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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0192700 |
| Transcript ID | LotjaGi3g1v0192700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT5G54650.1 formin homology5; Swiss-Prot: sp|Q94B77|FH5_ARATH Formin-like protein 5; TrEMBL-Plants: tr|G7IKM7|G7IKM7_MEDTR Formin-like protein; Found in the gene: LotjaGi3g1v0192700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27814890..27819921) extracted from Lotus japonicus Gifu genome v1.2.
ATCAATTGCATGAATTGGTTCCTTTTCTGGTCTCCCACACGTTAAATTTGATTGGTTCTTCGCCTTCCGTTGCAACATCA TCAGTTTAATCACATAGCAAATCATACGTTACTCTACCCGAATCAAATTTTGGATTATTCTGAAACATTTGGATTTGCCT CATACCATTCTGATTCTGCGTTTGTAAAATTGAGAGAGAGTTCCAATTTTTGTTGACAAGTTGAACAATTAGCAAATGTG GATATTGTTATAGGCTTAGTGACAATTATTTGAAAGCTAATTAATGGCTCTTTGATAAGGTGGTGCATGCATGTGTTGGT GAATTAGAAGGATTTTCAAGTTCAATGAGATGAAAAGGGGATCATGCATTTTTGTTGGTGAATTTACAAGGAATGGAATT GACAAGACCTAGTTATGCCGTTGTTCTTGTAATTCTTCTTTGTGCCTTGGCTGAAAGGGGCTCAGATGGGAAGAGATGGA AAGCTGAGGAATTTTATACAGATCATGCTGCTTTCTCATCTTCCCTTCATCTCGACAGAAAAAAGGTATCTAATTCATGA TTTTGATCAGTATTCCAAATGCATATGGAATAGACTGCTATAAATTTATCAAAATGGTTCTTTTTTTGTTTATTTTTATT TTTATAGTTTGACTGCTTTTATTCTTCTGCTTAGTGATGTACAAGTTATTGTTGTCTAGGTTGCAGAGAAACTGCTTTAA ACAATGTATAGCAGAGAAGGTCTAGGATCAATTCAGTGTGAATTATTCAAGTCTACTATAATTTATCAAATAACTATTTT TGATACATAAATGGTCATTAACAACCAATTTTATCGTGAGCTCAAAAAATTAAATGAGGTTCTTGAGCACCTTGATCTAA CAAAAACATGCCTAGCTAGGAACAATCTGTAGTGAAGAACACCTTGAACTTGCCCAGTTATGTGCCTCTCTGGAAATCCT TCTACAATTGATTCTAAAGTCGAAATCAGTTATAGTGTGAAGCATTTGTGCGTAGTTTCTATGTGTCATAATTGATTTTG AGAAAAACGAATTTGATCATAACATCCAATATGTCGCTTTCGTTATCACTTTGTTGTCTGCTGAATTGCATTCATTGAAT TGTTTGACATAGGCAGAGCAGGTGTGGAAACATTGCAGGAAAGAATTGATAGAGAGGAATAATGATAGTAAAGATTTTGA CTTGCATCTATTGGATGAAAGTGGTGACTTGCATCTATTGGCAGATATATCAACTCTTTCAATAGAAAATGATATAAATG AAGCAGCTAAATATCTGCCACCCCATATGAAGCAATACTTTTTGGATTGCATGAGAAACAAGAATCCTCCTACTCCTGTT TCAGAAGAGCAGAGAAATAGGCTGAAGAAGCATTATATGTCACTCTTTGGTTTAGCAAGTGGTCATAGATATTTGCTCTC CGAGACACCACCATCAGGTTCTAATTTTGTTCCATCATCACCAGCAGCCAATTCTCCACCTCCAAGTCCAAAGCTTCCGT ATGACCCACTCATTCAAGACTTTTTTGTGCCATCTCCACCACCTCCTCCTTCTCCACCAGTTGATCCCCAGCATGATAAT AACAAACAAAAGAAAGCACTTATTATTGCTGCTGCTGCATCAGGACTTATAATCTTAATAGGCTTGCTCCTCTGCTATTT TGAGGTCAGGAGGAGGAAAAGAGTTGACAAAGGTGACAGGGATTTACTCATAGTAAGCTCAAGTGATTTGTCTAATGGTA TGTCTATGTCTAGTTTTTCGATATTAACCTATTGAGGCAGTGTAACATCAAAGTTTAAAAGGGTCCTTCTTTCCTTTTAT TTCAGGTTCAGAAAAGTCTGTTGGTTTGGAAAATTCTGATATGCAAGAAGCTGGGATTAACTATGGAAAGAACCCTACTC TTGTTAGGAATTTGTCCATTAAGTCTGAAGACCGCAATGCCTCAATGGATGAGATAACATCATCAGATGACAAGGGACAA GTACAGTTGTCAATATTAAAACCTCCTCCGGGAAGATCAGCCCCGGAGCCTCCACGACCGCCACCGCCACCTGGTCCTAG GCCTCAGCCTCCACCTCCTCCAAAAGTAGCTCAGCCCCCACCTCCTCCAAAAGTAGCTCAGCCTCCACCTGCTCCTCCCA AACCAGTGGCAGGGAGATATCAACCTTCACCTTTAGGACCACTACGTTCTGGTGAGGGTGCTGAATCCGATGCTCCAAAA CCGAAACTGAAGCCATTTTTCTGGGATAAGGTTGCTGCAAATCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGG GTCATTCCAGTAAGAATACTTAAGCCTATCAGAATCAATGCTTCCATTCAAAATCAGAAAAATGTACATTTATGATTGCT AATTTTTATGACAACATCCCAGGTTCAGTGAAGAAAAGATAGAATCCTTATTTGGCTGTGCCAACCAGAACAGAAATGAA AGAAGAAAAGAATCTCCATTTGTGGAATCTTCTGTTCAGTACATTCAGATTATTGACCCCAAGAAAGCACAAAATTTATC AATTCTTTTACGTGCTTTAAATGTGACACCAGAAGTAGTTATTGACGCCCTAAAAGAAGGTAACTCTGTGAGTGTGGGTG TGTTTATCTAGGGATACCAAGGAAGGACATTTTAATCCAAAGTATAAGGAATTCGTGACTAACAATGATAGTGTAGCTCC AGTTAAGTTGAATTTTCTCTGTAAGTGTATAGTTATTAGTTTCTGTTGAGATTTTGAACTCATTTCATGTCATTTAGTAT TATATGATGCTGTTCGTTAGACATATGTGTGTTCATGACACCAAGAATTAGTGCTTTGTTCTTTCTTCTATCTGTACTGA GGAGTGAGGACATTGTAAACTCTTGCCCTGATTACGGTTTGGTGAATGCGTTAGGGCTTACATTTTGTACATTGAACTAT GAAACGAAAGGAATTCTAAATTTTTGCAATTATGGTTCTGCTTCACCAATTTTCGCATTCAAAAAAATGAAAAATCAAAG GCAACTATAAATTTTTAGCATGTTTCTAGATTATTATTTGCATATCAGTGTGAATTACTTGCAATATGTTGATTGTATCA GGTAGTGAGATTCCTGTTGAGCTCATCCAGACATTATTGAAGATGGCGCCAACGACAGACGAGGAACAGAAGCTAAGGTT ATTCACGGGCGACCTCTCTCAACTTGGGCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCATTAGCTTTCAAAC GTCTTGAATCTCTATTGTTCATGTTTACACTTCCAGAAGAGGCCTCAAGCATTAAGGAGTGTTTTTCAACATTAGAGGTG CGAGTGAGATTCGACAAATTTTCTTTTTTGTTTTCAATTCCAATCTAAATTGCATGCTATCCAACTCTTTTTGCAAGTGA AAATGGAAGGAGTAGTAGGGAAGTGAATTTGGTTCTCATTTTTGTGGTTGTTGCATCTAATTTTATTGGCAGGTTTCTTT CAACAAACTAAGAAAAAGCAGGCTCTTCCTAAAGCTATTAGAAGCAGTTCTCAAGACTGGAAACCGCATGAATGATGGCA CCTACCGCGGTGGTGCTCACGCATTTAGGCTCGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGCAAGACC ACACTACTGCACTTTGTGGTTCAGGAGATTATACTTTATGAGGGCAAAAGAGCTGTGAGAACAGCAAAAGCAAGTGGAAG CCATTCAGGTATCAAAACTGAGGATTTCATTGAGGATTCAAATGGAGAATCAGAAGAGGACTATCGCAGCCTTGGCCTTC AGGTTGTTTCAGGTCTAAGTAGTGAACTTGAAGATGTGAAAAAAGCAGCAGTTATAGATGGTGATGCACTAACAGCTGCA GTGTTGAAACTTAGTCATTTATTAGCAAAAAATGAAGACTTGCTGAATACTGATCTGAAGAATCTCCAAGAAGAGAGTGA GTTCCAACATTCCCTTACAAGTTTTGTGGAGAAAGCAAAAGCTGATGTGTCATGTCTGATAGAGGAGGAGAAGAGGATAA TGGCTGAGGTTAAGAGCACAGCAGATTATTTCCATGGGAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTGTGATTGTT CGCGATTTCTTGATAATGTTGGACAAGGTATGCAAAGAGGTGAAAGACACAACAATGAAGACGAGGAAGGCTTCTGCCAA GAAAGAGGCTTCATCTGTGTCATCCTCACCAGAGACTAGTCATCATTCACCTTCTGATATGCATAAGCGACTGTTTCCGG CCATTGCAGAACGGAGAGTGCATGACTTTAGTTCAGATGATGATGATGATTGGAGCTTACAGACGTAGCTTTCCTATGAA GTTATGCAAGTGTGACTTGAGAGCTTACTATTCTACTTCATCAAGTGGCAGGTGTACGTTGCTGCCTACAATGACAAGGA AATGAAGCCCCTCTAACTTGTTGAAATGTATCTGCTACAATGCTGCTAAAGAGTGACTCTTGATCAAAGGAAGTTACCTG ATGTCTGCTATGATGTTCCTCATCATAGTGTGAGCAGCAAGTGGGTGCTCTTTCCAACCTATCTCGCGATGAAAATCAAG ATTCAACCAAGATTGCATCTTAGGTAACACGGATCAAGGTTGTAACCAACCTCCCCTACAGCTACATACAAGTGCTTATA GGGAAGGAGAGAGATTGATTTGTTGTTTGTTTATTTTACGCCCCCACTGATTGGATAGATGTGGTTTTGATAGGTACCCA TAGTTAGTTAGTAGTTTAGTTAGTTAGTAGTTTAGTTAGTTAGTTTGAGAGAGTTAGTTGAGAGTGATAGAGAATGTTAC AAATATGAGAGACTTAGACTAATAACATCTTTGGGATCATCATTGTCGGGAATTAGGAGAAATGCTGAGACTCTCGAATT ACACAACAACCATTGTAGTTTCTATTGTTGAATAACATCAGTTTTCTTCTTCTTATTGGTTGATTTTTATCA
CDS sequence (LotjaGi3g1v0192700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATTGACAAGACCTAGTTATGCCGTTGTTCTTGTAATTCTTCTTTGTGCCTTGGCTGAAAGGGGCTCAGATGGGAA GAGATGGAAAGCTGAGGAATTTTATACAGATCATGCTGCTTTCTCATCTTCCCTTCATCTCGACAGAAAAAAGGCAGAGC AGGTGTGGAAACATTGCAGGAAAGAATTGATAGAGAGGAATAATGATAGTAAAGATTTTGACTTGCATCTATTGGATGAA AGTGGTGACTTGCATCTATTGGCAGATATATCAACTCTTTCAATAGAAAATGATATAAATGAAGCAGCTAAATATCTGCC ACCCCATATGAAGCAATACTTTTTGGATTGCATGAGAAACAAGAATCCTCCTACTCCTGTTTCAGAAGAGCAGAGAAATA GGCTGAAGAAGCATTATATGTCACTCTTTGGTTTAGCAAGTGGTCATAGATATTTGCTCTCCGAGACACCACCATCAGGT TCTAATTTTGTTCCATCATCACCAGCAGCCAATTCTCCACCTCCAAGTCCAAAGCTTCCGTATGACCCACTCATTCAAGA CTTTTTTGTGCCATCTCCACCACCTCCTCCTTCTCCACCAGTTGATCCCCAGCATGATAATAACAAACAAAAGAAAGCAC TTATTATTGCTGCTGCTGCATCAGGACTTATAATCTTAATAGGCTTGCTCCTCTGCTATTTTGAGGTCAGGAGGAGGAAA AGAGTTGACAAAGGTGACAGGGATTTACTCATAGTAAGCTCAAGTGATTTGTCTAATGGTTCAGAAAAGTCTGTTGGTTT GGAAAATTCTGATATGCAAGAAGCTGGGATTAACTATGGAAAGAACCCTACTCTTGTTAGGAATTTGTCCATTAAGTCTG AAGACCGCAATGCCTCAATGGATGAGATAACATCATCAGATGACAAGGGACAAGTACAGTTGTCAATATTAAAACCTCCT CCGGGAAGATCAGCCCCGGAGCCTCCACGACCGCCACCGCCACCTGGTCCTAGGCCTCAGCCTCCACCTCCTCCAAAAGT AGCTCAGCCCCCACCTCCTCCAAAAGTAGCTCAGCCTCCACCTGCTCCTCCCAAACCAGTGGCAGGGAGATATCAACCTT CACCTTTAGGACCACTACGTTCTGGTGAGGGTGCTGAATCCGATGCTCCAAAACCGAAACTGAAGCCATTTTTCTGGGAT AAGGTTGCTGCAAATCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAGTGAAGAAAAGAT AGAATCCTTATTTGGCTGTGCCAACCAGAACAGAAATGAAAGAAGAAAAGAATCTCCATTTGTGGAATCTTCTGTTCAGT ACATTCAGATTATTGACCCCAAGAAAGCACAAAATTTATCAATTCTTTTACGTGCTTTAAATGTGACACCAGAAGTAGTT ATTGACGCCCTAAAAGAAGGTAGTGAGATTCCTGTTGAGCTCATCCAGACATTATTGAAGATGGCGCCAACGACAGACGA GGAACAGAAGCTAAGGTTATTCACGGGCGACCTCTCTCAACTTGGGCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATA TTCCATTAGCTTTCAAACGTCTTGAATCTCTATTGTTCATGTTTACACTTCCAGAAGAGGCCTCAAGCATTAAGGAGTGT TTTTCAACATTAGAGGTTTCTTTCAACAAACTAAGAAAAAGCAGGCTCTTCCTAAAGCTATTAGAAGCAGTTCTCAAGAC TGGAAACCGCATGAATGATGGCACCTACCGCGGTGGTGCTCACGCATTTAGGCTCGACACACTTTTGAAACTTGCAGATG TAAAAGGAACAGACGGCAAGACCACACTACTGCACTTTGTGGTTCAGGAGATTATACTTTATGAGGGCAAAAGAGCTGTG AGAACAGCAAAAGCAAGTGGAAGCCATTCAGGTATCAAAACTGAGGATTTCATTGAGGATTCAAATGGAGAATCAGAAGA GGACTATCGCAGCCTTGGCCTTCAGGTTGTTTCAGGTCTAAGTAGTGAACTTGAAGATGTGAAAAAAGCAGCAGTTATAG ATGGTGATGCACTAACAGCTGCAGTGTTGAAACTTAGTCATTTATTAGCAAAAAATGAAGACTTGCTGAATACTGATCTG AAGAATCTCCAAGAAGAGAGTGAGTTCCAACATTCCCTTACAAGTTTTGTGGAGAAAGCAAAAGCTGATGTGTCATGTCT GATAGAGGAGGAGAAGAGGATAATGGCTGAGGTTAAGAGCACAGCAGATTATTTCCATGGGAATGCAGGGAAAGATGAAG GGTTGCGTTTGTTTGTGATTGTTCGCGATTTCTTGATAATGTTGGACAAGGTATGCAAAGAGGTGAAAGACACAACAATG AAGACGAGGAAGGCTTCTGCCAAGAAAGAGGCTTCATCTGTGTCATCCTCACCAGAGACTAGTCATCATTCACCTTCTGA TATGCATAAGCGACTGTTTCCGGCCATTGCAGAACGGAGAGTGCATGACTTTAGTTCAGATGATGATGATGATTGGAGCT TACAGACGTAG
Protein sequence (LotjaGi3g1v0192700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELTRPSYAVVLVILLCALAERGSDGKRWKAEEFYTDHAAFSSSLHLDRKKAEQVWKHCRKELIERNNDSKDFDLHLLDE SGDLHLLADISTLSIENDINEAAKYLPPHMKQYFLDCMRNKNPPTPVSEEQRNRLKKHYMSLFGLASGHRYLLSETPPSG SNFVPSSPAANSPPPSPKLPYDPLIQDFFVPSPPPPPSPPVDPQHDNNKQKKALIIAAAASGLIILIGLLLCYFEVRRRK RVDKGDRDLLIVSSSDLSNGSEKSVGLENSDMQEAGINYGKNPTLVRNLSIKSEDRNASMDEITSSDDKGQVQLSILKPP PGRSAPEPPRPPPPPGPRPQPPPPPKVAQPPPPPKVAQPPPAPPKPVAGRYQPSPLGPLRSGEGAESDAPKPKLKPFFWD KVAANPDQAMVWHEIRAGSFQFSEEKIESLFGCANQNRNERRKESPFVESSVQYIQIIDPKKAQNLSILLRALNVTPEVV IDALKEGSEIPVELIQTLLKMAPTTDEEQKLRLFTGDLSQLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKEC FSTLEVSFNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAHAFRLDTLLKLADVKGTDGKTTLLHFVVQEIILYEGKRAV RTAKASGSHSGIKTEDFIEDSNGESEEDYRSLGLQVVSGLSSELEDVKKAAVIDGDALTAAVLKLSHLLAKNEDLLNTDL KNLQEESEFQHSLTSFVEKAKADVSCLIEEEKRIMAEVKSTADYFHGNAGKDEGLRLFVIVRDFLIMLDKVCKEVKDTTM KTRKASAKKEASSVSSSPETSHHSPSDMHKRLFPAIAERRVHDFSSDDDDDWSLQT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 3 | 852 | 850 | 0.0 | – | |
| PANTHER | 3 | 852 | 850 | 0.0 | – | |
| Phobius | 9 | 16 | 8 | - | – | |
| Phobius | 17 | 20 | 4 | - | – | |
| Phobius | 21 | 212 | 192 | - | – | |
| MobiDBLite | 157 | 207 | 51 | - | – | |
| MobiDBLite | 168 | 203 | 36 | - | – | |
| Phobius | 213 | 234 | 22 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 235 | 856 | 622 | - | – | |
| MobiDBLite | 301 | 392 | 92 | - | – | |
| MobiDBLite | 321 | 371 | 51 | - | – | |
| Gene3D | 383 | 640 | 258 | 3.2E-67 | ||
| ProSiteProfiles | 384 | 814 | 431 | 49.27 | ||
| SMART | 384 | 803 | 420 | 4.4E-94 | ||
| Pfam | 386 | 788 | 403 | 2.1E-102 | ||
| SUPERFAMILY | 453 | 811 | 359 | 1.57E-82 | – | |
| Gene3D | 674 | 817 | 144 | 3.1E-15 | ||
| MobiDBLite | 799 | 832 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0192700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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