Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0148500.1

Overview

Field Value
Gene ID LotjaGi3g1v0148500
Transcript ID LotjaGi3g1v0148500.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Electron transfer flavoprotein subunit alpha, mitochondrial; TAIR: AT1G50940.1 electron transfer flavoprotein alpha; Swiss-Prot: sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial; TrEMBL-Plants: tr|I3SFR5|I3SFR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0148500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:19968130..19974648) extracted from Lotus japonicus Gifu genome v1.2.

GCCCTTTTCATTCTTTAACTATAGGAACTCTTTGCCACCTTAAGCAACTCAACTATCAACCCTATATTGAATTTTTTTGG ATAATAAGGAGATAGACAACACACGCCCACGCCCACGCCCACATGCATCTACCAGCAGTGAGAGTAAAACATTAAACATA AGAACACGTCATCGTCACTATCATCCTTGTCATTATCATCATCATCATCATCATCATCATCATCTTCTTCTAATCCTCAG TCTTTCCTAAAGCTGAATCAGCAAATTTGCAACTGTTGACTCCGATACGGCACCGTTTCAATTCAACATCAAGATCAACC CATCGTCTTCAGTTCCGAAGAAACAAACAATGGCGTCTCGCACGATCCTCGAAGCAATGAAGAACAAACGCTCCTTCTTG TTCCCCTCATCTCCTCGCTTCTCCATTTTCTCTACTCGACTCGTAACAAATCACACTCTCTCTCTCGCTCCCATTTTCGA TTTTCTTTCTGCGATTTATTATTCACTGTGCCATTGTTGTTGAATTCGATTTAGGGTAGCACGCTGGTTGTGGCGGAGCA CGACGGTGGTGCTATCAGAGCTCCTTCTCTCTCTGCGCTCACGGCCACTACGTGTCTTCCTGATAGCGGCTCCTCCGTTT CTCTCCTCTTGGCTGGCTCTGGTCCTTCTCTCCATCAAGCTGCTTCACATGCTGCTTCCTGCCACCCTTCAATTTCTCAG GTTACTCAGATGCTCTGTCAAATTGGTTTTTATTTGGGTGGATATGTTACTTGGGAAGTTTTTTGAAGACATGCAACAGA ATTTGGAATCTTCGGGGGAGGGTTGGTGAGCTAAGGGAAATAAAGAGATTTGCAGGGTGAAGGGTCAGGGTCCAAATCCC GACAAAGGAACTAATTTATTAGCAATTAACGACTAACATTTGTCTATAAAAAAAATTGGAATCTTCATTTGAGTTTATGC AAATAGCTTATGATGATCATTTCTTTGAGCCTATTTTGAACTTATTAGCTTAGGAATAGTGATTTGCCCTTATTGGCGTA AACATTAAGTTGTTTATCCAAATGCGTCCTTATTAAAAAAGAATATTTGAGAAACTAAATGAAATAAGACTAAAAGTGCT TATAAGTGGGTATGGGCATTTTTTTTTCATAAGCTAATATGAACTGGTTATGAAAATAAGCTCAAAACAACGTGTAGATC ATAAACTGTTTTCATAAGCTTACCGAAACATCCGGGTTAGTGCTTATACTATAAGATAAGCTCAAATAAACTCTTTGAAA CACTGTCTAAGTGCTTATTGATATAAGCGCATAATTAAGCTGATTAGTGATTGTTGTCTTCTATGGGATATTGCTGATAA TGTGTTATTGATGAGTGGAAGTTTGTGTCTTAGTGCATTGAGCATTTAATTTTGAACTTGAAATGATAGGGAGGGAGAAT AAAATGGAAACGTTGTGATTGAGAAAGGGTGCAGTTTGTTGTGTGCACAGATACCTGTTGGGAAGGAAGATTGAACTTGG GGATTTTGATAGTTGGTGTGGGTGTGCTGCTTGTGGTGTAGGTGCTGGTGGCAGATTCGGATACGTTCAAGAGCCCTTTG GCAGAACCCTGGGCTAAACTGGTCCATATGGTTCAGCAGAGAGGTGGTTACTCTCATATAATTGCTGCTTCAAGTTCTTT TGGGAAAAATGTCATGCCTCGCGCAGCTGCCCTCTTAGATGTTTCTCCAGTTACTGATGTTACTGGGATTTCTGATTCTC ATACTTTTGTAAGGTATATTAAATATCTTAAGGTGCACTTTGTTGTGCTCTATTTTTATTTTAATAAATAGAAACCGGCT GTTGCACACTTCGATGCTGGTAGCCTGCTATTTAGATCTGTCATGAATTGTTGCTCCTGAACCAATGTACTTTTTTGGAT ATGGAAATATCATTTTACTGTGTAACTGTAAATTCCATGCTGTGTTGTTGTCTATTTGACATTACCCTCTTTGGGTATTG TTATCATGAGTTGTTGACTGTGTTGTGTCTATGCTATTAATAAAGGAGACAAACTCGCATTGCAAATTCAGATCTATACT ATTGTTTCATGTTAGATCTTAATGCTTTTGGACTGTGTCCCGTAGAATCTTTTTTATCATTTAGCATTCTAGCTAATCCA TATAATCAAGCTTCTGACTTCTTTTTCATTTTTAAGGTTTTGAGTGCCTTAATCCTAATATTGCCTAAGATGTGTCATTT TCTTAATTTTGTTGCTCTCTTATATTATGAATCCCTGTAAAAAGATTATTTTCATATCTGAAAAATTAAAATAAGAACTC TTTTTCTTCTTCCCTTGGCTATAGACTAAAGCATGATCTCCTCACCCATTGTTTTAGTATGACAAGCTTTTCTTCAGCTC AATCGCCAATGATGTTAATATTTGTATCTTTCTTTCGTGCTTTTTGACGGGTCTATAAGAGCTTTTATAAGAGTTATTTT TAAACAAAGCAGTGACTACTTGGAGATCTAGCAGTAATCTGGAGTGCAGAGTAGATAAATTAAAATCCTGTGAACCTGGA TTATCTAGGGTTTATTATTCAAATTCTGGGAAGCTATTGCTATCAGAATGTATTTCCCATAGCTAGCTTCTGGCTCCAGA TATAAGACATCCAAACAAATATACTCATCATAGGCATGACTCTTTGGAGAGGACTGAAGTGATACAATGTGAATAGGTCC ATGTATATAGGAGAAGATTTTTGCAATTCCATACTTAATTCTTTCTAGAGAAGGAGTAGAAAAAAAAGAAACTATAGTAT ACATTGGTTAGATGAAAAAGGACATGATACTGACTTAAGCTTTTGCGAGTTTTCGTGTAACTTCTTTATTTGTTCTGCTG CTAAAGTTGACCTTCATAGCTAATGGCATAGTTTTTAAATGATAGAGTTTGCATGTGGTAGGGCATCTTATAGAGTTGGA GAGATAGCTAACACAGTAGGGATGTCTTTTCGATTTTGGGATTTTAGCAGCTAATGGAGGCAGTGCCGTGTGCTTCTTGT ATTTGAGTTGCTCATTATGAACCTGCCTTCATCTTAGTATGAAATTTAAATGTTGGCTTCTTCATTTGACTGAAAGTAAG ATTGTAATTCATACAGGCCTATATATGCTGGAAATGCGCTTTGTACTGTGCGATATACTGGTGCCGGTCCTTGTATATTA ACTATAAGAGCTACATCTTTTCCTGCTCCCCAGAAGTCAGTTGACTCAAAATCTAATGAGGCTTCAATATCTCAGGTTGA CCTTTCAACCTTCGATGAAGGTTTGTTTTTCTGTTTCTAGTGCATGGACATTTTGTTTATGGGAAAATTTAAACAGTCAA GAAGTACGAAATGCATCTTATTTGTCCGTTGACTATAGATCCTGATAGAGTGCTTTGAAGAGCAATGCATCAATAGTATG AGGGATAATTATCCTCAGCCATTTACGTTCATTTTGATCAATTGCCAGCCTGTCAGACTTGAATATTTGGAACTTTCCCT TATAGCAAAATGAACTTATTTTATTATTCTTATTATTGTTGTTTGCTAGATTTGGGCAAGTCTCGATATATATCTCAAAC TACTCAGGAGGACGAACGGCCAGATCTTGGGAATGCAAGAATTGTAGTTTCTGGTGGTCGAGCGCTAAAGAATGCTGAGA ACTTTAAATTGATAGAAAATCTTGCCGAGAAACTGGGTGCTGCTGGTATTATTTTCTATATCTGTGTTACAATGAGTCAT TTTCGTTGCCCAGGATTTGTTATTTTTTGTTTTGTTGGATTCACTATATTGCATTCTGATTTATATTCGTAAGCCATTGA CTGCATATTATTAGTTTGCCCTTTTATTTTTTGTTTTGTGAATTATTTAAAATCTGCTAACTTTTTCCTTCTTTGCTTTA GTTGGTGCCACTCGTGCTGCTGTAGATGCAGGATTTGTTCCTAATGAACTCCAGGTGACAACTTTTCTTCCTTTCAAATA AATATTAACCACCCCCTGAAATCCCACCCACAGAGATATAAAACTAAAACTGAAAGGGAAAAGATGAAAGAAATCTCATT CTGGGTTAACTCATTTTATATCCTAGGCTAATTCCACACTCATTCCTCCCTTGCTTATGCTGCTCATTTTCATGTTGCTT TGTGTAAATAGGCTGAAGTGTAGACTGAGATATTGTTAGGAACCTAACAGACACGCATTGCACACCAAACAGAACACTAG CATCTAAACACTGACACGGAGGCAATGTGTATGGATGTGTTTGAGTTGCTTAAAAATGGAGGACTGAATAGTAATTTTTT TTTGTTCCATGTTTGATTTTAAGAAAAGGTAAGAGGAGTTAGTCTTGACTATCCATATATTGGGTTAAATGATCAAGATA GAATACTCTCATCTCTCACATGTACGTTGGGGGGTGGGGTGTACAAGAATGAACAGGAGGGAGAACACCCCAAATGAAAT GCGCTTTAGACCTTTGTTGACATTTAGGGTTTAATTATTATTTTTTATAGTTTATGAAGAGAGAGGGGGGGTGGTGGTAC AAGAATGAACAGGAGGAGAACACCCCAAATGAGTGTGCTTTAGACCTTTGTTGACATTTACGGTTTATTTTTTATTTTAT TTTATGATTTTCTAAAAGTTCTTTAATGACTTAAAGGAAGTTCTTTATAACTTATACTTCAAGTGTCAACTCATAGATGA GAATCAGCTAAGTCTCCAAGCCAATGTGGACTGTGTCCAAACCGATGAAAAGTAATATTTTTTATCAAGCACCTGGTGAG GAGTGTTTTATGGGGGTTAGTTTCAGAAGCTTGTTGGGCGCTCTAAGAACTCAAGGAAGTGTATGTACTTCTTAATAAAT GGGAAATACTGTGAAAGTTAAGATAAGTAGAAAGCTCTAAGCCTCTAAACTAAAATTGCAAAACATATATGACTTGGACA TGACTAAATATTATTAAACATGAAAGCTGAACATATACTTTTTGTCAAGTAGTCATACATATTTAATCTTTCATGTTATC TTTCAATCTTTTAGCAACTTTTTATTGTTGAGAGATATCTATCCACATCATCTACATTCTACAGATATCACCAAACCAGA GCTTATAAAGGCTTGAACAATCCTCACCTCATGAGCTAGTTTTTTGGATAGAGTTAGATGGCCTAGTCCAAATTCTCAAG GTATCAAAGTCTATTTTAGATCTGAAACTGGGCCACCCGTCACTGTCTTAAAATCTATTTGGCCCGTGACTTCCGAGTCA TGTTATCCCACCATTCTCCACGCGTCCAATCCTGGACGTGAGGGTTGTTTATGAGATCCCACATCGACTGAAAATATGAT CAAAATAGAGCTTTCAAAGGGGCAACCCTCATAACCTCATTAGCTAGTTTTTGGGATAGAGTTCGGCCTAACTGAAATGT AAGAAGAGGAAAGGGCAGCCCATGTAATCCAAGGAAGGACGGGATCAAGCGTTTGGGTTAGCATTACTTGTATTTGCTAA AAGTTGATTCCTCGGCTTGAGCATGTGGCCTTTGGGTTACATAGTGATAACTAACATTGCATCAAGGCTCCCTTTTTCGA GGAAAAATGTTTTAACGTGCTACCTAAGCTAATGCATAAATCAGTAGAATCAATGAATCATAATAATTTTCTGCTTCCTT ACTTGCTACTTAATGCTCAGGCAATGTTAAATCATTGGAGGGATTTGGATAACTATGTGAATAGGCTTTGTCTTGAATCT CATCCACTTCAACTTCATATATCAATTCATGGCCTAATATTTGATATGTAGGTTGGGCAAACTGGAAAGATTGTTGCTCC CGAACTCTACATGGCTTTTGGTGTATCCGGAGCTATTCAACACATCGCAGGAATGAGGGATTCCAAGGTCATTGTTGCTG TGAACAATGATGCCGATGCTCCTATATTTCAGGTAATCGCTCTTGTTCAAACTGATAAAGCGGGGCATATTTTAGTTCAG CTTCTACTTTATTTGCCCCCAAAAAATCCCTAGAAAATTACTTTGCCATTTATGTGATGCTGGATTGGCTTATCAAAAAA TAATGATGCTGGATTGCAGGTTGCTGATTATGGACTTGTAGGGGATCTATTTGAGGTGATACCAGAGTTGCTGGAGAAGC TTCCCGAGAAAAAATAAAAACAATGTAATCTGTAGAACTAAATAGTTGGCCATTGTATGATTGTATCATCATCATTGTAG TCTAAAATATAAATAGCAGTTTATCTAAAATAAAAAGAAAATGAAGTTTTTAAATGGATCATCACTATATACCGGATGGC TCATTTTGCACTATTACAGTGGATAAAAATATTAAAGGCTCGTTTGTTAAATATTTTGAAAGAAATAAGGTTATGTATAA ACTGTTGTTAACCACTTGTTTCAGTGAGAATTCAAATCACATCCGCTCAATAAAAAACACATTTAAGTAAATTTAAGAAC TGGAATTTAAAACTCAAAAGGCTACAAAAGAGTATATAC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0148500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGTCTCGCACGATCCTCGAAGCAATGAAGAACAAACGCTCCTTCTTGTTCCCCTCATCTCCTCGCTTCTCCATTTT CTCTACTCGACTCGGTAGCACGCTGGTTGTGGCGGAGCACGACGGTGGTGCTATCAGAGCTCCTTCTCTCTCTGCGCTCA CGGCCACTACGTGTCTTCCTGATAGCGGCTCCTCCGTTTCTCTCCTCTTGGCTGGCTCTGGTCCTTCTCTCCATCAAGCT GCTTCACATGCTGCTTCCTGCCACCCTTCAATTTCTCAGGTGCTGGTGGCAGATTCGGATACGTTCAAGAGCCCTTTGGC AGAACCCTGGGCTAAACTGGTCCATATGGTTCAGCAGAGAGGTGGTTACTCTCATATAATTGCTGCTTCAAGTTCTTTTG GGAAAAATGTCATGCCTCGCGCAGCTGCCCTCTTAGATGTTTCTCCAGTTACTGATGTTACTGGGATTTCTGATTCTCAT ACTTTTGTAAGGCCTATATATGCTGGAAATGCGCTTTGTACTGTGCGATATACTGGTGCCGGTCCTTGTATATTAACTAT AAGAGCTACATCTTTTCCTGCTCCCCAGAAGTCAGTTGACTCAAAATCTAATGAGGCTTCAATATCTCAGGTTGACCTTT CAACCTTCGATGAAGATTTGGGCAAGTCTCGATATATATCTCAAACTACTCAGGAGGACGAACGGCCAGATCTTGGGAAT GCAAGAATTGTAGTTTCTGGTGGTCGAGCGCTAAAGAATGCTGAGAACTTTAAATTGATAGAAAATCTTGCCGAGAAACT GGGTGCTGCTGTTGGTGCCACTCGTGCTGCTGTAGATGCAGGATTTGTTCCTAATGAACTCCAGGTTGGGCAAACTGGAA AGATTGTTGCTCCCGAACTCTACATGGCTTTTGGTGTATCCGGAGCTATTCAACACATCGCAGGAATGAGGGATTCCAAG GTCATTGTTGCTGTGAACAATGATGCCGATGCTCCTATATTTCAGGTTGCTGATTATGGACTTGTAGGGGATCTATTTGA GGTGATACCAGAGTTGCTGGAGAAGCTTCCCGAGAAAAAATAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0148500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASRTILEAMKNKRSFLFPSSPRFSIFSTRLGSTLVVAEHDGGAIRAPSLSALTATTCLPDSGSSVSLLLAGSGPSLHQA ASHAASCHPSISQVLVADSDTFKSPLAEPWAKLVHMVQQRGGYSHIIAASSSFGKNVMPRAAALLDVSPVTDVTGISDSH TFVRPIYAGNALCTVRYTGAGPCILTIRATSFPAPQKSVDSKSNEASISQVDLSTFDEDLGKSRYISQTTQEDERPDLGN ARIVVSGGRALKNAENFKLIENLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHIAGMRDSK VIVAVNNDADAPIFQVADYGLVGDLFEVIPELLEKLPEKK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43153
24 357 334 2.7E-150 –
PANTHER
PTHR43153:SF1
24 357 334 2.7E-150 –
PIRSF
PIRSF000089
30 360 331 1.3E-108
IPR001308
CDD
cd01715
33 212 180 2.03365E-53
IPR033947
SUPERFAMILY
SSF52402
33 209 177 1.17E-38 –
Pfam
PF01012
34 211 178 1.0E-33
IPR014730
SMART
SM00893
34 220 187 4.3E-34
IPR014730
Gene3D
G3DSA:3.40.50.620
34 229 196 1.3E-45
IPR014729
Gene3D
G3DSA:3.40.50.1220
231 359 129 3.4E-57 –
SUPERFAMILY
SSF52467
236 356 121 6.54E-48
IPR029035
Pfam
PF00766
237 319 83 1.8E-35
IPR014731
ProSitePatterns
PS00696
300 326 27 -
IPR018206

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009055
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
Subterm of
GO:0050660
Molecular function Flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0148500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…