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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0174400 |
| Transcript ID | LotjaGi3g1v0174400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610; TrEMBL-Plants: tr|I1LTU4|I1LTU4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0174400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24162316..24168989) extracted from Lotus japonicus Gifu genome v1.2.
GGCACGGTGGTTAGAGTCACCGGAGGGACTATTTCCGGAAGTTCCTCCGGGGAGGGACCAAAAACGTCCGGTGACCAAAG TTTAGGGACCATTTACATATTTTTCCCTAAAAAAAATGAAGAAAAACCCAGCTTCAACGGCGTAAACTTCACCTAACCCA TTCGGCTTCTTCCTCTGCTCCAACTGAAGCATCTCACAACAAAAAGAGAATGACTCTGAATCTCTCTTCGAGGGCACTCT CTAAGGCATCAACACACCCAGTTCTCAGAACCTTCAATCCCATTACCCCTTTGAAGGACCATGATCCTCGCATTGCTCAC CACATGTTCGACCAAAGTCCTCTTAGAGATATCAAAGAGTATAATCAAATGCTCTTCTATTACTCTCGCAATGACCAACC CCGAGAAGCCCTCAAGTTATTTGTGTCGCTTTGCCGCTCTGGTATACCCCCTGATGAGTCCACCATGTCCTGCTTTTTGA AAGTTTCTGCTGGTTTGTTTGATGATGGGTTTGTGGGTAGGCAAGTGCATTGTCAGTGTGTCAAGTATGGACTAGTTCAG CAGCATGTTGGTGTAGGAACCTCTCTTGTGGATATGTATATGAAAACTGGGGCGGTTAGAGATGGAAGGAAAGTTTTTGA TGAAATGGGGGAGAGAAATGTGGTGACTTGGACTTCCTTGCTTGGGGGGTATTCGTGGAACGGGATTAATGATCATGTGT GGGAGTTGTTCTGTGGGATGCAAGCTCACGGTTACTTGCCTAACCCGTATACTGTTTCGACTGTTATTACTGCTTTGGCC AATGAGGGTGTGGTTGCTGCAGGAATGCAGATTCATACCTTTGTTGTAAAGCATGGTTTCGAGGCAGTGACAACCGTGTG CAATTCTTTGATTAATATGTATTCGCGGTGTGGGATGCTAGGAGATGCTAGAGCTTTTTTTGATAGTATGGAGAGCAAGG ATTCGGTTTCTTGGAATAGCATGATTGCAGGACATGTAGCGAACGGACAGGATTGGAAAGCTGTTGAAACATTTAATGAC ATGCTAGTTGCAGCGGTCAACCCTACGTACGCGACATTGGGTACTGTTATTAAGTCATGCACCCGTCTTAAAGAATTGAG GTTAGTGAGACTGCTTCACGGTAGGGCTTTGAAGAGTGGGTTTTTCACACACCCTAATGTCCATACTGCACTCATGGTGG CATTGATCAAGTGCAAGGAAATGGACGGTGCCTTTCGTCTATTCTCCTTGATGCCCGAGGGTCAAAGCGTGGTGTCATGG ACTGCCATGATCAGTGGATACGTGCAGAATGGTGACATTGATCAGGCTATGAACTTGTTTTCCCAAATGAGGAGGGGATA TGTGAAACCAAACCATTTCACATACTCTACGATTCTAACTGTTCAAAATGCTGTTTTCATTTCTGAAATACATGCGGAAG TTATCAAAACTAATTATGAGAAATCATCTTCAGTAGGAACTGCACTTTTAGATGCTTATGTTAAGTTAAGAAATATGAAT GATGCTATTAAGGTTTTTGAGCTAATTGAAGTGAAGGACATAATAGCCTGGTCAGCAATGCTGGTGGGATATGCACAAAC TGGAGAAACCGAAGAAGCTGCGAAATTTTTCTGCCGATTGACGAAGGAGGGGATCGAACCAAATGAATTTACCCTCTCCA GCATCATTAATGCATGTGCTGCTCCTACAGCAGCAGTGGAACAAGGTAGACAATTCCATGCCTGTGCAATTAAAATGAGA TTAAATAATGCTTTATGTGTGAGTAGTGCTCTTGTCACCATGTATGCAAAGAGAGGCAATATTGATAGTGCATATGATGT TTTCAAAAGGCAAGATGAGAGGGACTTGGTTTCTTGGAACTCAATGATCTCTGGGTATGCACAAAATGGCCAGGCTAAGA AAGCATTAGATGTATTTGAGGAGATGCAAAATCTGAACTTGGACATTGATGCTGTAACATTCATCGGTGTTATTACTGCC TGCACTCATGCTGGCCTAGTGGACCAAGGCCAATATTACTTCAATGTCATGATCAATGATCATCAGATTATGCCAACAAT GGAGCTCTACTCTTGCATGATTGATCTATATAGTCGTGCAGGGATGCTGGAAAAAGCCATGGATATCCTAAATGGGATGT CATTTCCCCCAGGTGCAACTGTGTGGCGCACTCTCTTGGCAGCTTCTCGAGTGCACCGCAATATAGAGCTTGGAAAACTT GCTGCTGAAAAACTTATTTCACTTCAGCCACAAGACTCGGCTGCATATGTCCTCTTATCCAATATGTATGCTGCGTCAGG AAATTGGCAAGAGAAAACCAATGTGAGAAAACTAATGGATAAGAGAAAGGTGAAAAAGGAACCTGGGTATAGCTGGATAG AGGTTAAAAATAAGACATACAAATTCTTAGCCGGTGATTTTTCACATCCTTTCTCAGACCATATTTACTCAAAACTTTCA GAGTTAAATAACCGGTTGAAGGATGCAGGTTATCAACCTGATACGAACTATGTTTTTCATGATATTGAAGATGAACAAAA AGAAACTATTCTGTCTCATCATAGTGAAAGGCTGGCCATTGCCTTTGGGTTAATATCTACACATCCTGGAATTCCAATCC ACATTGGGAAGAATCTTCGAGTCTGTGGAGATTGTCATAACTTCATAAAGTTAGTATCACAGGTTGAACAGAGATATATT GTTGTTAGAGATACAAACCGGTTTCACCACTTTAAAGGTGGTGTGTGCTCATGTGGAGACTACTGGTGATGTTTGGGCTA TCATATGTTTGCTGAATTTAAAATTTACTCAGAGGATCAAACAGATCATATACATTTAGATACAGATTACATACAATGTA GATGAATTGTGTGGTGTCATTTTGGTAAGCTACTCTTATTCTTAATACAACACCATGTGACTAGTTGTACATAACCTTAT TTCTTACTATTTTATGTACATTTTTACTCTTTATTCCTCTTAATAAGTATTATTGTTAAAAATTAAGTTAATCATAATTT TTGTAACAGTGAATGCCAAAACTTTTCAAACCTATAAATTTCACATTTGAAGTTAGTGAATTTAAATTTTGATAAACCAT ATATATGAAATTAATAAATACAGTTAGCGGTGTTTTTCGATTCACAATTTGTTTAACGATTTAAAAGGTCCTATATTCGT TATTTACGCATATCTTTATTGTCAGAAGTAATATGAAACCATTCATGTGTCCTTACCCAATAGCTTAAGCTTTTGGAATA ATTGGTTGTTTGACATGGTATCAAAGCCTCTATGACTAAGTGGTCTAGAGTCCGAATCTTATTGCCCCCATTATTCTAAT AAAAAGTTGAATTTCAATACATGGTAGGTGAGTCTGTGCATTATCCACACTTCAAACCCAAGTGGGCTCTTGCGTGAGGG GGCGTGTTAGAAATAATATAAAACCTTTCATGTGTCATTTACCCAACAGCTTAAGGTTTTGGGATTGATTCTTGACATTT ATATATAGAAGTTCAAGTAATTTATTATTCCCCTAAATTTATGTAAGCATTTTGTAAGGAAATTTCACTAATGAAATGCA TGTTTTGATGATTTAATTATCATTTTCATTTGTTTATTGATGGAAGCTATGCCTTTTGTTGAAAACTAATTAGAAATTAG AATATTTACTTTACTAAGAACTAACTATGAATGGGGACCTTACGAATGTTGTGAAGTGAGCAATGTAAGATTTTTTGGCT GGTTATATGTGTAAATTACTTTTTTCTTTCTCTTGGTCAAGCTATATTATCAGTATATTCTAAAGGGAAAGAAGGAATAT CTTATGTTGTGTAGGAAGCTGGAAACGGAGGAAAGTGGTTGGCTGGAAGGCCTTTTTGCTTCGCAATGGAATGGCAAGAT TGAAAAGGGAGTAGATTTTACTTGACTGGAATGAACTTGCTGAAAATATGGCAAGTTTCTTCTCGCTTCAACATTTTTTC TTTAGTATTTCCATTCCTTTTTTATACCAGTGGTTTTAGTGAGGGGAAAAGGCTTGTTTGTTGTTGTATAGTTGACAATA TAGTTCCTGATGCAGGGCAGCCCACGTTGGAAGTTGGAACATGTAGAGTTTGATATGATCACAACTACCTTGCATACACA GTTGATAATTTTGGGGGTGAAAGGCTCTCTTTATATTCACATAATGTCAGAGGTTTTAACTCATCTGCTTGGTTTTCTCC ATTTTTTCCAGTTCTATTCAGTGAGTCACGAAGCTGTAGCTTTTAGTTTTTCAAGTCTGAGTTGGTCCACAGTTTACTCG ACGTCCAGTTTGTCGGCCTTTCCGCCATTACAACCACTTCCATGAGAAGGATATGTACTTTCATTTTATCCATTTTGAAT TTTTACACTTTCTCATCTCTTTGATGTCGATACGTTGTGTGTTTTAGTCTAATTGCAGAGATATAGAAGATTTGCACTGA CATCCGGTGTGGTGCTCAGGAGGCACACGATATCTATGATTCTATCATGAGGATCTCACATGTGGTAGTGGTTGGCGCTG CAAATGAAAGTCCTTGGAGCATGAAGTAGATACCAGAAGAGGGTTGCTGACATTATTTCCAAAATGAATGGTGAGTGTGT TTGTTACATTACTCTGCCTTGATCATGTAAAGTTACCCTTTGATCATGTAAGCCACACATGAGTGTGAAATTGTTGATTG GTCTTGAAGCTTTAGAAGAGAATCTTTTCTTACCAGTTACAAGCCGGATACCCTCTACCCTGTTTGCTTCGCAGTAAAAG GTTAGAGATGATAGTGATCAGAGAAGGAGAGTGCAGAGATCCTTTTTTTTGTCACCGCTTTAGAATTGCGTGGGACGTGT TTTGGCTGGAAGTTAGGAGAACATAGTTAATTATAACCAAATGATTAAAGCATCGATCTTGCACTTATGTGATAGTGTAG AACTGTTTCCGACTGATCACAACATTGAGAGCAAGTATGAGCAACAGCCATTTCTCTTATGCTTTTAAACTGATTAGTGC TCAAATCATCATGACGATTAGATATCTTTAAATAAGTAGGATATCATTTATTTATGGTTACTAGGTAATCTAATCATGTA ATTAGGGAAGTAATCATGTAAATAGGGAAATAAAATATCTCTAGGATATTTTGGATTTATTGTGCCTATTATCAATAATG GTCCCCGTTGTGTAGTTTAGACACGGTTTAAATCTAATATTGTCTCTCGGTTTCTCCTAATTTTACATGGTAAATTATCC AAGTAAAGAAAAAGTATTGTAGACAGCTTTTAGTTTCCAAATCCAAATCTAGGAATGGATGATGAGATTGTTCCTGCTGG AAACCATCTCTTAGATAAGTTTTGAGTCATAACAGTTGTTGGTTGCACAATCTTTTATGCAATTTAGTTTCATGTTGGTT CTAGATTGCTAGTCAGCTAGAGTATTCACAGTTGGACAAATCATGAACCAAGTATGTATTTATTACTTTACCAAATATAT TTAACTGTTTTAAACTTGTTTAAAATACCACTTTTCTCTTTAAACTGTTTTTTAAAGGTCAAAACCAGTTCAGGAAAGAA AACCAAGTTAAAACCAGTTTGGAGCTTAGAAATAGGTCAAAAATCAGTTTTAAACTGTTTTAAAATCAGTTACTACTTTA ACTGCTTTGTTTCATTATTGATAATGTCACTTGTTTTGTCAATGGTTACTGAAAATGAGTCAATCTACTGGTGAACACAA TATGACATTAATTTGTTAGCCCTTTCATGAAAGATGACACCGGGAAATTGAACCATTTTGGTGATTTTATGCATTGTTCC AAGTTTAGTTAGCATGATGAATCTGAGGATATCTTTGATTAAGAATTGTTTAGAACACCCGTAACTGTGGTTAGTATATC TGTGTCGCAGGAATTGTGACCATCAACTCACAGCTGAGGGCTCATATAGTTGATTGAAACTTCTGGAAATGCAAGTGACG ATGATAACTATTAGAACTTAAGTTACATTCAGATCACCACAAAACCTTGACACTTAAGGCAATGGGTGTGTGTCCTTTAA CTTACATACCATTGTACACTTGTCCTTTTTCATCTGTTTCAAATATTTTGGTTTTGGACCTTCCTTATACTTGTGTTCTT TATGACATTCTCAATCTGATATTATTTTGTGGATACAGCAGGAAAATGAGGTTGAAGAGGGTGGTGAGGGTGCCAATATG GGTGATAATGTGATATATTCCATCAGATGGTTATTCTTGGAGGAAGTATGGAAAAAAAACCTATTAAAGGATCCCCTCAT CCAAGGAAAAAACCTATTGGTGTGAATTATCCCAAAGGCAAAAGAAATGTGCACTTATCGGGAAGTTTTCCTAATTGGAT CTATAAAGATATTGTTTTGTTAATCATTCTTTGCAAAGGGTGCTGATTATTTACTCATCTATCCGCTATTTGCTGCTATT TTTCCGCTTTAAGGGCTTGACATAGTGGATTTTTGGCTTTCCACATTAACAACATTGTTGTATGTTATCTGTAAGAGTTC TCAATATAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTATTACTGGACTCTCAGTGGCTGTCATTGTTTTGATTGT GTTACTGGCTAGGTTGCCATCTGTTTCTTTGTAT
CDS sequence (LotjaGi3g1v0174400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCTGAATCTCTCTTCGAGGGCACTCTCTAAGGCATCAACACACCCAGTTCTCAGAACCTTCAATCCCATTACCCC TTTGAAGGACCATGATCCTCGCATTGCTCACCACATGTTCGACCAAAGTCCTCTTAGAGATATCAAAGAGTATAATCAAA TGCTCTTCTATTACTCTCGCAATGACCAACCCCGAGAAGCCCTCAAGTTATTTGTGTCGCTTTGCCGCTCTGGTATACCC CCTGATGAGTCCACCATGTCCTGCTTTTTGAAAGTTTCTGCTGGTTTGTTTGATGATGGGTTTGTGGGTAGGCAAGTGCA TTGTCAGTGTGTCAAGTATGGACTAGTTCAGCAGCATGTTGGTGTAGGAACCTCTCTTGTGGATATGTATATGAAAACTG GGGCGGTTAGAGATGGAAGGAAAGTTTTTGATGAAATGGGGGAGAGAAATGTGGTGACTTGGACTTCCTTGCTTGGGGGG TATTCGTGGAACGGGATTAATGATCATGTGTGGGAGTTGTTCTGTGGGATGCAAGCTCACGGTTACTTGCCTAACCCGTA TACTGTTTCGACTGTTATTACTGCTTTGGCCAATGAGGGTGTGGTTGCTGCAGGAATGCAGATTCATACCTTTGTTGTAA AGCATGGTTTCGAGGCAGTGACAACCGTGTGCAATTCTTTGATTAATATGTATTCGCGGTGTGGGATGCTAGGAGATGCT AGAGCTTTTTTTGATAGTATGGAGAGCAAGGATTCGGTTTCTTGGAATAGCATGATTGCAGGACATGTAGCGAACGGACA GGATTGGAAAGCTGTTGAAACATTTAATGACATGCTAGTTGCAGCGGTCAACCCTACGTACGCGACATTGGGTACTGTTA TTAAGTCATGCACCCGTCTTAAAGAATTGAGGTTAGTGAGACTGCTTCACGGTAGGGCTTTGAAGAGTGGGTTTTTCACA CACCCTAATGTCCATACTGCACTCATGGTGGCATTGATCAAGTGCAAGGAAATGGACGGTGCCTTTCGTCTATTCTCCTT GATGCCCGAGGGTCAAAGCGTGGTGTCATGGACTGCCATGATCAGTGGATACGTGCAGAATGGTGACATTGATCAGGCTA TGAACTTGTTTTCCCAAATGAGGAGGGGATATGTGAAACCAAACCATTTCACATACTCTACGATTCTAACTGTTCAAAAT GCTGTTTTCATTTCTGAAATACATGCGGAAGTTATCAAAACTAATTATGAGAAATCATCTTCAGTAGGAACTGCACTTTT AGATGCTTATGTTAAGTTAAGAAATATGAATGATGCTATTAAGGTTTTTGAGCTAATTGAAGTGAAGGACATAATAGCCT GGTCAGCAATGCTGGTGGGATATGCACAAACTGGAGAAACCGAAGAAGCTGCGAAATTTTTCTGCCGATTGACGAAGGAG GGGATCGAACCAAATGAATTTACCCTCTCCAGCATCATTAATGCATGTGCTGCTCCTACAGCAGCAGTGGAACAAGGTAG ACAATTCCATGCCTGTGCAATTAAAATGAGATTAAATAATGCTTTATGTGTGAGTAGTGCTCTTGTCACCATGTATGCAA AGAGAGGCAATATTGATAGTGCATATGATGTTTTCAAAAGGCAAGATGAGAGGGACTTGGTTTCTTGGAACTCAATGATC TCTGGGTATGCACAAAATGGCCAGGCTAAGAAAGCATTAGATGTATTTGAGGAGATGCAAAATCTGAACTTGGACATTGA TGCTGTAACATTCATCGGTGTTATTACTGCCTGCACTCATGCTGGCCTAGTGGACCAAGGCCAATATTACTTCAATGTCA TGATCAATGATCATCAGATTATGCCAACAATGGAGCTCTACTCTTGCATGATTGATCTATATAGTCGTGCAGGGATGCTG GAAAAAGCCATGGATATCCTAAATGGGATGTCATTTCCCCCAGGTGCAACTGTGTGGCGCACTCTCTTGGCAGCTTCTCG AGTGCACCGCAATATAGAGCTTGGAAAACTTGCTGCTGAAAAACTTATTTCACTTCAGCCACAAGACTCGGCTGCATATG TCCTCTTATCCAATATGTATGCTGCGTCAGGAAATTGGCAAGAGAAAACCAATGTGAGAAAACTAATGGATAAGAGAAAG GTGAAAAAGGAACCTGGGTATAGCTGGATAGAGGTTAAAAATAAGACATACAAATTCTTAGCCGGTGATTTTTCACATCC TTTCTCAGACCATATTTACTCAAAACTTTCAGAGTTAAATAACCGGTTGAAGGATGCAGGTTATCAACCTGATACGAACT ATGTTTTTCATGATATTGAAGATGAACAAAAAGAAACTATTCTGTCTCATCATAGTGAAAGGCTGGCCATTGCCTTTGGG TTAATATCTACACATCCTGGAATTCCAATCCACATTGGGAAGAATCTTCGAGTCTGTGGAGATTGTCATAACTTCATAAA GTTAGTATCACAGGTTGAACAGAGATATATTGTTGTTAGAGATACAAACCGGTTTCACCACTTTAAAGGTGGTGTGTGCT CATGTGGAGACTACTGGTGA
Protein sequence (LotjaGi3g1v0174400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLNLSSRALSKASTHPVLRTFNPITPLKDHDPRIAHHMFDQSPLRDIKEYNQMLFYYSRNDQPREALKLFVSLCRSGIP PDESTMSCFLKVSAGLFDDGFVGRQVHCQCVKYGLVQQHVGVGTSLVDMYMKTGAVRDGRKVFDEMGERNVVTWTSLLGG YSWNGINDHVWELFCGMQAHGYLPNPYTVSTVITALANEGVVAAGMQIHTFVVKHGFEAVTTVCNSLINMYSRCGMLGDA RAFFDSMESKDSVSWNSMIAGHVANGQDWKAVETFNDMLVAAVNPTYATLGTVIKSCTRLKELRLVRLLHGRALKSGFFT HPNVHTALMVALIKCKEMDGAFRLFSLMPEGQSVVSWTAMISGYVQNGDIDQAMNLFSQMRRGYVKPNHFTYSTILTVQN AVFISEIHAEVIKTNYEKSSSVGTALLDAYVKLRNMNDAIKVFELIEVKDIIAWSAMLVGYAQTGETEEAAKFFCRLTKE GIEPNEFTLSSIINACAAPTAAVEQGRQFHACAIKMRLNNALCVSSALVTMYAKRGNIDSAYDVFKRQDERDLVSWNSMI SGYAQNGQAKKALDVFEEMQNLNLDIDAVTFIGVITACTHAGLVDQGQYYFNVMINDHQIMPTMELYSCMIDLYSRAGML EKAMDILNGMSFPPGATVWRTLLAASRVHRNIELGKLAAEKLISLQPQDSAAYVLLSNMYAASGNWQEKTNVRKLMDKRK VKKEPGYSWIEVKNKTYKFLAGDFSHPFSDHIYSKLSELNNRLKDAGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFG LISTHPGIPIHIGKNLRVCGDCHNFIKLVSQVEQRYIVVRDTNRFHHFKGGVCSCGDYW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 208 | 173 | 3.8E-137 | – | |
| ProSiteProfiles | 47 | 81 | 35 | 10.238 | ||
| Gene3D | 47 | 210 | 164 | 8.2E-26 | ||
| Pfam | 51 | 79 | 29 | 0.027 | ||
| TIGRFAM | 51 | 83 | 33 | 1.5E-4 | ||
| ProSiteProfiles | 119 | 149 | 31 | 6.763 | ||
| Pfam | 149 | 198 | 50 | 3.0E-10 | ||
| ProSiteProfiles | 150 | 184 | 35 | 10.249 | ||
| ProSiteProfiles | 185 | 219 | 35 | 7.366 | ||
| PANTHER | 207 | 299 | 93 | 3.8E-137 | – | |
| ProSiteProfiles | 220 | 250 | 31 | 8.627 | ||
| Pfam | 223 | 250 | 28 | 8.7E-5 | ||
| TIGRFAM | 223 | 251 | 29 | 4.0E-5 | ||
| ProSiteProfiles | 251 | 285 | 35 | 9.69 | ||
| Pfam | 253 | 279 | 27 | 3.3E-4 | ||
| Gene3D | 265 | 400 | 136 | 1.4E-24 | ||
| ProSiteProfiles | 286 | 320 | 35 | 5.623 | ||
| PANTHER | 290 | 398 | 109 | 3.8E-137 | – | |
| ProSiteProfiles | 321 | 351 | 31 | 6.401 | ||
| Pfam | 326 | 350 | 25 | 0.91 | ||
| Pfam | 353 | 396 | 44 | 9.2E-14 | ||
| ProSiteProfiles | 353 | 387 | 35 | 12.31 | ||
| TIGRFAM | 355 | 383 | 29 | 4.2E-7 | ||
| Gene3D | 401 | 522 | 122 | 2.6E-18 | ||
| PANTHER | 407 | 518 | 112 | 3.8E-137 | – | |
| ProSiteProfiles | 419 | 449 | 31 | 6.511 | ||
| Pfam | 449 | 497 | 49 | 2.8E-10 | ||
| ProSiteProfiles | 450 | 484 | 35 | 11.641 | ||
| TIGRFAM | 453 | 486 | 34 | 9.0E-6 | ||
| PANTHER | 503 | 719 | 217 | 3.8E-137 | – | |
| ProSiteProfiles | 521 | 551 | 31 | 6.237 | ||
| Gene3D | 526 | 739 | 214 | 1.1E-35 | ||
| Pfam | 526 | 547 | 22 | 0.7 | ||
| SUPERFAMILY | 531 | 707 | 177 | 5.38E-5 | ||
| Pfam | 552 | 598 | 47 | 2.1E-12 | ||
| ProSiteProfiles | 552 | 586 | 35 | 12.386 | ||
| TIGRFAM | 554 | 587 | 34 | 1.3E-8 | ||
| ProSiteProfiles | 587 | 617 | 31 | 6.5 | ||
| ProSiteProfiles | 623 | 653 | 31 | 7.706 | ||
| TIGRFAM | 626 | 650 | 25 | 7.9E-5 | ||
| Pfam | 627 | 650 | 24 | 1.5E-4 | ||
| ProSiteProfiles | 689 | 723 | 35 | 7.3 | ||
| Pfam | 725 | 849 | 125 | 1.4E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0174400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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