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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0137700 |
| Transcript ID | LotjaGi3g1v0137700.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A; TrEMBL-Plants: tr|I1KU07|I1KU07_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0137700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17879214..17883575) extracted from Lotus japonicus Gifu genome v1.2.
AAAGTGCCACCTAATTGTTTTCTTTAAGAAATTGAAAGAAAGAGGCAAACGCGCGTTTCAATCAAGAGCGCAATTATTGG TCAAAACGCTTCCATCATCGTCTTGTTCTTTCGTTCCATTCTCTGTCACTGAGCTGAACTATAAATTTCAAGCCATTTCA AACTCTGTTTCTGCAATTCGAATCGCGATTTCAACTGTTTTGATTTTCGAATTCGAAGATGGCGACGTCGAACAAGATCG AACGCGGTCACCAGATGTACCGTGACGGACGATACAGCGAGGCGTTAGGGTTTTACACGGAGGCGATCGCCATGGCCAAG ACCAATCCTCAGAAGATCGCTTTGCATAGCAATCGTGCTGCTTGCTTCCTCAAGCTTCACCATTTCAACAAGGTTCCCTT TCTTCTTGTTCCTAACGAATTTGAATTTTATGATTCTGCTATTTTCTAAATTATAGAAATATTAGGTTATTTGAGTAGTG TGCTTGAGAGGGATGAACTGTTTGATTATTTAAAGTGTGTTGGAAATTGATCAGAATTCTGATTTTGACTGTCTGAATAT GTCTGCTGGGTCATTGGTTAGCTGATGGGTAACTAATAATCAGTTGCCCTAGGTGTGAGGGGGCGTGTTAGAAGTCTCAC ATTGACTAGAGATTTGACATAGATAGCCTTTATAAAGGGTAGAGTAACGCTCAACTCTTGAGCTTGTTTTAGGTTGAGTT AGGCCTCCCAAATTCTAATAGAATTGGCTTGTGAACTTGCTTGCGACTACGGAGATTTACTAAATTGACAGTGCTGTTTC CTTCTCTTGTGAATTCTTGATGGTGTTCTTTAGTTATGCCCTTTTGTTATAAATTGTGTACCACAATGGTTAGGATTTAT TTTTTGGGTTTGAGACCTACGGTTTGAGCGTTAAATTAACTGAAAGAGGGTGAAACATTTGTTACGATTTCAATATTTTG AAATGATGCCTGTTCTTGTCCTGCTCTCTGCACTTGTCTAGTTGCATGCTTTTGATGAATGATTTCCAGTTTAAATACTT ATTTTCTAGGATGCAATCATTTATTGTCACTACCATTTCAGGCAGCAGAAGAGTGCACCTCAGTGCTTGAGCTTGATCAC GAGCACAGTGGAGCTTTGATGCTGCGAGCTCAAACACTGGTGACCTTGAAGGAGTACCATTCAGCACTTTTCGATGTCAA TAGACTCTTGGAATTGAATCCAGACTCAGAGGTCTATCAAAATCTTCACGCCCGCTTGAAGACACAGTTGGTAAGGCGTT ATCCCATATGTTTTCATTGCAGTTGCATAAATTGAGCAAGTTATGGGATTATGTTTGACTGATTATTGTTGTTGTTCTTG TTCCAGATAATAAATAAAAACCATATGTTAGCAATAAAGAGTTGGATTTAATGTGTGTGTGTGTGTGTGTTTGAAGTTAG TGGACAAAGAAGATAGGTTACACAAACCTTTCAAATTTGGCCAAGATTTTTTATTTCATGATTAATTTGCTTTGTGAACT TGTAATAAGAAATATTGTTTCTGTTCTTTTTTCCCCCTTGCTTAAGGAAAGTCACTTGCTCCAATACCAGAGTCAGAAGA GGAGTTTGAAGAACAAGGAGATGAGGAGGCTGAGCTGATGCTAAATAGAGATAATAAGAAGAAAGAGATGTTTGCTGCAA CTTCTAATATTAGGATTGATCAAAAGGATGAGCTTGGAAAAAGTTTTATCGGTTCTGAGTGTGCTCCTCAGGAAATAGAC CAAAATTCTTCATTTAAACAAGAAAGGGACCAAAACTATGAACCTAAAATGACCACAGTGGAAGTTACGGTTCCTAAAGC ACCAAGCAAAGAATCAACTGAGAAGCAGTCCGAAGGATGGCAAACAATTCCAAAACCTAAAGGACATTCTACTCTAGACT ACGCACGGTGGGACAATGTTGAAGATGATTCTAGTGAAGAAGAAGATGATGATGATGATGAAGATGAAGAATCTTTGCCC CAATACCGGTTTCGTGTGAAAACAGTTGGTGTGCGTCCTGTGAAGTGAGGATATTCGTATACTACGGTACCCTTAAATGG CTGGTTTGATACCATAGTGAATGTAAAAAGTGACATCGACAGGCAAGAATTGACTGAATAGAATCACTTGGTTGGTTGAA TCAGAGGGAAGTGCTGTATTTTATCCATTGGTTTGGTTGTCAATGTTCATGAATCATAGGGAACTACTGTATTTTATCCA TTGTTTTGGTTGTCAATGTTCATGAACACTAAATCAACCTGTTTCAAGCTGCTACCGTCCGATATCCAGCCGGTTTGCAT CTTGTGTGAGAAAATCTAAGTGTTCAAGTTTCGTATTGGTCCAGAAATATAGGGAGAGTTTTTATCTGATGTGGCCCATA CAACATGACCAATATCAACATGAACTATATATTGAATGGGAATTTCCTGAAGCTTAGTTACTGCAGAAAAATTGATGATA AGGTTGCAGTTGTGAGAAATCTAGTCATTCAATTGTAACAATGGACCTGTGATTTGTCCTCTCCTCTTTGTATGATTCAG AAAAATTGATGATAAGGTTGCAGTTGTGAGAAATCTAGTCATTCAATTGTAACAATGGACCTGTGATTTGTCCTCTCCTC TTTGTGCCAACGCACCACTCTAATGGTGGAAGTTAGCAGAACAAATTAGGCCTAGTTTGAGCATTAAGCAACAAGATAAA GCTTGGTTCCATTTTACACAGAAATATCTCTTTAATTTCATCTATTTTTTTCTATCACATCATTCATAATATCTCTCATT TCTCTCTATTTTATTTCAATTTCACTTGTGATTTTATACAAGTCCGCATGTGTTTTCACTTGTTCAGTTTGTTTCAAACT TTCAATTAATGCCATCATTCAAACATCTATTTTCTGCTCCTCCTCTTGATTTCATTTCCTCTGATAGGTGAAACCGTGCG AGTGTAGCAGCCGTCTTTCCAATCTGCTTGCTCTAAAACCTGTGTGACAGTAAATGTAGCAATTAATATTGGCTTGAAAT TATTATTGAAGTTCATAAATGCCCTCTTCATTTATAGCAGTAGTTTATGGTGATAACGATCATTTTTCAATTTTATATCT GGGGACTCACCAGAACTTGTGAAGTCTTTAATAGTAGGGTGCCGGATCATGTGAAATGCTGCAGCTGTACCTTGTTACAC ATTTAATAGGAACACTTTGAATCTTCATGTATATATTCCAACTAAGCCATCAATAAAGTCTTCAAACTGTAGGCATATTT CTTTAGGCCTGTTGCTCACTAGCCTACATTTTCGCTCTGCTAGTAATGCACACTGATTTCAAGCCACTTGAGTTTGTATA GTTGCTGCAAATATGACTACTTTCTCGCTTGGGACCCACAAATTGTTCCTCATTGTGATTTTCTTCATGGTCGTTTCTGT TGATTGGAGCCTTAGGGTGATCCCAAATCATGGTAAGTGAGAAATATAATGTTTTACTCTGCATAGCTTCATGCCTATTT CATACAATAGCCAGTGTTTAAAAGCCTGAAGAAATTGATTTTCAAGCTAGTTTAATGGTCAAATTTACTTGAAGAGTTTT GCCGTCCATAGCAGTCTTACCTTGCTTGAACAAGATTATCTTAGCGGAAGATAGTTGTGGTTTAAATAAAATATTATCTC TTGAAAAATTAGTTGTGACAGTGTTACTAGTCAAACAGGTTTTATTTATGAGGATTTTACATGTGCATTTTCCCCTGTTT TTCAGCTAGGTTGACAAGTTTGCAAGAAGAGAAAGCAGCAATTAGAGATCAAAAGGTTTGATAGTTTAATTATTGTAAGT TCACTCATTTGTGTGTTGGTCAAGGATGGGAATAACTAATTGTTGTATGTACCTACTTGTGATTTTGTAGGAGGAAGCAA GACAAGACAATGTGGGAATGGAACTCTACCCAACCGGCTCCACTATACCAGATTGTTCTCATGCATGTGGACCGTGCTCT CCTTGCAAGAGGGTCATGGTGAGTTTCAAGTGCACGATTGCAGAGTCTTGCCCCATGGTTTACAAATGCATCTGTAAAGG AAAATACTACCATGTACCCTCCAATCGATGACCATTAATTTTGTTTTTTATTTTGTTGATCATTGTTGTAATTCTGAAGA TGATAGTGATTTGAGTTAGACAATTTTACCATTTGGAGATGCTTAGATTGATTAGAAACACGGTTCAAAACCATGGAAGA AATTTTCATGACTCTGTTTTTTGTTGCTTGCTTGTGGTTTTTAAAATGACCCTGTCCTAAACCAGATATAAAATGAACTA AAGATGAAAGATCTATTCCTATCGAAAATAAAAACAGCTAGC
CDS sequence (LotjaGi3g1v0137700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGTCGAACAAGATCGAACGCGGTCACCAGATGTACCGTGACGGACGATACAGCGAGGCGTTAGGGTTTTACAC GGAGGCGATCGCCATGGCCAAGACCAATCCTCAGAAGATCGCTTTGCATAGCAATCGTGCTGCTTGCTTCCTCAAGCTTC ACCATTTCAACAAGGCAGCAGAAGAGTGCACCTCAGTGCTTGAGCTTGATCACGAGCACAGTGGAGCTTTGATGCTGCGA GCTCAAACACTGGTGACCTTGAAGGAGTACCATTCAGCACTTTTCGATGTCAATAGACTCTTGGAATTGAATCCAGACTC AGAGGTCTATCAAAATCTTCACGCCCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTG AAGAACAAGGAGATGAGGAGGCTGAGCTGATGCTAAATAGAGATAATAAGAAGAAAGAGATGTTTGCTGCAACTTCTAAT ATTAGGATTGATCAAAAGGATGAGCTTGGAAAAAGTTTTATCGGTTCTGAGTGTGCTCCTCAGGAAATAGACCAAAATTC TTCATTTAAACAAGAAAGGGACCAAAACTATGAACCTAAAATGACCACAGTGGAAGTTACGGTTCCTAAAGCACCAAGCA AAGAATCAACTGAGAAGCAGTCCGAAGGATGGCAAACAATTCCAAAACCTAAAGGACATTCTACTCTAGACTACGCACGG TGGGACAATGTTGAAGATGATTCTAGTGAAGAAGAAGATGATGATGATGATGAAGATGAAGAATCTTTGCCCCAATACCG GTTTCGTGTGAAAACAGTTGGTGTGCGTCCTGTGAAGTGA
Protein sequence (LotjaGi3g1v0137700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSNKIERGHQMYRDGRYSEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHHFNKAAEECTSVLELDHEHSGALMLR AQTLVTLKEYHSALFDVNRLLELNPDSEVYQNLHARLKTQLSLAPIPESEEEFEEQGDEEAELMLNRDNKKKEMFAATSN IRIDQKDELGKSFIGSECAPQEIDQNSSFKQERDQNYEPKMTTVEVTVPKAPSKESTEKQSEGWQTIPKPKGHSTLDYAR WDNVEDDSSEEEDDDDDEDEESLPQYRFRVKTVGVRPVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 279 | 278 | 1.2E-125 | – | |
| PANTHER | 2 | 279 | 278 | 1.2E-125 | – | |
| Gene3D | 2 | 151 | 150 | 7.0E-29 | ||
| SMART | 3 | 36 | 34 | 100.0 | ||
| ProSiteProfiles | 3 | 107 | 105 | 16.772 | ||
| SUPERFAMILY | 8 | 120 | 113 | 3.8E-24 | ||
| SMART | 40 | 73 | 34 | 0.14 | ||
| SMART | 74 | 107 | 34 | 8.8 | ||
| MobiDBLite | 176 | 279 | 104 | - | – | |
| MobiDBLite | 209 | 228 | 20 | - | – | |
| MobiDBLite | 244 | 261 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0137700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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