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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0208600 |
| Transcript ID | LotjaGi3g1v0208600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT5G01390.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|V7AJV6|V7AJV6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0208600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:30794253..30798576) extracted from Lotus japonicus Gifu genome v1.2.
GGGCCTAGTATTGATATCCTGTCTCAATCCTAGTACTAGTGTAAAGTACAGTTTGTGTTTTCTAGAGCCCAGATATGTTT GTCTCTCATCTTCACCGGTGACTCAATCACTCACACACATTGCTCCGGCGCCACCACAAAACTCAGGTTGATCGGAAAAA GCCATGGGAGTGGACTACTACAAAGTCCTTCAGGTAGATCGAAGTGCCAAAGATGATGATCTCAAGAAAGCTTATCGCAA GCTTGCCATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAAGAAGCTGAAGCCAATTTCAAGAAAATCTCTGAGG CCTATGATGTATGTTTTTTCATGCCACACTACTCTCTTTTAATTTACTTGATGTAATGCCAATTGGGTTTTGAAAACATG CTGATTCTTGTAGCCAAGTTTATTCGTTTTTTGGATTTCTAGGGTACAATTTGAGATTTGGGTGGGTGTTAAATTTTGTG CTTTTCTTGTGTTTTGAATCATTGGAATGTTGGGTTTTCCTAGTGATTTGATTTGTGAATAGGTTTTGAGTGATCCACAA AAGAGAGCGGTGTATGATCAGTTTGGTGAGGAGGGGTTGAATGGCCAGGTGCCACCCCCTGGTGCTGGCGGATTTTCCGG TGGCGGTGATGGCGGGCCGGCGTCGTTCCGGTTTAATCCGAGAAGTGCTGATGATATATTTTCGGAATTCTTCGGGTTCT CGAGTCCCTTTGGTGGAATGGGTGATATGGGTGGTCGTGCTGGTGCGTCTGGCTTTCCCAGGGGCATGTTTGGGGATGAC ATTTTCAATTCTTTTCGGAGTGGGGCTGGAGAAGGCTCTGGCAATGCACTAAGAAAAAGTGCTCCCATTGAGAGAACATT GCAATGCAGCTTGGAGGATTTGTACAAAGGGACTACCAAAAAAATGAAGATTTCCAGGGATGTTACTGATTCCATTGGGT AAGCTATCTAGTTTAACTTCTTAGCATGTTTTTCCTTTTTTCACTTTCATGAAGAAAATTGTGAATTTACTTATAGTAAT TTTAATTGGATGGATTCACTTATGTAATGTGTTGTTGTTTGATGACCAGTTCCCTATATCAGTTTTGTAGATTTGAAATT AAACCATTTATTTGCTGTCTTTTGTGCTCCGAATAATCAATTTTCCACAAATAAAGTGTTGGGGTTCTGAAATGGATTGA GACTTAGATCTTTGATGCAATTGCAATCAATTTTTTTATTATGGTAGTTCTGAATTGGCTCAGCACATTACTCTGTGATA TGCTGTTTCCTTGAAGAGTTTTCCTAATATTCTAATGCAAATATATGATCGCGGTATTTTGCTAGGTATCCTAGTAACTG TAGACCTGTGTTCTTCATTGTGTTTATGATTTCATCCAATCCAAGACATGAATAGAAAAAGAACTACATGTTACAAGTTG ACTTCTTCATACAAACTTTTTATGCGTGATTTCCAAGGTTGCTATTAAGATAGTGTAAATGTGTAACTTTAGGCCATATT TTATCTACTGGTTCCTTTGTTTTTATTTTACAATAAAAAAGTAGGGACTTTTGTTCTTATAGAAGTAGATTATTTTTCAT TTATGTTTTTCTGTGTTCAATTATCCAGAACTGTGACTAAGTATGCAAGTGTTGTGTATTTATCTTATCTTTATTTTTTG CTTGATCATCTTCGTCCTGTAACTTTCTGCTCTTGTTGGTACAAAACTTTTGCTATGTTTATCCGCACAAAGGGGATGCC ATTTGTGTTTCATGAATGCTGAAGTTCAGGAGATTAGTTGCATATAGTTTTGTTAGGAGAAAAGCATCTTTGTGTTGTTC TAATCCAAAGGTTCTTATTGCCTGTATGGCTGTATGGTGACAATACCATATACGGTGACAATACTACTTAATGCTAGTTG TTTATGTACCCAAATCTTGAGGGGACTGAATCTACAACTAAAATAAGGATGTAAAATGTTGAGTTTAAGCCTGCAAAGCT GGGATTGAGATCAATGATTTTTTTATTGGCATTGAAAAAATAAAAGCGGAGTTTAGTCATACATGAATATTCAGTTCAAG TCCTTCGTGATGGAAGAAGCCACTTGTCATAAGATGTCATTGGTCATGAACTGGCAAAAAGACCTTAGACTTCTATTCCA ACAACAGCTGATTCAATTGCTATTTTCTATTCTAAGCCTTAGTCATCTATTCGATCAGCGGCCTTAGGTACATTGATGAT CTTTGGATGCATCATTATTGATAAGTAGAGTCCAGCCCATGAGCATCATGGGCGTGTAACAATGATCAACTAAAAGAAAA AGAACAGCGAGAGCGACGTGTCAAATCCTATTCCTATGTTCTTTTGCTTCCTGATCATTGCTTGTCAGTTCTATTATTAT TGTAGATGACCAGGGAAGTTTATATTTATCAGACCTGTGATAGTGTATGAAACTAAGGCAAGGTGGAAGAATGCGTATAT CCAAATGAATGAAAGTGAAAAGTGCACTTTAGTTCATGATTGAATTGAAACTTGGTTGAGTTAAGAAGTACTCAGCTCAA TATTTGCTGGCTTACCTTGTTACTGCCCTGAACAGAATTTAGGTATAGCATGCAAAGATATCCATTTTTATTATCTCATT TGGCCTTCAGGTGAGACTTTAATATTACAAATGGTAAGAAAGTGGATTAATATTGCATTGATTTAGCTAGTCTTATTCTG GGAGTAAGTTATATGAGATGAGTGGACTGGTAGTTATGTTTGTTCTCTTGGTAGAGATATTTTGCTTTTAAGTGTTGATG ATGGGAATCTTTTGAAATTCCTATAGGCCCCGTATGTTAAGTGATGCAGGTACGTTATGGTAGAATATAAGTTCAAGTAT TGTAGGTTCTCATAGCATCTTCTTGAGGTCATTGAGTTGTGATCGGTATACATGTCTTGTTTTTCCATGTTGAAACCAAA TTTTGCATGTATACGATACCCGCTCACATATAAAATTTTCTAAGTGAACATTTGAAACTTAAGCAGTTAGGCATGTTTAT TTACATGTCTTATAGTCCAGATTGAGAATGTTATAAACAGAAAATACATGTCAGCTAGTGAATGTTTATTGTTCTCATTT AATGAAAACGTTCCTTCATGTAATCAACTAATTCATCTGGCAGAAAATAAGTGACGTAGTTACGTTGCAAAACTTTTCAT AAGTTAGTAACTTCACAAATATAAGAAACCGAAGTCTGCATTACCCTTCGAGGCTATGTTTTATTTATATCATTTTTTTG TTGACATAAGATCTGCGTAGCATATGATTTATTTAAAACTAGCTTAAAATTAGAGTACTGAATTGACTGGCCATGGAACT AATATACTATATGTTTCCTCATTCCACAGGAGGTCCACCACAGTAGAGGAAATTCTAACCATTGAGATCAAGCCGGGATG GAAGAAAGGAACAAAAATAACTTTTCCTGAAAAGGGAAATGAGCAAAGAGGAGTTATCCCCGCGGACCTCATTTTTATCA TCGACGAGAAGCCTCACAGCGTCTTTAAGAGGGACGGCAATGACCTTGTTGTCACGCAGAAGATATCTCTTGTAGAAGCT CTAACCGGTTACACGGCGCAAATCACAACCCTTGATGGGAGGAATCTTACTGTCTCTGTCAACAACATCATTAGTCCAAC ATATGAAGAGGTTATTAAAGGAGAGGGTATGCCGATTCCTAAGGAACCTTCGAAAAGGGGAAACTTGAGAATCAAATTCA ATATCAAGTTTCCCTCCAGACTCACATCCGAGCAGAAAACTGGCATTAAGCGGTTACTGACATCTCCCTAAATGCAGGTG GTACCTCCTCTCCATACCACATACCAAACTGTGTAAGAATGGAATTACTTCATTTACAGTTCATGATTTGCAAATGGAAA TACTTGCTTTGATTAGAACAGTTTCTTAGAAGGTTGATATTTGTTGGTTGTTTCATGTTGGATTTGTTTTTTGTCTTGAG TGAAAAAACTTCTTAACCACTTGTGTACTCGTTTCTATGAAAAGTCATGGCAGAAATTAATTTCTGTATAACGTAAACTT CTCATTTGTTTAATTGTTCTTCTTTATCATTTCAGCAAACTCTGCACTTTATAGAGACAGTTGAAACTACTTGATGATGA CCTTACTTAAGTTTGGTGGTTAAACTATATGTTGGTGAATGTAAGAGGTTTTATCATTATCAGATTCTTTTAAATATTCA TCTTGATTAAAAAAATATAAAAAGAGAAAATTGAATATTTATTACTCCATGAACTGAAATGTGGATATGTGGATATAAGA GAGA
CDS sequence (LotjaGi3g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTGGACTACTACAAAGTCCTTCAGGTAGATCGAAGTGCCAAAGATGATGATCTCAAGAAAGCTTATCGCAAGCT TGCCATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAAGAAGCTGAAGCCAATTTCAAGAAAATCTCTGAGGCCT ATGATGTTTTGAGTGATCCACAAAAGAGAGCGGTGTATGATCAGTTTGGTGAGGAGGGGTTGAATGGCCAGGTGCCACCC CCTGGTGCTGGCGGATTTTCCGGTGGCGGTGATGGCGGGCCGGCGTCGTTCCGGTTTAATCCGAGAAGTGCTGATGATAT ATTTTCGGAATTCTTCGGGTTCTCGAGTCCCTTTGGTGGAATGGGTGATATGGGTGGTCGTGCTGGTGCGTCTGGCTTTC CCAGGGGCATGTTTGGGGATGACATTTTCAATTCTTTTCGGAGTGGGGCTGGAGAAGGCTCTGGCAATGCACTAAGAAAA AGTGCTCCCATTGAGAGAACATTGCAATGCAGCTTGGAGGATTTGTACAAAGGGACTACCAAAAAAATGAAGATTTCCAG GGATGTTACTGATTCCATTGGGAGGTCCACCACAGTAGAGGAAATTCTAACCATTGAGATCAAGCCGGGATGGAAGAAAG GAACAAAAATAACTTTTCCTGAAAAGGGAAATGAGCAAAGAGGAGTTATCCCCGCGGACCTCATTTTTATCATCGACGAG AAGCCTCACAGCGTCTTTAAGAGGGACGGCAATGACCTTGTTGTCACGCAGAAGATATCTCTTGTAGAAGCTCTAACCGG TTACACGGCGCAAATCACAACCCTTGATGGGAGGAATCTTACTGTCTCTGTCAACAACATCATTAGTCCAACATATGAAG AGGTTATTAAAGGAGAGGGTATGCCGATTCCTAAGGAACCTTCGAAAAGGGGAAACTTGAGAATCAAATTCAATATCAAG TTTCCCTCCAGACTCACATCCGAGCAGAAAACTGGCATTAAGCGGTTACTGACATCTCCCTAA
Protein sequence (LotjaGi3g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVDYYKVLQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEANFKKISEAYDVLSDPQKRAVYDQFGEEGLNGQVPP PGAGGFSGGGDGGPASFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRAGASGFPRGMFGDDIFNSFRSGAGEGSGNALRK SAPIERTLQCSLEDLYKGTTKKMKISRDVTDSIGRSTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLIFIIDE KPHSVFKRDGNDLVVTQKISLVEALTGYTAQITTLDGRNLTVSVNNIISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK FPSRLTSEQKTGIKRLLTSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 337 | 337 | 1.9E-173 | – | |
| PANTHER | 1 | 337 | 337 | 1.9E-173 | – | |
| Gene3D | 2 | 152 | 151 | 2.4E-36 | ||
| SUPERFAMILY | 3 | 93 | 91 | 3.79E-32 | ||
| SMART | 3 | 62 | 60 | 2.1E-30 | ||
| CDD | 4 | 59 | 56 | 1.77275E-25 | ||
| ProSiteProfiles | 4 | 70 | 67 | 24.389 | ||
| Pfam | 4 | 67 | 64 | 8.7E-27 | ||
| PRINTS | 6 | 24 | 19 | 1.8E-28 | ||
| PRINTS | 24 | 39 | 16 | 1.8E-28 | ||
| PRINTS | 42 | 62 | 21 | 1.8E-28 | ||
| ProSitePatterns | 47 | 66 | 20 | - | ||
| PRINTS | 62 | 81 | 20 | 1.8E-28 | ||
| MobiDBLite | 72 | 99 | 28 | - | – | |
| CDD | 162 | 325 | 164 | 3.04579E-54 | – | |
| Gene3D | 163 | 241 | 79 | 2.8E-31 | – | |
| SUPERFAMILY | 164 | 243 | 80 | 5.89E-17 | ||
| Pfam | 164 | 322 | 159 | 1.7E-45 | ||
| Gene3D | 243 | 323 | 81 | 2.9E-28 | – | |
| SUPERFAMILY | 245 | 331 | 87 | 2.88E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0208600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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