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LotjaGi3g1v0108400.1

Overview

Field Value
Gene ID LotjaGi3g1v0108400
Transcript ID LotjaGi3g1v0108400.1
Lotus japonicus genome version Gifu v1.2
Description Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IYQ5|G7IYQ5_MEDTR LRR and NB-ARC domain disease resistance protein; Found in the gene: LotjaGi3g1v0108400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:13345861..13350834) extracted from Lotus japonicus Gifu genome v1.2.

ACCAAAGAATAAAAGATACTAAATAGTGTAAAAACCAGAAAGAAACAGATTTCATTTCCACACTGCCTTTCTTTGTTAAT CTATTCTTCAATCTAGCATCATATTGAATCCAAGAAACACATGGCTGCAGCTTTTGTGGGAGAAGCATTCCTCTCAGCTT CTGTGGAGGTGCTGTTAAACAGGATCTTTTCCCATGAGTTCCTAGGCTTCTTTCATAGCAAGGGACTTGACATTTCACTC CTAAAAAACCTGAAAATAACACTTTTGAGTCTCCGAGCTGTACTAAATGATGCAGAGGAGAAGCAGATCACCAACCCTGC TGTCAAGGAATGGTTGGATGAGCTCACACATGCTGTCTTTGATGCTGATGATTTGCTGGATGAAGTCAACACTGAGGCTT TGCGATGCAAACTTGAAGTCAGCTCTCAAAGTGAAACCATCAGTGATCAGGTGCTGAATTTTCTTTCTTCGCCTTTTAAC CGGTTATCGGAGTTGATCCATTCACAAATACAAGCATTATTTCAAAGATTAGAGCATTTTGCACAGCAAAAAGACATTCT TCATCTGAAAGAAGGTGTTTCCAGCATTGTTTGGCAAGGAACTCCTACAAGTTCTGTGGTAGATGAGTCTGCTATTTATG GTAGAGATGATGACAAATGGATACTTAAAGATTATTTGATGTCAGAAGATGCTAGTGGTAGTGGCAGTAAAATAGGAGTG ATTTCCATTGTGGGCATGGGAGGGATTGGGAAGACAACTCTTGCTAAACTCCTTTACAATGATCATGAAGTTGAAGGGAA TTTTGATCTAAAAGCGTGGGCATACATTTCAAAAGATTTTGATGTTTGCAGGGTTACTAAAACCATTCTTGAAGCTGTTA CTTTTAAACCTGTTGATACAAATAACTTGAATATTCTTCTAGTGGAATTGCAGCAAAGCCTAAGGCATCAAAGATTCTTG CTTGTGTTGGATGACATTTGGGATGGGAGCTACATTGATTGGAACAATCTAATGGATATTTTTAGTGCTGGGGAAATGGG AAGCAAAATCATCATCACAACACGAGATGAAAGTGTTGCGAAAGCCATGCAAACCTCTTTTCCTATCTACCATCTGACGT CTCTAGCCATTGAAGATTGCTGGTCTTTACTCGCCAAACACGCGTTTGGAGCATATCGCTGCAACGAAAGGTCCAACCTC GAAGTGATTGGTCAAGCAATTGCGAAAAAGTGTGGTGGATTACCATTAGCTGCTATAGCACTTGGAGGTCTTCTCCGCAC CAAGTTATCACAAAATTACTGGAACAAGGTATTAAAAAGTAACATTTGGGATTTGCCCAATGTTAAGGTGCTACCAGCTC TACTGTTGAGCTATCATCATCTACCTGCTCCTTTGAAACAGTGTTTTGCTTATTGTTCAATTTTCCCAAAGAACACCAAG TTAGAAAAAAAGATGGTAATTCAGCTATGGATTGCAGAAGGCTTAGTACATCAGTCCAAAGGTGAGGAAACTATGGAAGA AGTGGGTGATGAATACTTTGATGAACTAGTATCAAGGTCATTAATACACCGAGATGGGCAACCATACTTTAAAATGCATG ACCTCATGAATGATTTAGCCACAATGGTTTCATCTTCGTATTGTATCAGGTACGATGATCGAAAGTCACATGAAAGTGTT GAAAGAATTCGTCATTTGTCATACAACAAAGGCAAATATGACTCTTTCAATAAATTTGGTGACATTTATCAATCCAAATA TCTTCGTACATTCATAGCCCTACCATTAAAACTATGGTGGTTGCCAGAAAAATGTTTTGGATTCCATCACTTATCAAACA AAGTAGTACATGACTTGTTACCAGAAATGAGACAATTACGGGTGCTGTCCTTGTCACACTATTATAATATCACTGAGCTC CCTGACTCTCTTGGGAACTTGTTACATCTGCGATATTTGGACCTCTCTAACACTGAAATTCAAAGGTTGCCGAATGTGAT ATGCAAGCTCTACAATCTGCAGACCTTGTTGTTGTCCAAGTGTTGGTTCCTAATTGAGTTGCCTGAGGACATTGGAAATT TGGTTAATCTACAACACCTCGACATCCGGGGTACAAACTTGAAGAAGATGCCCGCACAGATAGCCAGGCTGCAGAATCTT CAGACTTTGTCTGCCTTTGTGGTCAGCAAAGTGCAGGATGGTTTGAAGGTTGGGGAGCTAAGAAACTTTCCCCATCTGAA GGGGGAGCTTTCCATTTCAAAGCTACAAAATGTTACTGACCCCTTAGAAGCTTCCCAAGCCAATTTGAAGAAGAAAGAAC TCATAGAAGTGTTAGCATTAGAATGGGATCATGGTACCACTGAAGACACGCGAATCGTAAGGCTTGTGCTTGATCAGCTG CAGCCTCCCACAAATTTGAAGAAACTAACCATCCAATGCTATGGGGGAACCAGCTTTCCATATTGGTTGGGTGATTCCTC ATTTACTAACATGGTGTACTTGTGCATTAGAGACTGTGATCATTGTTGGTCACTGCCACCCCTTGGACAATTACTCAGTC TCAGAGCACTATACATTTCTGGGATGAAATCAGTTAAGACTGTTGGTACTGAATTCTATGGAAGTGGTTCCAGTTCTTTT CAACCATTTCCCTCCTTGGAAGTTCTGAGCCTTAAGGAGATGCCAGAGTGGGAGGAATGGAACTTGATTGGAGGTACAGC TATTGAGTTTCCTAGTCTAAGATGCCTGTCACTGGAAAATTGTCCAAAACTTAAAGGAACCTTGCCCACCAAACTTCCTT CTTTAACTTTTGAGTTATCTGGCTGTCCACTATTATTTCCCATTGCAATGGTCTGTCCCAAACCCATTGAAAACACATCA ACCAACCTTCCTGGCTCAATTGTGCTCAAGTGCACCAATTTCATCCTAGACTTAACAATCTCAAGCATTCCCTCACCAGC ATCTCTTCCAAGAGATGGCCTTCCAACAACATTGCGATCTCTCACTTTACGTGATTGTGAGAATCTGCAATTCCTCCCTC ATGAGTCCTTGCACAATTACACATCACTTGAGAATTTGACAGTACATAATAGCTGTAGTTCAATGACTTCCTTTACCTTG GGTTCTCTCCCTGTACTCAAAAGTCTTAGCATCACAGGTTGTAAGCAACTGCAATCCATTGCCATTGCAGAAAATGCTTC TTCCCACAGTCTCTTGCTTCTTGAGTGGTTGAGCATACATTGTTGTCCTGAACTAGAGTCATTTCCCACGCGTGGATTGC CCACTCCTAACCTATATCATCTGGATGTTTCCATGTGTGACAAGCTTAAATCACTGCCAGAACCAATTGCCAATCTCACC GCGCTTCGAGGATTGACTATTCAGAGTCTTCCAAATCTTGAGTATTTTGCAAAAGAAGGTTTGCCTGTCAATTTACGAGA TTTAGCTGTCTGCAGTCCTAGGAGTTTCTGGACAGAAACTATCAGTGAGTGGGGTTTGCAACGGCTCACTTGTCTTGCAG CGTTGCGTATCGGAGGTGATAATCTTTTGACTGTGCTTATGAACATTCAAGTGCCAGTGTTGCCCACTTCTCTTGTGTCC CTAGTAATCTGTAATCTTCATGATGTAAAATGCTTGGGTGGGATTTGGCTTCAGCATCTCACATCCCTTGAAAAACTTGA GATTTGTTATTCTCCCAAACTCGAATCCTTGCCAGAAGAGGGACTTCCTTCCTCTCTTTCAGTACTGATCATTAGGCAAT GCCCATTGCTAGAAGCAAGTTGCCATAGCAATGGTGGGAAAGAGTGTCCTAAGATTGCTCACATTCCATGCATAATTATC AATAGACAAGTGATCATATGAATCATCCTGCACTTATCTTGTTAGAAGATCTTTGCAGGTTGTCCTTCAAAGATCAATAG ACAAGTGATAATATGAATCATCATATGCTGGGTTTGCCTTCCCCATTCTTTCAACCTTTTATCTTCTTTTTTTTTGTTTT TAAAGATTGTTATGGTTTAGGCTAAAACCTTGAATTGATCACTTGACTTGTTTGAGATGTAATTTAATAGTCTTCTCAGT CTGGCTGTCTGTTTGAGCTACAAAAATCTTGTGCACTGAAAATGAACTTTCTTATCTGATGAAGTAGTTTTTGCTGTCTG CATTCACGCTTTCGTAATTCTGGAAGTGAGACCAGAAATTTAAATGATGGCTATTCATCCTGTGCCTTTTGACATATTGT TCAGATTCATCAATGAAGTGCAGAATGTTATCTTTTGACAGGATTGTCTAGACTCTAGAGAAAGCCTTCAGAATGATGTA TTATTTGGTATCCAATATCTGATTTCTTATTATGTATGCAATTTGTCACTGAATGGTACTTATATTTTACTTGGTTGAAG TGGGAATCATTTGGTAAATTACTGGCTAAACTAGACCATAGAAAGAGTAACTAGGGATTACCGAATTCATTTGTAAAGTT CTGTTTATGAACCTGGTATTTTGAGGATCTGATTGATGTGACACTCTAGTGGGTATGTATTAGCCCAAAACAAAACAAGA AAGATTTGGAAAAAGTTTGGTTGAGACTCCATAATAAGTGGGAAGAAGTGAGAGATGGAAAGAAAAAAGAGAGAAAGTAA AAGATGATAAGTGATATGATGAAGGAGAAGAGAGATTAATAGAAAGTAAGGTAAAAATGAAGTGGGAAATTATAGAAGGG TGAATGAATTATAGCTCTAAGGATTTGTTCACACCAATACATTCACACTTATTAGAGAGAGATAGGAATAGAAGAGAGAA AAATAATATATATGATGTGTGATGTGATAAAAATGGAGTAAGAGATAAGAAGAAAAACTTGGTGAAAATGATATGAAAGA TAATGTTGTAATTGGTATGATCATTTTAAAACCCCTAAGCAAAAACATATACAAGTTTATGAAAGAAAGGAGAAACAGAT AAATTACTTACACG 

CDS sequence (LotjaGi3g1v0108400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGCAGCTTTTGTGGGAGAAGCATTCCTCTCAGCTTCTGTGGAGGTGCTGTTAAACAGGATCTTTTCCCATGAGTT CCTAGGCTTCTTTCATAGCAAGGGACTTGACATTTCACTCCTAAAAAACCTGAAAATAACACTTTTGAGTCTCCGAGCTG TACTAAATGATGCAGAGGAGAAGCAGATCACCAACCCTGCTGTCAAGGAATGGTTGGATGAGCTCACACATGCTGTCTTT GATGCTGATGATTTGCTGGATGAAGTCAACACTGAGGCTTTGCGATGCAAACTTGAAGTCAGCTCTCAAAGTGAAACCAT CAGTGATCAGGTGCTGAATTTTCTTTCTTCGCCTTTTAACCGGTTATCGGAGTTGATCCATTCACAAATACAAGCATTAT TTCAAAGATTAGAGCATTTTGCACAGCAAAAAGACATTCTTCATCTGAAAGAAGGTGTTTCCAGCATTGTTTGGCAAGGA ACTCCTACAAGTTCTGTGGTAGATGAGTCTGCTATTTATGGTAGAGATGATGACAAATGGATACTTAAAGATTATTTGAT GTCAGAAGATGCTAGTGGTAGTGGCAGTAAAATAGGAGTGATTTCCATTGTGGGCATGGGAGGGATTGGGAAGACAACTC TTGCTAAACTCCTTTACAATGATCATGAAGTTGAAGGGAATTTTGATCTAAAAGCGTGGGCATACATTTCAAAAGATTTT GATGTTTGCAGGGTTACTAAAACCATTCTTGAAGCTGTTACTTTTAAACCTGTTGATACAAATAACTTGAATATTCTTCT AGTGGAATTGCAGCAAAGCCTAAGGCATCAAAGATTCTTGCTTGTGTTGGATGACATTTGGGATGGGAGCTACATTGATT GGAACAATCTAATGGATATTTTTAGTGCTGGGGAAATGGGAAGCAAAATCATCATCACAACACGAGATGAAAGTGTTGCG AAAGCCATGCAAACCTCTTTTCCTATCTACCATCTGACGTCTCTAGCCATTGAAGATTGCTGGTCTTTACTCGCCAAACA CGCGTTTGGAGCATATCGCTGCAACGAAAGGTCCAACCTCGAAGTGATTGGTCAAGCAATTGCGAAAAAGTGTGGTGGAT TACCATTAGCTGCTATAGCACTTGGAGGTCTTCTCCGCACCAAGTTATCACAAAATTACTGGAACAAGGTATTAAAAAGT AACATTTGGGATTTGCCCAATGTTAAGGTGCTACCAGCTCTACTGTTGAGCTATCATCATCTACCTGCTCCTTTGAAACA GTGTTTTGCTTATTGTTCAATTTTCCCAAAGAACACCAAGTTAGAAAAAAAGATGGTAATTCAGCTATGGATTGCAGAAG GCTTAGTACATCAGTCCAAAGGTGAGGAAACTATGGAAGAAGTGGGTGATGAATACTTTGATGAACTAGTATCAAGGTCA TTAATACACCGAGATGGGCAACCATACTTTAAAATGCATGACCTCATGAATGATTTAGCCACAATGGTTTCATCTTCGTA TTGTATCAGGTACGATGATCGAAAGTCACATGAAAGTGTTGAAAGAATTCGTCATTTGTCATACAACAAAGGCAAATATG ACTCTTTCAATAAATTTGGTGACATTTATCAATCCAAATATCTTCGTACATTCATAGCCCTACCATTAAAACTATGGTGG TTGCCAGAAAAATGTTTTGGATTCCATCACTTATCAAACAAAGTAGTACATGACTTGTTACCAGAAATGAGACAATTACG GGTGCTGTCCTTGTCACACTATTATAATATCACTGAGCTCCCTGACTCTCTTGGGAACTTGTTACATCTGCGATATTTGG ACCTCTCTAACACTGAAATTCAAAGGTTGCCGAATGTGATATGCAAGCTCTACAATCTGCAGACCTTGTTGTTGTCCAAG TGTTGGTTCCTAATTGAGTTGCCTGAGGACATTGGAAATTTGGTTAATCTACAACACCTCGACATCCGGGGTACAAACTT GAAGAAGATGCCCGCACAGATAGCCAGGCTGCAGAATCTTCAGACTTTGTCTGCCTTTGTGGTCAGCAAAGTGCAGGATG GTTTGAAGGTTGGGGAGCTAAGAAACTTTCCCCATCTGAAGGGGGAGCTTTCCATTTCAAAGCTACAAAATGTTACTGAC CCCTTAGAAGCTTCCCAAGCCAATTTGAAGAAGAAAGAACTCATAGAAGTGTTAGCATTAGAATGGGATCATGGTACCAC TGAAGACACGCGAATCGTAAGGCTTGTGCTTGATCAGCTGCAGCCTCCCACAAATTTGAAGAAACTAACCATCCAATGCT ATGGGGGAACCAGCTTTCCATATTGGTTGGGTGATTCCTCATTTACTAACATGGTGTACTTGTGCATTAGAGACTGTGAT CATTGTTGGTCACTGCCACCCCTTGGACAATTACTCAGTCTCAGAGCACTATACATTTCTGGGATGAAATCAGTTAAGAC TGTTGGTACTGAATTCTATGGAAGTGGTTCCAGTTCTTTTCAACCATTTCCCTCCTTGGAAGTTCTGAGCCTTAAGGAGA TGCCAGAGTGGGAGGAATGGAACTTGATTGGAGGTACAGCTATTGAGTTTCCTAGTCTAAGATGCCTGTCACTGGAAAAT TGTCCAAAACTTAAAGGAACCTTGCCCACCAAACTTCCTTCTTTAACTTTTGAGTTATCTGGCTGTCCACTATTATTTCC CATTGCAATGGTCTGTCCCAAACCCATTGAAAACACATCAACCAACCTTCCTGGCTCAATTGTGCTCAAGTGCACCAATT TCATCCTAGACTTAACAATCTCAAGCATTCCCTCACCAGCATCTCTTCCAAGAGATGGCCTTCCAACAACATTGCGATCT CTCACTTTACGTGATTGTGAGAATCTGCAATTCCTCCCTCATGAGTCCTTGCACAATTACACATCACTTGAGAATTTGAC AGTACATAATAGCTGTAGTTCAATGACTTCCTTTACCTTGGGTTCTCTCCCTGTACTCAAAAGTCTTAGCATCACAGGTT GTAAGCAACTGCAATCCATTGCCATTGCAGAAAATGCTTCTTCCCACAGTCTCTTGCTTCTTGAGTGGTTGAGCATACAT TGTTGTCCTGAACTAGAGTCATTTCCCACGCGTGGATTGCCCACTCCTAACCTATATCATCTGGATGTTTCCATGTGTGA CAAGCTTAAATCACTGCCAGAACCAATTGCCAATCTCACCGCGCTTCGAGGATTGACTATTCAGAGTCTTCCAAATCTTG AGTATTTTGCAAAAGAAGGTTTGCCTGTCAATTTACGAGATTTAGCTGTCTGCAGTCCTAGGAGTTTCTGGACAGAAACT ATCAGTGAGTGGGGTTTGCAACGGCTCACTTGTCTTGCAGCGTTGCGTATCGGAGGTGATAATCTTTTGACTGTGCTTAT GAACATTCAAGTGCCAGTGTTGCCCACTTCTCTTGTGTCCCTAGTAATCTGTAATCTTCATGATGTAAAATGCTTGGGTG GGATTTGGCTTCAGCATCTCACATCCCTTGAAAAACTTGAGATTTGTTATTCTCCCAAACTCGAATCCTTGCCAGAAGAG GGACTTCCTTCCTCTCTTTCAGTACTGATCATTAGGCAATGCCCATTGCTAGAAGCAAGTTGCCATAGCAATGGTGGGAA AGAGTGTCCTAAGATTGCTCACATTCCATGCATAATTATCAATAGACAAGTGATCATATGA 

Protein sequence (LotjaGi3g1v0108400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAAFVGEAFLSASVEVLLNRIFSHEFLGFFHSKGLDISLLKNLKITLLSLRAVLNDAEEKQITNPAVKEWLDELTHAVF DADDLLDEVNTEALRCKLEVSSQSETISDQVLNFLSSPFNRLSELIHSQIQALFQRLEHFAQQKDILHLKEGVSSIVWQG TPTSSVVDESAIYGRDDDKWILKDYLMSEDASGSGSKIGVISIVGMGGIGKTTLAKLLYNDHEVEGNFDLKAWAYISKDF DVCRVTKTILEAVTFKPVDTNNLNILLVELQQSLRHQRFLLVLDDIWDGSYIDWNNLMDIFSAGEMGSKIIITTRDESVA KAMQTSFPIYHLTSLAIEDCWSLLAKHAFGAYRCNERSNLEVIGQAIAKKCGGLPLAAIALGGLLRTKLSQNYWNKVLKS NIWDLPNVKVLPALLLSYHHLPAPLKQCFAYCSIFPKNTKLEKKMVIQLWIAEGLVHQSKGEETMEEVGDEYFDELVSRS LIHRDGQPYFKMHDLMNDLATMVSSSYCIRYDDRKSHESVERIRHLSYNKGKYDSFNKFGDIYQSKYLRTFIALPLKLWW LPEKCFGFHHLSNKVVHDLLPEMRQLRVLSLSHYYNITELPDSLGNLLHLRYLDLSNTEIQRLPNVICKLYNLQTLLLSK CWFLIELPEDIGNLVNLQHLDIRGTNLKKMPAQIARLQNLQTLSAFVVSKVQDGLKVGELRNFPHLKGELSISKLQNVTD PLEASQANLKKKELIEVLALEWDHGTTEDTRIVRLVLDQLQPPTNLKKLTIQCYGGTSFPYWLGDSSFTNMVYLCIRDCD HCWSLPPLGQLLSLRALYISGMKSVKTVGTEFYGSGSSSFQPFPSLEVLSLKEMPEWEEWNLIGGTAIEFPSLRCLSLEN CPKLKGTLPTKLPSLTFELSGCPLLFPIAMVCPKPIENTSTNLPGSIVLKCTNFILDLTISSIPSPASLPRDGLPTTLRS LTLRDCENLQFLPHESLHNYTSLENLTVHNSCSSMTSFTLGSLPVLKSLSITGCKQLQSIAIAENASSHSLLLLEWLSIH CCPELESFPTRGLPTPNLYHLDVSMCDKLKSLPEPIANLTALRGLTIQSLPNLEYFAKEGLPVNLRDLAVCSPRSFWTET ISEWGLQRLTCLAALRIGGDNLLTVLMNIQVPVLPTSLVSLVICNLHDVKCLGGIWLQHLTSLEKLEICYSPKLESLPEE GLPSSLSVLIIRQCPLLEASCHSNGGKECPKIAHIPCIIINRQVII 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam 10 102 93 1.3E-19
PANTHER 39 1105 1067 5.8E-197
PANTHER 39 1105 1067 5.8E-197
Coils 41 61 21 -
Gene3D 157 329 173 5.7E-37
SUPERFAMILY 162 432 271 5.52E-67
Pfam 198 399 202 4.6E-52
PRINTS 200 215 16 2.3E-19
PRINTS 273 287 15 2.3E-19
PRINTS 371 385 15 2.3E-19
SUPERFAMILY 491 906 416 8.5E-45
Gene3D 510 911 402 2.2E-48
ProSiteProfiles 585 608 24 5.479
SMART 607 630 24 3.4
ProSiteProfiles 609 630 22 7.188
SMART 654 677 24 26.0
ProSiteProfiles 656 678 23 5.109
SUPERFAMILY 930 1231 302 1.38E-19
Gene3D 936 1237 302 5.1E-18
PRINTS 1001 1017 17 2.3E-19

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0108400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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