTCAAGGCAGAAAATGGAAGCTGTTTTCTTGAGCAGCACTTTTAGTAAG GTATCTGTCTCTTCACATGCTTCTTCACTTGGTGATTTCATTGAAAGGATGGAGACCAGTTTAGAAAAAATGGACAATCT TGTGAAACAAAAAGATGTTTTGGGTTTGAGGGAAGGTGCCAATCAGACACCACATAGAAATCTTCAAACAACTTCTTTAG CAGGAAAATGTTCTGTCTATGGAAGAGATGCTGATAAGGGTAATGTTATTCAACTTTTGGTTTCTGCATCAGATTATGGT ATTGGTAGTGATAAGATATGTGTGCTCCCTATAGTTGGTATGGGAGGAGTTGGGAAAACTACTCTTGCTCAATTTGTGTA CAATGATGAAAAAGTGAAGCAGCATTTTGACATCAAAGCATGGGTTTGTGTTAACCAAGAATTTGATGTCTTCAAACTAA CCAAGGCCATTCTAGAGGCAATCCCTTTAACATGTGACACAATGGATCTTAATTTACAACAGATAAAGTTGAAAGAGTTC CTTCATAACAAGAGATTCTTAATTGTTCTAGATGATGTTTGGAACGAAAGCTATACCATGTGGGAGATATTAAGGCGCCC ATTCGAATTTGGTGCTCAAGGAAGTTGTGTCCTTGTAACAACCCGCAATGAAAATGTTGCATCAGCTATGCTTACTGTTC CAAGTTACCATTTAAAACCACTAGCAGATGATGATTGTTGGTTGCTGTTTTCTGAGCATGCATTTGAAGGAGGAAGGTTT AAAAGAAGTACTGCATTGGAAGATATTGGCAGGGAAATAGTGAAAAAATGCAGGGGACTTCCATTAGCAGCAAAAGCTCT TGGGGGTCTCTTGCGGTCCAAAGTAGATTCAAGAGAATGGGTGAAGGTTCTGGAAAGCAAGATATGGGACTTTCCAAGTG ATAGGAGCAATATTCTTCCAGCTCTCATGTTGAGTTATTACTATCTTCCCTCAACTCTTAAGCGGTGTTTTGCTTATTGT TCCATATTTCCCAAAAACTACCAATTTCGAAGAAAGGAACTCGTGCGCTTGTGGATGGCAGAAGATCTGCTGCTGCATCC CAAACGGAATGGAAATGCGGAAGAACTCGGTACTGAATACTTCAACAATCTAGCATCCAGGTCATTCTTTCTTAATTCAA GTAGGAGGCGCTTTATCATGCATGATCTCATTGTTGATTTAGCTGAATTTGTCTCAGGAGATTTCTCATTGAGATTGGAG GGCAAGATGAACACTCTCCCCTCAAAAAGAACTCGCTATTTGTCATATAATTCAAAGCTCCAGCTTGATGATTTGGAGAA AATTATGGCTACATGTGAAAACCTGCGGACTTTTCTTCCATCGCAGGCTTTGTCATGTCCAAGATGTTTGAACAATGAGG CTGTGAGCAGCTTAATTTCAAAACATAAAAGTTTAAGGATCCTTTCTCTGTCACACTGTGGTAATTTGACAGCTTTACCT GATTTCTTGGGTGACTTGATACATTTACGATATCTAGACCTCAGCGCCACTCCAATCTCCAAGTTACCTGAGTCCACTTG TTCTCTGCACAAATTGGAGATTTTATTGTTGACAAACTGTTCTCATCTTGCTGAATTACCACTTCAAATAGGAAGTTTGA TCAACTTGAGGTGTTTGGATATCAGGGGAACAATAATAGGTGAAATGCCACCTCATATGGGTACTTTGACAAATCTTCAA ACCTTAACTAGATTTGTTCAGGGTAGTGGGCAAGGGTCTGGCATTGAAGAGCTGAAGAATTTTCCTTTTCTTAAGGGAAA GATCTCTATTTCAAATCTCCAAAATGTCACCTATCCACATGATGCTATGAAGGCTAATTTGTTGGGGAATATGGAACTTA ATGAATTAATGTTGATTTGGGGTACAAATGCAGATGAATCAAAAAATGTTAGAAGCCTATTGCATTGGTTGGAGCCTCCT ATGACCTTGGAAAAACTTACCATCAGAAATTATGGCAGTACATCATTCCCAGCCTGGTTAGGAGATTGTCAATTCTCAAA GTTAGTATCTCTATCCCTTAATGATTGTGCAAATTGTCTTTGTTTGCCAACACTGGGGCAATTGCCTTCCTTGAAAGCCC TCTCATTGGTGGGGTTTATGATCGTCACTCATGTTGATGGTGTGTTTTACAACAATTCTTCTATGGATGCGAAGAAATCT CAGACCCACAATACCACACCATTTAGGTGCCTTGAGAGTTTGCATTTTGAGAACATGCCTCAGTGGCAAGAATGGCTTCC TTTCGGGGAGGAAGGGAAGGAAGATGAAGATGGTGCATTTCCTTGTCTTAAACGACTCGCTATAAAAAATTGCCCAAAAC TGAAGGGCTTGAACTTGATCCAAAAGCTACCTTCCATAGAAAAGATTGTTATTACAAAATGTGAACAGCTTGTGGTTGTA GTTCCCCCAACAATCTGTGAATTGCAATTAGAATGTTGTGAGAAGGTTTCAATTCAGAGTCTACTGCCTCAACTATTGAA CCTGAAAATCAGTAGTTATAATGCAGCAGAGTCACTATTTGAGGCAATAGATAACAGAAGTTCTTGCATTGAAAAGTTGA GTATCTCAAGTTGTCCTCTCATTCAACACCTTCCTAGTAATGGCATTGCAAACACATTAAAATCACTTACCATTATAAAC TGTGAGAACATTGAGTTTCCTATGAGCCAATGCTTTCCATATCTTGAGTTCTTATGCATCAAATGGAGTTGTGATTCCCT GAGGTCTTTCATAATGGACTTGTTCCCAAACATGATCCACCTTGAAATACAAGGATGCCAGAATTTGGAGTCTCTTGTAG TCACCGGGGTGCAGTTGCAATATCTTCAATCTCTGAATTCCTTAAGGATCTGCAATTGTCCTAACTTTGAATCTTTTCCT GAAGGTGGACTCAGAGCTCCAAATATGACAAATTTACATTTGGAAAAATGTAAAAAATTGAAGTCTTTTCCGCAGCAGAT GAACAAGATGCTCCTGTCCCTCATGACTTTGAACATAAAAGAGTGTCCAGAACTTGAGTCAATTCCAGAGGGAGGTTTTC CAGATAGTCTGAACTTACTTGAGATCTTTCACTGTGCTAAACTATTTACCAACAGGAAGAACTGGGATTTGCAAAGACTG CGCTTTCTTAGAAGCTTCGCTATAGCGGGTGCATGCGAAGATGGAGAATCCTTCCCAGAAAGATGGCTGCTTCCATCCAC TCTTACATCCTTTCATATCCTTGCTCTTTGGAACTTGAAGTATCTAGATGAGGACAGCCTTCAAAAATTGACCTCTCTAG AGACTTTGGGGATTGCATGCTGCCCAAAACTTCAGTGTATGCCTGCAAAGCTTCCTTGTTCGATTTCTACCCTTCATATC GTGAGAAGTCCAAGACTTGAAGAAAGATGTAGAGGAAGGAAATCTGAAGATTGGCCCAAAATTGCTCACATTCCCATGAT ACGGATCAACAGGAAATTGCTCCAATAAGACCAAACTTGATGTGAAATTACCATATCTTATTGTCCAGGTATCTGCTGTA AAGTTCTCTATATTTTCCGCGACACAACATATTTGGTTTAAATGTAGCTCATTTCTTCCATTGCTTTCTTTTCAGTGTTG TTTCTGTTGAGATAGCAAAGCAGCAATAGCTTAGGACCTATGGCCACTCACTGTCCTTTCTCCAGCATGGAGATATTCCA GCTGATTAGATTTCCATTTCTCAATGTAATTGGTTGCATGGTATTCATGTAATAATATAGAGATATTATCTACTCTGTCA ATTGCCATTTCTTGTGAAGGTCTTTTTCAGGGTCAACTATTTGAGAACCAAACATGACCAAGTTTGCACAAGAGTTGAAC AGATATCAATTTTCACACATTGATATATCTATTTTTCTCTTTACTGGGTGTCCCCTTCAATCTTTGGAAAATGCCATATT CACAAGGTTGCAAAGAGATAAGTATGAATCAAAAGGTTGACCTTTCCAGATAAACTCCAAGGGAAACTTCAAAAATTGCA GTCCTGATTCCTAAGGCTAATTTGTGCATCCTACTGTCCCAAGTGTCATAGACATAATGAGCATTGACCATGCCTTTTGT GTTGGTAGCTGGATTTTGAGAATTTTTATTCCTATCTCCATTAGCCCTTCAATTCACCGATCAAATTGATGACATTTTCA CTAAATGGCTTGGCAGATTCATCCAAAACTCTCTCTCTCGAAAGTCATAGAAATGCTTTCTGCTTTGTGATTGTGCTATG GTGTATGGCTAGCACATAATAAACTTTGCTTCTAAGATAAAGATATATCACTTACCACAATCATATCTAAAGCTTGCTTC AGTATCTATG
CDS sequence (LotjaGi3g1v0108000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCTGAATTGGTGGGAGGGGCTTTTCTCTCTGCTTTGGTCCAAACCTTGTTTGAGAGAGTGGCCACTCGTGAGAT GGTTGATTTCATAAGGGGAATAAAACAAGACAATGGTCCTAACCTGCTAGACAAGTTGAAGATAACACTGCGCTCAGTTG ATGCTCTGGTCAACCATGCTGAGGAGAGGCAAACCACAGATTTTCACATAAGGGAATGGCTCAATGATCTCAAGGATGCT ATGTTTGAAGTTGAAGACCTTTTAGACAAGATCAGTGTATCATCTTCAAGGCAGAAAATGGAAGCTGTTTTCTTGAGCAG CACTTTTAGTAAGGTATCTGTCTCTTCACATGCTTCTTCACTTGGTGATTTCATTGAAAGGATGGAGACCAGTTTAGAAA AAATGGACAATCTTGTGAAACAAAAAGATGTTTTGGGTTTGAGGGAAGGTGCCAATCAGACACCACATAGAAATCTTCAA ACAACTTCTTTAGCAGGAAAATGTTCTGTCTATGGAAGAGATGCTGATAAGGGTAATGTTATTCAACTTTTGGTTTCTGC ATCAGATTATGGTATTGGTAGTGATAAGATATGTGTGCTCCCTATAGTTGGTATGGGAGGAGTTGGGAAAACTACTCTTG CTCAATTTGTGTACAATGATGAAAAAGTGAAGCAGCATTTTGACATCAAAGCATGGGTTTGTGTTAACCAAGAATTTGAT GTCTTCAAACTAACCAAGGCCATTCTAGAGGCAATCCCTTTAACATGTGACACAATGGATCTTAATTTACAACAGATAAA GTTGAAAGAGTTCCTTCATAACAAGAGATTCTTAATTGTTCTAGATGATGTTTGGAACGAAAGCTATACCATGTGGGAGA TATTAAGGCGCCCATTCGAATTTGGTGCTCAAGGAAGTTGTGTCCTTGTAACAACCCGCAATGAAAATGTTGCATCAGCT ATGCTTACTGTTCCAAGTTACCATTTAAAACCACTAGCAGATGATGATTGTTGGTTGCTGTTTTCTGAGCATGCATTTGA AGGAGGAAGGTTTAAAAGAAGTACTGCATTGGAAGATATTGGCAGGGAAATAGTGAAAAAATGCAGGGGACTTCCATTAG CAGCAAAAGCTCTTGGGGGTCTCTTGCGGTCCAAAGTAGATTCAAGAGAATGGGTGAAGGTTCTGGAAAGCAAGATATGG GACTTTCCAAGTGATAGGAGCAATATTCTTCCAGCTCTCATGTTGAGTTATTACTATCTTCCCTCAACTCTTAAGCGGTG TTTTGCTTATTGTTCCATATTTCCCAAAAACTACCAATTTCGAAGAAAGGAACTCGTGCGCTTGTGGATGGCAGAAGATC TGCTGCTGCATCCCAAACGGAATGGAAATGCGGAAGAACTCGGTACTGAATACTTCAACAATCTAGCATCCAGGTCATTC TTTCTTAATTCAAGTAGGAGGCGCTTTATCATGCATGATCTCATTGTTGATTTAGCTGAATTTGTCTCAGGAGATTTCTC ATTGAGATTGGAGGGCAAGATGAACACTCTCCCCTCAAAAAGAACTCGCTATTTGTCATATAATTCAAAGCTCCAGCTTG ATGATTTGGAGAAAATTATGGCTACATGTGAAAACCTGCGGACTTTTCTTCCATCGCAGGCTTTGTCATGTCCAAGATGT TTGAACAATGAGGCTGTGAGCAGCTTAATTTCAAAACATAAAAGTTTAAGGATCCTTTCTCTGTCACACTGTGGTAATTT GACAGCTTTACCTGATTTCTTGGGTGACTTGATACATTTACGATATCTAGACCTCAGCGCCACTCCAATCTCCAAGTTAC CTGAGTCCACTTGTTCTCTGCACAAATTGGAGATTTTATTGTTGACAAACTGTTCTCATCTTGCTGAATTACCACTTCAA ATAGGAAGTTTGATCAACTTGAGGTGTTTGGATATCAGGGGAACAATAATAGGTGAAATGCCACCTCATATGGGTACTTT GACAAATCTTCAAACCTTAACTAGATTTGTTCAGGGTAGTGGGCAAGGGTCTGGCATTGAAGAGCTGAAGAATTTTCCTT TTCTTAAGGGAAAGATCTCTATTTCAAATCTCCAAAATGTCACCTATCCACATGATGCTATGAAGGCTAATTTGTTGGGG AATATGGAACTTAATGAATTAATGTTGATTTGGGGTACAAATGCAGATGAATCAAAAAATGTTAGAAGCCTATTGCATTG GTTGGAGCCTCCTATGACCTTGGAAAAACTTACCATCAGAAATTATGGCAGTACATCATTCCCAGCCTGGTTAGGAGATT GTCAATTCTCAAAGTTAGTATCTCTATCCCTTAATGATTGTGCAAATTGTCTTTGTTTGCCAACACTGGGGCAATTGCCT TCCTTGAAAGCCCTCTCATTGGTGGGGTTTATGATCGTCACTCATGTTGATGGTGTGTTTTACAACAATTCTTCTATGGA TGCGAAGAAATCTCAGACCCACAATACCACACCATTTAGGTGCCTTGAGAGTTTGCATTTTGAGAACATGCCTCAGTGGC AAGAATGGCTTCCTTTCGGGGAGGAAGGGAAGGAAGATGAAGATGGTGCATTTCCTTGTCTTAAACGACTCGCTATAAAA AATTGCCCAAAACTGAAGGGCTTGAACTTGATCCAAAAGCTACCTTCCATAGAAAAGATTGTTATTACAAAATGTGAACA GCTTGTGGTTGTAGTTCCCCCAACAATCTGTGAATTGCAATTAGAATGTTGTGAGAAGGTTTCAATTCAGAGTCTACTGC CTCAACTATTGAACCTGAAAATCAGTAGTTATAATGCAGCAGAGTCACTATTTGAGGCAATAGATAACAGAAGTTCTTGC ATTGAAAAGTTGAGTATCTCAAGTTGTCCTCTCATTCAACACCTTCCTAGTAATGGCATTGCAAACACATTAAAATCACT TACCATTATAAACTGTGAGAACATTGAGTTTCCTATGAGCCAATGCTTTCCATATCTTGAGTTCTTATGCATCAAATGGA GTTGTGATTCCCTGAGGTCTTTCATAATGGACTTGTTCCCAAACATGATCCACCTTGAAATACAAGGATGCCAGAATTTG GAGTCTCTTGTAGTCACCGGGGTGCAGTTGCAATATCTTCAATCTCTGAATTCCTTAAGGATCTGCAATTGTCCTAACTT TGAATCTTTTCCTGAAGGTGGACTCAGAGCTCCAAATATGACAAATTTACATTTGGAAAAATGTAAAAAATTGAAGTCTT TTCCGCAGCAGATGAACAAGATGCTCCTGTCCCTCATGACTTTGAACATAAAAGAGTGTCCAGAACTTGAGTCAATTCCA GAGGGAGGTTTTCCAGATAGTCTGAACTTACTTGAGATCTTTCACTGTGCTAAACTATTTACCAACAGGAAGAACTGGGA TTTGCAAAGACTGCGCTTTCTTAGAAGCTTCGCTATAGCGGGTGCATGCGAAGATGGAGAATCCTTCCCAGAAAGATGGC TGCTTCCATCCACTCTTACATCCTTTCATATCCTTGCTCTTTGGAACTTGAAGTATCTAGATGAGGACAGCCTTCAAAAA TTGACCTCTCTAGAGACTTTGGGGATTGCATGCTGCCCAAAACTTCAGTGTATGCCTGCAAAGCTTCCTTGTTCGATTTC TACCCTTCATATCGTGAGAAGTCCAAGACTTGAAGAAAGATGTAGAGGAAGGAAATCTGAAGATTGGCCCAAAATTGCTC ACATTCCCATGATACGGATCAACAGGAAATTGCTCCAATAA
Protein sequence (LotjaGi3g1v0108000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAELVGGAFLSALVQTLFERVATREMVDFIRGIKQDNGPNLLDKLKITLRSVDALVNHAEERQTTDFHIREWLNDLKDA MFEVEDLLDKISVSSSRQKMEAVFLSSTFSKVSVSSHASSLGDFIERMETSLEKMDNLVKQKDVLGLREGANQTPHRNLQ TTSLAGKCSVYGRDADKGNVIQLLVSASDYGIGSDKICVLPIVGMGGVGKTTLAQFVYNDEKVKQHFDIKAWVCVNQEFD VFKLTKAILEAIPLTCDTMDLNLQQIKLKEFLHNKRFLIVLDDVWNESYTMWEILRRPFEFGAQGSCVLVTTRNENVASA MLTVPSYHLKPLADDDCWLLFSEHAFEGGRFKRSTALEDIGREIVKKCRGLPLAAKALGGLLRSKVDSREWVKVLESKIW DFPSDRSNILPALMLSYYYLPSTLKRCFAYCSIFPKNYQFRRKELVRLWMAEDLLLHPKRNGNAEELGTEYFNNLASRSF FLNSSRRRFIMHDLIVDLAEFVSGDFSLRLEGKMNTLPSKRTRYLSYNSKLQLDDLEKIMATCENLRTFLPSQALSCPRC LNNEAVSSLISKHKSLRILSLSHCGNLTALPDFLGDLIHLRYLDLSATPISKLPESTCSLHKLEILLLTNCSHLAELPLQ IGSLINLRCLDIRGTIIGEMPPHMGTLTNLQTLTRFVQGSGQGSGIEELKNFPFLKGKISISNLQNVTYPHDAMKANLLG NMELNELMLIWGTNADESKNVRSLLHWLEPPMTLEKLTIRNYGSTSFPAWLGDCQFSKLVSLSLNDCANCLCLPTLGQLP SLKALSLVGFMIVTHVDGVFYNNSSMDAKKSQTHNTTPFRCLESLHFENMPQWQEWLPFGEEGKEDEDGAFPCLKRLAIK NCPKLKGLNLIQKLPSIEKIVITKCEQLVVVVPPTICELQLECCEKVSIQSLLPQLLNLKISSYNAAESLFEAIDNRSSC IEKLSISSCPLIQHLPSNGIANTLKSLTIINCENIEFPMSQCFPYLEFLCIKWSCDSLRSFIMDLFPNMIHLEIQGCQNL ESLVVTGVQLQYLQSLNSLRICNCPNFESFPEGGLRAPNMTNLHLEKCKKLKSFPQQMNKMLLSLMTLNIKECPELESIP EGGFPDSLNLLEIFHCAKLFTNRKNWDLQRLRFLRSFAIAGACEDGESFPERWLLPSTLTSFHILALWNLKYLDEDSLQK LTSLETLGIACCPKLQCMPAKLPCSISTLHIVRSPRLEERCRGRKSEDWPKIAHIPMIRINRKLLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| Pfam | 10 | 106 | 97 | 2.6E-18 | ||
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 1266 | 1247 | - | – | |
| PANTHER | 42 | 808 | 767 | 1.0E-190 | – | |
| PANTHER | 42 | 808 | 767 | 1.0E-190 | – | |
| Coils | 43 | 63 | 21 | - | – | |
| Coils | 70 | 90 | 21 | - | – | |
| Gene3D | 151 | 324 | 174 | 6.9E-40 | – | |
| SUPERFAMILY | 157 | 431 | 275 | 9.25E-71 | ||
| Pfam | 197 | 396 | 200 | 1.3E-50 | ||
| PRINTS | 199 | 214 | 16 | 3.4E-20 | – | |
| PRINTS | 271 | 285 | 15 | 3.4E-20 | – | |
| PRINTS | 368 | 382 | 15 | 3.4E-20 | – | |
| SUPERFAMILY | 491 | 916 | 426 | 3.4E-37 | – | |
| Gene3D | 506 | 912 | 407 | 3.5E-38 | ||
| PRINTS | 571 | 587 | 17 | 3.4E-20 | – | |
| Gene3D | 913 | 1046 | 134 | 1.4E-6 | ||
| SUPERFAMILY | 918 | 1253 | 336 | 1.05E-19 | – | |
| Gene3D | 1047 | 1260 | 214 | 5.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0108000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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