Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0110000 |
| Transcript ID | LotjaGi3g1v0110000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; TrEMBL-Plants: tr|A0A072TT30|A0A072TT30_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi3g1v0110000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13577632..13586397) extracted from Lotus japonicus Gifu genome v1.2.
AGAAACATGTGTGTTTCTTCGGCTTGGACATAGAAGTGTGGTTATTGCCGCCGATAAACCAACCAAACACAACAGGGAAC TGCACATACATGTTGAATAGCAAAAGAATGTTTTCGTCAAGGTTAAGAAGGTACGCAATCTCTGTCTCCATTCCTAAGAT TCATCGAAACCCCACTTTCCTTTCTTGCTTCCCTTCATCCTTAAGGCTATACTCCAAGTCTCATGAAGCTGCTGAGCTCG TTTCCTTGTTCCATCGCATGCTGCATATGCATCCTGCCCCACCCATCTTTGAATTTAACAAGATTTTAACCTCCCTTGTC AAGATTAAGCATTATCCTTATGCACTTTCCTTCTATCAACAAATGGAAATTAAGGGAATTTATCCAAACGTGTTTACTTT GAATATCTTGATCAATTGTTTCTGCAACATGGGTCAAATCCCTTTCGCCTTCTCTGTATTGGGCAAGATTCTCAAGAGGG GTTATCAGCCAGATACTGTAACCTTGACTACACTCATGAAAGGTCTCTGTCTTAGTGGTCAGGTCAAGAAAGCTTTGCAA TTTCATGACCATGTGGTAGCACATGGATTTCAGCTCAACCAAGTTAGTTATGGGACCTTGATCAATGGATTATGTAAAAT TGGAGAAACAAGTGCTGCCTTGCAGTTGCTGAGGAAGATCGAGGGGCTAATGGTTAAGCCTGATGTGGTAATGTACAATT CTATCATTGACTGCTTGTGCAAAGATAAACTTGTAACCGATGCCTATGATCTACATTCTGAAATGGTTGTCAAGGGAATT TTGCCTGATGTGTTCACTTACAGTTCTCTAATCTATGGCTTTTGCATTCTTGGACAATTGAAAGAAGCAGTCGGTTTGTT AAATGAAATGTTTCAGAAAAGCATCAACCCAAATAATTATACTTTTAATATATTCATTGATGCTTTAGGTAAGGAAGGGA AGATTAGAGAAGCTAAAAATGTGTTAGCTATGATGATAAAAGAAGGCGTGGAACCGGATGTGGTTACTTATAACTCTTTA ATGGATGGTTATTGCTTAGTTAATGAAATGAACAAAGCAAAGTATGTATTCAACTCTATGACCCAAATAGGATTGAGCCA TGATGTCTGCAGCTATAGTATCATGATTAATGGTTTATGTAAGACTAAAAAGGTGGAAGAAGCTGTGAATCTCTTTGACG AAATGTATTCAAAAAATATTGTTCCTGATACAGTAACATACAACTCTCTTATTGATGGTTTTTGCAAGTTAGGAAGAATG TCTGATGTTTGGAAGCTTATTGATAGGATGCATGAAAGTGATATACAAGCTAATATAGTCACTTACACTTCCATAGTAGA CGCTTTATGCAAAAACCATCATCTTGACAAGGCACTTGCATTATGTAGAAAAATTCAAGGCCAGGGTATTCAGCTAAACG AGTTCACATACACTATACTTATTGATGGACTATGCAAAGGTGGAAGAGTTAAGGATGCACAAGATATTTTTCAGGAACTT TTAATTAAGGGATACAATCTTGATGTCCAAATGTATAAATGTTATGATCCACGGGCTTTGTATAGAGGGCTTACTTGATG AAGCATTGGCTTTGCGGTCGAAAATGGAAGACAACAGTTGCATTCCGGATGTTGTAACTTATGACATAATTACCCGGGCT CTCTTTGAAAAAGGTGAGAATGATAAAGCAGAAAAACTTCTTCGTGAAATGGTTGCTAGAGGCCTGCTACTAAAATAAAA CAAGGTATGGTGCTTTCTAGTTACATATTATATTTTGAATTTTGACGACAACCATCCATTCATGTTTATGGTTATGCATA AAAAAGATTGTATATGTCATGTGCTTACTCTCACTCTAGATTTGGTTAAAATTCTGTCATTGGGTTCATTTTTATGTTCT AATCATAACAATGGTTGATTATTGCATCTTGACATAACTTTCCTTTTTCTTTGAAGTACAATGACGCAAACCTCCTCTAC TTTAAAATATTTATTCAATCTGTGGTCATTGTTGAAGCCTTCCCTTTCCCGAATACCACATAACTTTTGACTCCTGTTTC ATCCACTGCTTTCTGATTTAATCCTATACCCTTCTGCTCAACTTTGCCGAATATCATATGCCCACAAATTCTAACTGTCA ATGTTCATGGTTTTCGGCTATAGCCTATTTAGTAGGAAGATTAACTAACAAGATAACAGCAACATAACAGTTCTGTAACA GAATCAACTAAATCCTAACACACTAATGTAAAGACTTCATTAGTGTGAACCCGAGCTATATAATATCTCTATATAACAGT TCTAGATAGCCTCCTTTATGTTTTGTCTTTTTACTTAAGTCCGTAATCTAATATGATTTTTACTCTCATGCTAGCTATCG TGGCTGTTACATTCTCCTCTTTTTTCTTATGTGCTGTGAGGACAGTCACTCCAATGCTTCCAATTTGTAGTATTCTTCGT TTCATACACGTGAAGCTCAATTTACTCATTCAGTCCATTTGGGCTCAGCCTATGTTTCTTCCTCCTAGCATAAACTTAGG CTAAGGGCATATCAGCTGTCTTCTGGGAAATTCTCTTTAGATTTCATATTTTATAAGCATACACTCCATTGGGGAAAGCC TCATTTACCGGGCTGTCCTTATTACAATAACTGTCAGTTTCTTATTTTTAAAACTAGAAAAAAGTAGCTTTTTCTTAGTG TGTTTATGGCAATGAAATCCTTGCTCTTGAACTGCCAACTTCTGAAGCTTCTGTTCCACTCTGCCTTTCTCTGCAATTTC TTTAATCAACTGCAATGCAATGCCTAATTGTATGCTTGATATTAGGCATCAGCTTATACACATGGAGCATGCACCTTGTT TTAGTTTTAGTTTCTATTATTTGCGAGGTTTGTTCACCACATATTCTGCAATGCTTGTTTGAGTATGTGTCATGTTAGTG ATTCTTATTATCTGTCATTTGCAATGGCTGATATGATACCTGGGATTGATTTCAATGGGGACCCAATTATAGGAACAGAG TTAAAAAGCGCAGGTGTAGAAAATGGGAGTTGGTTAGTGAGGGGGTGTGATTACCACCATAGGAAGGGATTCGGGTATAA GAGGAGAGAGGGGAGGAGTGAGTCAATCATGCTTTTGGATGAGTAGTTTGTTAGGAGTCTTAGACTCTGGGAATTTCGTT ATTGTAGAGCTTTTAAGCTCACAGGTTACCTCTAATTCAATAATATATTGTTTCTGAAATTCTGGCTTCTACCAATGCCT CTCAAATTGCATCAGCTAAAGCCGCTCAAGATAAACAGGATTGAGGTGTTTGGACCAACATGTTGATAAGTAACCACCCT TTAGTTAGTTGGTTAGGGAATTGTGTGGTTAGTTAGTGAGATGCTTAGATATTAAGGGAGTGAATGAGAGTATTATAAAT AAGAGAGATTGGTGAGAGTAAGGCATCTTTGGATCATTTAGGATTGGGACTTGGGAGAGAGGTGAGTCTCTCGAATACTC ACCAGATTCATGTATCCTTCTCTAATTCCTATTTGGGATTAGGGTTTATCTTGCATAGTAGTACTCTTTCTCTCTACATT CTTGGCGGGTTCTATCAATTGGAACATGAGGCATTCAATGTCTGGTATGCATTTGGTTTTGTTTCTCTCTGTAATCTCAA TACTGCAAAGTCAATGAAAAGGTTTTGGTTCTACATAGCCACCATCACCTTCCCTCTCCCCAAAAAATAATTTCTACTGT CTACCAATGAGATGAGTTGACGGATCCATAATGTGATGTACTAAACTATATATTATATTTCTTCTAACCCTAAGCCTCCA ATATGCGAAGTTTATCCTAAAAAATTTAAACTTTTTTCCCATCACAATGTAAAGGGCACCAAGAGCGGCATTTTATTGCA ATTATAGTGTAGCTGGGTAGCCTCTTTTATGTTTTGTCTTTTTTCTTAAGTCCATAATCTGATGTGATTTTTACTCTTTA TGTGCTTATGCCAAAAGCCTTCAGTCTCCATTCAGATCATGCAAGCTGTCCTTGCTGTTACTTCTCTTTTTGTCTTATGT GCTGTGAAGACAGTCACTCCATCTCCATTCCTTTCATACATGAGAAACTCAATCTGCTCATTCAGTCCATTTGGGCTCAG CTAATGTTTTCTCCTCCTAGAACAAACTTAGCCTAACTCCATATCAACTGCCTTCTGAGAAGTTCATGTTTTACAGGCAT ACACTCCATTGGGGAAAACCTCATTTACCGGGCTGTCTTTATTGCAATAACTGCCAGTTTCTAACTTTTAAAACTAGAAA AAAAATAGCTTACTTTGTGTTTGTAGACGTATAAAAACGTGTGATATTATTTTATTGATTTGTTTATAAGCAGGGGCGGA CCCACGTTCAGTTCAGGGGGTTCAGTTGAACCCCCTGAAAAAAAAAATTCCTACATACCCCCCTATAGTAATTTTTTTTT GAACCCCCTGAAATTGAAAAATTGCACCCAGGTCCCAGACAGCCTCACTCTCTCTCACGCACTCATTCTCACTCTCAGTC TCTCTCTCACCTCACCTCACTCACGATTCACGAACGCACCACCACCAATCCACCACAGCACCACCGGCCGCACAACGCAC CACCACGGCACCACCGACACTGACACCTTCCATCTCTGCTGCTGTTGAAGGTTAGTTAGGTACTTAGGTTTAGGTATTGG AAAACCCCAAAATTTAAAACCCCAAAATTGAAAACCCAAAAATTGAAAACCCCTTGATCTGTAGTTTATTGCCTTGATCT GAAGTTGCTGATACTTAATCTTCAACCTTTGTTTCTGAATTCTGATGGCCCTGTTCGGCTGTTCCTTCCTCTGCTCTGTT TTCCCTTTTGCTGCTTTGTTCCCTTTTATCTTGCTGTTTTGTTTGAAATCAAAGTGGGAATGTGGAATCAGATTTTGAAA TCAGTCAGATAAAGGCCTGGCAATGGCTGGTCCAACCATTATTATGCATTAGAGCATTGTGATAGCAGACCCCAATCATT ACACTGGATGAGTAGGTGGTGTATCTGGCTCCTGTTTATTCGCTTATTGCTGCTGTGGGGTGTGTGGAAGGTTGATTACA CCACTAATTTGGGGTTGTGTGGATTGTTGATTGGTGCCTTGGAATGCTTGTTAGTTGCAAGGGATACTGATCTATGATTT GTGCTGCTTATCACACGCTGGCTATCTCCTAGGAGCTCGTTGGTCTTTATTTATTTTTATCCCTTTTTCCTCCTTGTAAT CTCTCTGGTTTGGGCTTTGTTTTTGCCCTGTTTCTCATTCCTGCTTTTCTGTTCTTCTTGGTTCTTTTCTATTCTATTTA CTTGTAATTTACCATGGGTGGTACCCCTTGTGCCCTTCAATACAAGTATTTGGCTTACCCGAAAAAAACTAGTCTTACTG TTTTATTTTATATCGCTGTCCTACATGTGTTGAAGCATCTCTAATTTGTTCCTTGGTTTCCCCAAATAGGTAGGCAGTGC AGCAGCTTATTTGCTTTGTTCTCTTGGCTTCTTCAGTTCTTGTTATTACCTGGCTCAATTTAAGGTAAGTCTCCAAACTG TTTGAGGGATTGAGTGAGTGAATAGAAAATAGAACTATACAGGTCAATGATTGTTAATACTAAGAAATCTCACTATTTAT AAGTGCAAAGCTTGTGTTCTACTTGATGGATTGAATCGAGGTTTGCCTAAGTTGGGAATTGGACAGAGTCAGGGTGGTAT TGGTGGTGAGGATGGAAATGAAGGTGGAAAGAGCATTGAGAGCAAACAATGTGGGACTCTGGATTTCTAATTTGCCATAT AGGCTTCATATGAACTCTGTATTTTGATTAATTGAACATATCCTTTGAATTGTAGTTGATAAATCCATTAGCTATTTGGT TTATCTCATCTTAATTTGGTTGATAGAGTTCCATGAGTTGACCAGTTGAGGATATTTGTCAAGTAGAGAAACAATATATA TTGATTGGAAACTCTCCTATAGTTTGATGTAGAGAGCTCAGAGGACCGCAAAACTACTACAAGATTAGATACTTTACCTG CTGTTAATCAAATCATCTTCATCACTTAATGTATGTTTTTGTAACTTTGTTCTTAAACATTGGTCACTGTTGACTGCTTA TACAGACTGGCATTTTTGTAAATGCATGTTAGTTGATCTTTAAAATTCTTTATTAGCCAAAGATTTAAATATTTTCCCCA AAAAAAAAATAAGGGATCAGAATTGTCAAGAGTTCAATAAGGGACTGCAAGATGTGGATTGAAACATTTTATTTATATAT GAGATCATCTACAGTTTGTTTAAATCGGGGTAGATTATCTTAATCCTTTTCTAGAGTAATTATGCAAAGCTTTATTATTG TTCATTTGAAAATTTTGAACCCCCTTACCCCGGGGTCCTGGATCCGCCACTGTTTATAAGGACTTTACTTTGTGTTTCGA GGATAATATTAAATATTTTATGTGTCTCCACCCAGCTGCTTAAACTTTCGGGATAGTTGGTTCATGTTATTGTATGAGAG CCTCTATCACCACGTGGTCTGGAGTTCAATCCTTATCGCTCCCTTTATTCTAAGTTGAATTTCAAAACAAGGTAGGTAGG CTTATGTATTTTCCACACTTTAAGCCAATGGATTCTTGCATAAGGGAGTGTTAGAAATATAACAAAACACGATTCATGTC CTAACTGAATTCTGTTGGGCACCAGATCTGACTACTTCCTAACTACTAACTGCAATTATTCTAACTGCTGAAAAAAAGTA AAATAGTATATGAGTAATCTTTGTATTACTTTGTCTACTTACGTGCTTTTGATTTCAATGACTCATCTGAGGAACACACT AACATTAGACTGTAGAATTTTGTTTAATTCTTTTATTAGTATGTTGCTACAATGAATAAATTGGCACTATTTTGTGAAAA TAACAGGCTGGATAATAAGCTCTCTCTTTTTACTTTTTAAGGGGGAGGTGAGATTGGGGGACTTGAAATCCAGAAATTGT ATTTACCAATTTGGCTTGCTGTACTTGATATTTCTCTTCCTACACATCAAGAAAATGTGCAAACTGTGGATTAGAAGATC AATGGTTGACTAATAAAACACACAAACATATATAACAAATAATGAAGTTATTAAAATATGCACCATTGATAAATAGGGAT GCTGAAAACCTGGCGTGTTAATAATGTGATGTAAAATACTTTAGCCAATTGCTCTTTTAGTCTTTTTGTTGTTTTATACT AGTTTAATAGTGTAGTGTTTTACTAATAAAGCCCAAAACTGCTGAGATGATAAAAATAACCTGTAAGTACTACACAAATA CCTGTTTTTGATATTCACTGATACAAGTGGCTGCCATTCAACTTTTGCAGAACTCCTGTATACAAGTGGCATCATCGAAC TCTCTAAGCAACTTGGAAGAAGTTTCTGTGTGGAAAAACTGATCGATGCTCTTTTTCTCATCTCACCCTGATGGAACATT AATGGTAGAATTGACCATCTTACTCTAGAAATATTCTCAATAATGACTCTGAACATCAAAGTAGATTTGTAGTATGTTCC AATGAGAAATGAAAGCTGATTGTCCATGGCAGCAACCTTTGTTGAATTTTCTTGACACAAAGCATTGTGCTTCTTGGATA CCTATATACAGCTAAAGTAAACGAGATAGTTCAATAAAGAAAATTCTCTATCTAAAACCCTTGTTTCTGGATCTCACTTG AATTTTAACCAATGAGTGAAAGAGTATTGAATAGAATATAGAGTGTTCGAAAGAAAGTGTTGCTAGCATGGCATATGACC CAATTTCTTAAATAATTATGTACGGTGTACCTTTAACTTATATTCCCATTATTTATATTTTAAATTGGTTTTCCTCTGCA AATGTAATATACATATGATAAAATGGAAGAACTATCGAATCAACATCATGCCATTTTTTAAAAGTGTCCATGCTATATGT AAGATAAAATGACATTTTCATGGATAGAAGTGTAATGAGTATGCTAATAATAGTTCAATCCCCAATAATTTGTTCTTTTC TGAAGATTCTTCCAGATATGGTTCTAATTCTTCATCTTTCAGCAATTCAGATTGAACTCTCTGGAAGATTCTGATATCAA AGTTTTTATTTCTCCTAACATGAACTCTCTTGATGTTTTGACATGAAAGTCTTCAGCTTTCTGCAATTCAGATTGCAGAG GTAGTCTAAGGAAGTTTTCATGGCACTAGACTCTTCAGGATTTCAATAGAACCAAAAATTAATTGAAGATAAAGCCTTAT ATGCTGTTTGCAATGCTTCCTTTCATGAGAACATGAAATAACATGAGTGGCAGCATCAAGAGAATCATAAAGTGCTTCCA TTTCTACATCATCTTGACGAGTTTAATTTGATTTCTGAAAGAATCATCAAAAATATGCTGTTTGCAAGACAGTGCAACAG ATGCTTTTAGGTGCAGTTATTCTCCATTTACTTTGCTAAGGGATGTTGTGGGACTGAGGACATGAATATTTTTCATCTCA TATGCTGCAGAAGATCTCAACTTGGAAACTTTGTACTCTAGAACCAAAAGGTCTTTTCCTTCTACTTGTAACCATCGCTT GCAACTCTTGTTTCTCATATTAGGGGAACCAATAATTATGGCAACTAACCATATCTTGCAGCTCTTGTTTCTCTTGAATC GACCATTACTTTCTTTCTCTTGAATGACGAACGATTAACAACATCA
CDS sequence (LotjaGi3g1v0110000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAATAGCAAAAGAATGTTTTCGTCAAGGTTAAGAAGGTACGCAATCTCTGTCTCCATTCCTAAGATTCATCGAAA CCCCACTTTCCTTTCTTGCTTCCCTTCATCCTTAAGGCTATACTCCAAGTCTCATGAAGCTGCTGAGCTCGTTTCCTTGT TCCATCGCATGCTGCATATGCATCCTGCCCCACCCATCTTTGAATTTAACAAGATTTTAACCTCCCTTGTCAAGATTAAG CATTATCCTTATGCACTTTCCTTCTATCAACAAATGGAAATTAAGGGAATTTATCCAAACGTGTTTACTTTGAATATCTT GATCAATTGTTTCTGCAACATGGGTCAAATCCCTTTCGCCTTCTCTGTATTGGGCAAGATTCTCAAGAGGGGTTATCAGC CAGATACTGTAACCTTGACTACACTCATGAAAGGTCTCTGTCTTAGTGGTCAGGTCAAGAAAGCTTTGCAATTTCATGAC CATGTGGTAGCACATGGATTTCAGCTCAACCAAGTTAGTTATGGGACCTTGATCAATGGATTATGTAAAATTGGAGAAAC AAGTGCTGCCTTGCAGTTGCTGAGGAAGATCGAGGGGCTAATGGTTAAGCCTGATGTGGTAATGTACAATTCTATCATTG ACTGCTTGTGCAAAGATAAACTTGTAACCGATGCCTATGATCTACATTCTGAAATGGTTGTCAAGGGAATTTTGCCTGAT GTGTTCACTTACAGTTCTCTAATCTATGGCTTTTGCATTCTTGGACAATTGAAAGAAGCAGTCGGTTTGTTAAATGAAAT GTTTCAGAAAAGCATCAACCCAAATAATTATACTTTTAATATATTCATTGATGCTTTAGGTAAGGAAGGGAAGATTAGAG AAGCTAAAAATGTGTTAGCTATGATGATAAAAGAAGGCGTGGAACCGGATGTGGTTACTTATAACTCTTTAATGGATGGT TATTGCTTAGTTAATGAAATGAACAAAGCAAAGTATGTATTCAACTCTATGACCCAAATAGGATTGAGCCATGATGTCTG CAGCTATAGTATCATGATTAATGGTTTATGTAAGACTAAAAAGGTGGAAGAAGCTGTGAATCTCTTTGACGAAATGTATT CAAAAAATATTGTTCCTGATACAGTAACATACAACTCTCTTATTGATGGTTTTTGCAAGTTAGGAAGAATGTCTGATGTT TGGAAGCTTATTGATAGGATGCATGAAAGTGATATACAAGCTAATATAGTCACTTACACTTCCATAGTAGACGCTTTATG CAAAAACCATCATCTTGACAAGGCACTTGCATTATGTAGAAAAATTCAAGGCCAGGGTATTCAGCTAAACGAGTTCACAT ACACTATACTTATTGATGGACTATGCAAAGGTGGAAGAGTTAAGGATGCACAAGATATTTTTCAGGAACTTTTAATTAAG GGATACAATCTTGATGTCCAAATGTATAAATGTTATGATCCACGGGCTTTGTATAGAGGGCTTACTTGA
Protein sequence (LotjaGi3g1v0110000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNSKRMFSSRLRRYAISVSIPKIHRNPTFLSCFPSSLRLYSKSHEAAELVSLFHRMLHMHPAPPIFEFNKILTSLVKIK HYPYALSFYQQMEIKGIYPNVFTLNILINCFCNMGQIPFAFSVLGKILKRGYQPDTVTLTTLMKGLCLSGQVKKALQFHD HVVAHGFQLNQVSYGTLINGLCKIGETSAALQLLRKIEGLMVKPDVVMYNSIIDCLCKDKLVTDAYDLHSEMVVKGILPD VFTYSSLIYGFCILGQLKEAVGLLNEMFQKSINPNNYTFNIFIDALGKEGKIREAKNVLAMMIKEGVEPDVVTYNSLMDG YCLVNEMNKAKYVFNSMTQIGLSHDVCSYSIMINGLCKTKKVEEAVNLFDEMYSKNIVPDTVTYNSLIDGFCKLGRMSDV WKLIDRMHESDIQANIVTYTSIVDALCKNHHLDKALALCRKIQGQGIQLNEFTYTILIDGLCKGGRVKDAQDIFQELLIK GYNLDVQMYKCYDPRALYRGLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 30 | 64 | 35 | 5.448 | ||
| Gene3D | 34 | 197 | 164 | 1.9E-37 | ||
| PANTHER | 35 | 299 | 265 | 1.3E-116 | – | |
| ProSiteProfiles | 65 | 99 | 35 | 8.013 | ||
| Pfam | 99 | 147 | 49 | 7.4E-12 | ||
| ProSiteProfiles | 100 | 134 | 35 | 10.819 | ||
| TIGRFAM | 102 | 136 | 35 | 1.4E-5 | ||
| ProSiteProfiles | 135 | 169 | 35 | 10.172 | ||
| TIGRFAM | 137 | 170 | 34 | 2.5E-4 | ||
| Pfam | 166 | 197 | 32 | 1.1E-7 | ||
| ProSiteProfiles | 170 | 204 | 35 | 10.216 | ||
| TIGRFAM | 172 | 198 | 27 | 1.2E-4 | ||
| SUPERFAMILY | 180 | 436 | 257 | 5.31E-5 | ||
| Gene3D | 198 | 269 | 72 | 1.4E-21 | ||
| Pfam | 204 | 252 | 49 | 1.3E-16 | ||
| ProSiteProfiles | 205 | 239 | 35 | 12.047 | ||
| TIGRFAM | 207 | 241 | 35 | 1.3E-8 | ||
| ProSiteProfiles | 240 | 274 | 35 | 11.882 | ||
| TIGRFAM | 242 | 275 | 34 | 2.9E-6 | ||
| PANTHER | 270 | 479 | 210 | 1.3E-116 | – | |
| Gene3D | 270 | 337 | 68 | 4.6E-21 | ||
| ProSiteProfiles | 275 | 309 | 35 | 12.112 | ||
| TIGRFAM | 277 | 311 | 35 | 6.6E-9 | ||
| Pfam | 279 | 322 | 44 | 6.4E-12 | ||
| ProSiteProfiles | 310 | 344 | 35 | 10.753 | ||
| TIGRFAM | 312 | 337 | 26 | 6.1E-7 | ||
| Gene3D | 338 | 410 | 73 | 2.7E-25 | ||
| ProSiteProfiles | 345 | 379 | 35 | 13.165 | ||
| Pfam | 345 | 393 | 49 | 5.5E-19 | ||
| TIGRFAM | 348 | 381 | 34 | 3.0E-11 | ||
| ProSiteProfiles | 380 | 414 | 35 | 12.891 | ||
| TIGRFAM | 382 | 415 | 34 | 4.0E-10 | ||
| Gene3D | 411 | 479 | 69 | 4.2E-21 | ||
| Pfam | 415 | 463 | 49 | 3.0E-14 | ||
| ProSiteProfiles | 415 | 449 | 35 | 10.523 | ||
| TIGRFAM | 417 | 450 | 34 | 3.2E-6 | ||
| ProSiteProfiles | 450 | 484 | 35 | 11.783 | ||
| TIGRFAM | 452 | 485 | 34 | 1.9E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0110000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…