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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0190800 |
| Transcript ID | LotjaGi3g1v0190800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT3G47110.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110; TrEMBL-Plants: tr|G7K5D3|G7K5D3_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi3g1v0190800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27605967..27608395) extracted from Lotus japonicus Gifu genome v1.2.
ACCGGGCTTCGATCCAACATTATATATACTGATATAGAGCTCTCCTAGTTACTCACTCAAATTCCAAGACCCTACTTCCT CAATTCAAATGAAGCTTTTTCCTCTCATGTTTCCTGCATCTTTATTTTGGTTATACCTTATTCTCTTTACTTTCAAACAC TGCCCAAAAACAACTGCTTCTATTTCCAGAAACCAAACAGACCATCTAGCATTGCTCAAATTCAAGGAACAAATCTCTTA TGACCCATATGGAATTCTAGATTCTTGGAATCATTCTACCCACTTTTGCATGTGGCATGGAATTACATGCAGCTCCAAGC ACCGAAGAGTAACAGAGTTGAGCTTAACAGGGTATCAGTTGCTTGGAACATTGTCTCCTCATGTTGGCAATCTCTCTTTT CTCAAAAAACTCAACCTCACAAAAAACAACTTTCACGGAAATATCCCACAAGAATTGGGTCGGTTGGTACGGTTGCAGGT ACTGCATCTCACAAATAACACCTTTGCAGGGGGGATTCCTACAAACCTAACAACTTGCTTTGATCTCAAATACGTGGAAA TAATCTGACTGGCCAGATACCGATTGAAATTAGCTCTCTCCAGAAACTTCAGGTATTGGAAGTTGTGCACAACAATTTAA CTGGTGAAGTCCCTCCATTCATAGGGAATCTTTCATTCTTAACGTTTTTCTCGGTGAGTCATAATAACATGGAGGGAAAT ATTCGAGAAGAAATGTGTCATCTCAAAAACTTGAGATTTCTAAAAGTGAGTGTGAACAAATTGTCAGGTACATTTCCTCC TTGTATTTACAACATGTCATCTCTTACTATCTTCTCAGCTGGAGTAAATGAATTTGATGGCTCTCTTCCACCCAACATGT TTCACACCCTCCCCAATCTCAAAGATTTTTCAATTGGCGGGAATCGAATCTCAGGTCCAATCCCCACTTCTCTTTCAAAT GCTTCAACCCTTGAAGTACTTGAAATTAGTGGAAATAATTTCATCGGACAAGTTCCAAGTCTAGAGAAGCTGCAACATCT TCGGTGGGTGCAAATGTTTTCTAATTATCTAGGTGACAAATCAACTAATGATTTGGACTTTCTGAAATCACTCACGAATT GTAGTAAGTTGCAACATCTGGTTATAGCCGATAACAATTTTGGAGGTCCTTTGCCAAATTCCGTGGGCAATTTATCATCC CAACTCAGTTACCTTGACCTTGAGGATAATTACATATCAGGAAAAATTCCTGTTGAATTAGGAAATCTAATTAACCTAAT TCTCTTGAACATGGAGAGTAACCACTTTGAAGGAACAATTCCGGTTGCTTTTGGGAAGTTTCAGAAGATGCAATTATTAG AGTTGGGGGGAAATAAGATGTCAGGAGATATTCCAGCCTCCCTTGGAAACCTAACTCAGTTGTTTCATTTGGGTTTAGAG GAAAACAACTTAGAAGGAAATATTCCTCCAAGTATCGGAAACTGTCAAAAGTTACAATACTTAGACCTTTCAAGAAACAA CCTCAAAGGAACCATACCTGTTGAGGTTTTTAATCTGTCCTCATTAACAAATTTACTAGACTTGTCACACAACTCACTGA GTGGCAGTCTACCAGTAGAAGTGGGAAGGCTGAAAAATATTGATTGGCTAGGTGTCTCTGAAAATCAACTGTCAGGTAAT ATTCCACAAACTATTGGAGAATGCATAAGCTTGGAGTACCTTTTTTTACAAGGGAACTCCTTCCATGGAATCATTCCATC CTCTTTGACTTCACTCAAAGGTCTTTTACAATTAGATCTATCACAAAACCGCTTGTCTGGGTCAATTCCTAAGGATCTAC AGAATATTTCCTATTTGGAATACTTCAATGTTTCCTTCAACTTGTTGGAGGGACAAGTACCAACAAAAGGTGTCTTTCAA AATGTCAGTGCATTGGTGATGACAGGAAACAAAAAACTTTGTGGGGGTATTCCAGAGCTGCATCTACTGCCATGTCCTGT CAAAAGTATGAAGCATGTAAAACACCATAGTTTCAAGTTGATAGCAGTAGTAGTTAGTCAAAAAGCTATTTCTTGTTGGT GAGATCATTTTTGAATTTTAAATGCTTTACTGTATAGTTTTTCCTTCCAGTAAATTGCTTATGTAGTTAATATTCGTTTT TTTCTGCCTCAATCTTGGTATGTATTTAAATTTTTATCCTGTGCTACGAAAGTAATAGGCTTATTCTTTCTCCAATTTCA GGTGTTCCTGCTCGTGTCTATGAAGCATAATGCACTGCAATTTGAGTTCAACCATCGGTGTGGATTTGTTCAATAAATTT CCTCCTGTTCTAGCCATTTGCATTTATGAGTTCATCTTTCATGTAACATCTATTAATAGTCGATGAATGCAATACTATAT CTAAGTGATGGACTTATAGTACTTTCCAT
CDS sequence (LotjaGi3g1v0190800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTTTTCCTCTCATGTTTCCTGCATCTTTATTTTGGTTATACCTTATTCTCTTTACTTTCAAACACTGCCCAAA AACAACTGCTTCTATTTCCAGAAACCAAACAGACCATCTAGCATTGCTCAAATTCAAGGAACAAATCTCTTATGACCCAT ATGGAATTCTAGATTCTTGGAATCATTCTACCCACTTTTGCATGTGGCATGGAATTACATGCAGCTCCAAGCACCGAAGA GTAACAGAGTTGAGCTTAACAGGGTATCAGTTGCTTGGAACATTGTCTCCTCATGTTGGCAATCTCTCTTTTCTCAAAAA ACTCAACCTCACAAAAAACAACTTTCACGGAAATATCCCACAAGAATTGGGTCGGTTGGTACGGTTGCAGGTACTGCATC TCACAAATAACACCTTTGCAGGGGGGATTCCTACAAACCTAACAACTTGCTTTGATCTCAAATACGTGGAAATAATCTGA
Protein sequence (LotjaGi3g1v0190800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLFPLMFPASLFWLYLILFTFKHCPKTTASISRNQTDHLALLKFKEQISYDPYGILDSWNHSTHFCMWHGITCSSKHRR VTELSLTGYQLLGTLSPHVGNLSFLKKLNLTKNNFHGNIPQELGRLVRLQVLHLTNNTFAGGIPTNLTTCFDLKYVEII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| SignalP_EUK | 1 | 30 | 30 | - | – | |
| Phobius | 10 | 22 | 13 | - | – | |
| Phobius | 23 | 30 | 8 | - | – | |
| PANTHER | 28 | 158 | 131 | 2.0E-45 | – | |
| PANTHER | 28 | 158 | 131 | 2.0E-45 | – | |
| Phobius | 31 | 159 | 129 | - | – | |
| Pfam | 36 | 75 | 40 | 4.0E-11 | ||
| SUPERFAMILY | 36 | 156 | 121 | 1.13E-21 | – | |
| Gene3D | 37 | 154 | 118 | 7.5E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0190800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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