Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0218900.5

Overview

Field Value
Gene ID LotjaGi3g1v0218900
Transcript ID LotjaGi3g1v0218900.5
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G54030.1 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|B9FDE0|BSK3_ORYSJ Probable serine/threonine-protein kinase BSK3; TrEMBL-Plants: tr|A0A0B2RDJ7|A0A0B2RDJ7_GLYSO Putative serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0218900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:32961587..32966740) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGGGCTCGTTGCTCTAAATTCTCCTTCTGCTGGTTCCATTCCCACCTTAAACCTTCTGTCCTTGAATCCTCTGACCA AGGTTTATGTTGTTATCTTTTTGTTTTCAGCACACACACACACCCTTTTGGCTAGAACCTCTTGTTCCACTTAAAAATGC TATCTATATTGCAGAAAATGGTGGCAAGGGTGAAAAAATCTTGTGGCCTAGTTTTGCTGAGTTCAGCTTGGAGCAACTGA AGGCCGCCACAAATGGTTTCTCCTCAGAAAACATAGTCTCTGAGCATGGTGAGAAAGCTCCAAACGTGGTTTACAAAGGG AAACTTGAGAATGGACAGTGGATTGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCATCGTTTG TCACTTGCACTTTCAGTGCTTCATTTACTCTTACCATTCATGTATTTGGTTTCTTGTATTGAGCTTGATGTTGTGTTGTG TGTGGTTGTAGGAAGAAGCCACACAAGTGGGGAGCCTCAGAAGTGAACGTTTGGCCAATTTGGTTGGTTACTGCTATGAA GGGGATGAGAGGCTGCTAGTAGCAGAGTTTATGCCACATGAAACTCTGGCTAAACATCTCTTTCATTGTGGGTTTTTTGT GATCACTATAACTTTTTGCAACTATGTTAGATTAAATAGCATGTTTGGAAAACAGAATCAATTCTACTTGGTTGAAATTA ATTTAAACCCATTGAAGTTATGTTTGAATGTACCGGTAAAATTGATTTCATGGGTCAAGAATTGGATTCACTTACCACAA CATATAGTTTCTTATGCGCTGAACATATCAATTCTGAGATTTTTTTAATTGAATTTCATAATACTACCCTACAAAGCCCC CTTTTTCAAAAAGGTACCCCAACATAAATCATAACATTTAAACTCACGTTTGTCAGACGCAATTTAAGTAGAATCAGTTC TTTCCATAATCAATTCTGCTAACGCCTTATCCAAACACACACCGAGTCTTTCATTAAGTTTGTCTTTGGTCTTTGAATTC TGAACATGGGAAAAAATATATTATGGTTAACTTGGTGCAGGGGAGGCACAGCCTATGAAATGGGCAATGAGGTTGAGGGT AGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGA TCTTGTTTGATCAGGTATGAGGGCTTTGTATCATGATCCCAGTTGGATACGAAATAAAGAGCACTTATTGAAGCTTATAC ACCTAGAAAAATCACTGGATAAGCTCCAATATGTGCTCTTTGTTCCACATCCAAACGGGCTCTATATGCTTCAAGTTCCC TTTGTAATCGATCCTTGTTTCTTGCTTTTTATGTTGTATCAACAGGATGGCAATCCTAGGTTGTCTTGCTTCGGGCTCAT GAAGAACAGCAGAGATGGCAAGAGTTACAGTACTAACTTGGCTTTCACTCCTCCTGAGTACTTAAGAACTGGTATAGCTC TTAGGATGTTAGTGTGTGATGCATGGGAGCATGTCCTTGATCTTTGGCATAACTTTAATAAGAGAAATCTAGGAAACTGC TACAAATTCTCGAATTTGCATCAATTGCAGCCAACTACTCTCTACACCCCTCTGCAGTAGCAATACTACATGCTTTAAAT TATCTGTCAAAATGCATTTAGTCTTACATCCTCTTGTGCAAACATATTGCTTTGTTTAATTGTTCTGTTTTCAGTTTTAG GAATATTAAATTTTGGCTAAATTATTTGGATATTTATGTTGAAAATCATCTTGTAAAAGACATCTTTCTCTCTTTTTTTT TTCTTGTTTCATTACCCTAAGGTTAATACTCCTTTTGTATGGTCTCTCTCAAATAGAAAGCATGTTGAGAGAAACGTATG TGGAATCAGTCTGCATATGCTTGCATGGATTGGTATGTGACAATTTTATTTTTTTGTACATTTGACCTTATATGCAGGTA GAGTGACGCAAGAGAGTGTGGTTTACAGTTTCGGAACCCTGTTGCTAGACCTCTTGAGTGGTAAACATATTCCCCCAAGC CATGTAAGTTTTAATTTCTATCCATTATTAAGTCCTGAACAAACTCTAATTTATGTTCAGACCATTGATTTTAGACAAGA ATGTTAATGGCTGATATAATTGCTTAAGAATACACATTCAGCATGTAGCAGTAGGACATATTGTCATTTACATGTAAATC ATCATTAAGAAATTTTGTATTGCACTTGCTCACAAAATGATCATTGGTACTAAACAGTTTATAAGTGTGTGTCCACCAGT TGAGATAATGTGAAATCACAATCATCCTAATTCAAAAGAAGAGTTTCGCTCACTTTTTACCTCAAAGTAGTGCTAAAGCA TTAGCTCTGGTGCCAACGGGTAGTCACTTGAGATTCTTCTTAGAGATGTGGTAAATTTGATGAAGTGAAAATATTTTATA TTTGCTGCAGAATTCACTTCTCTTCATTTGCAGGCACTGGACCTGATACGTGGCAAAAACTTTTTGATGCTGATGGATTC TGCCTTAGAGGGTCACTTTTCAAAAGATGATGGAACTGAGTTGGTTCGTTTGGCTTCGCGCTGCTTACAGTATGAAGGTC GTGAGAGGCCAAATGCAAAGTCCCTTGTTGCATCTCTTATGCCACTTCAGAAAGAAACAGAGGTATCAAAGCATTGATAT ACAATAACAGATCAATTAGACCTATTATCTATACACAAGCAATTACCAAAGCTTATCATGCATGGTAATGCTAAACATGT AATTTGGAATGAGTGCATGATCAACTTGATCCTTGAAAGATTCTGCCACTGGAAAGTTAGTCCCCGGAAGAAAGAAATAC ATTTGAAAGTCTCTGAATGTGTAAAACGTCAGTCAAGCTAGTCCATACGGTTTTGTCAACTAAAAGGTCAGTCAAGTTAG TCCCTACACATTCAGGGACTTTCGAATGCATTTCCTTCTTTCAGAGACTAACTTTCCAACGGAAAAATCGTTAAGTACCA AATTGACCATTCACTCAATTTGGAATAGGAAATGTTTACATATATTTAACTACTATAGTACTATACTTGTGTTGAAGAAA TGTGAGAAGTGTGATACCTATCTTAGGAAGACTAAAACTTCTCCTTTGAACAAGCAGGTCCCTTCATATGTTCTGATGGG TCTCCGGAATGAAACTGCATCCTCAACAAAGCCAGTATCATTGACACCTTTTGGTGAAGCATGTTTGAGACTGGATCTAA CTGCCATACATGAAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGGTTTGCCCATCTTCAACT TATACAAGAGGGTTTCATCTCACTTAAATACGATATAAAATAAAGGCAGTGACTATTTGCGCCTCCCCGTTTTACTAAGT CCGCCATCTCCTTTTTTAAAAATTCCAACATTGCCCTTAGTAAAAAAAACATAAAAAGGTAATATTTTATTTTTACTTCC CACACACCATCTCCTTCTTCCTCCTCACCCTCCTCCTCACCCTCCTCTTAATCCTCCACTCCCAACTTCTTTTGGGTGAT CTCAAGTCAAGAATAGAAGCTTACTCATGTAAGTTTTTACCTTTTTCCGAGCTTTCATCGCGATTTCGTGACTTCCCGAC GTAACTGGTTAGTCCCGCACTTAAACATGCGGTAGTGAAACAAATTACACGCTCCCGCTAACATAAGTGCGGAAGTGTGA AATTTATACCTTCCGCTAACTTGTTAGCGGAAGTGAAAAACTTAGTCATTTCAATCGTGTTAAGGTCTGGTACTGCTACC TGAATAAAATTGATTTTCCCGCACTTAAAAGTGCGGAACGTGATGTGTTGGAATAATAGTTCCGCAGTTAAACTGCGGAA GGCAAATTCAGAGAAAATTTAGAGAGAATTAAAAAAAATTGACCATCCACAGGCTAACCGCACTTAAATATGCGGTAGTC ATAAAACCTGTCCGCAGTTTAGAGTGCGGGCAAGTCACGAAACATCCTCCCATGGCAGAATCAAATCGAGGGACTGAATG AAAACACAAAATACAACCTCCCATGGTTAATGTGGGTTTGAGAGACTTGATTTTGTGAGGGTTGAAAATTTTGAAATTGG GTTGGAGAGGAAGAGGGGTTATACGGTTGAAAGAGGGGGGAGGGTTTGTAGGGAAAGATACGGTAGTTTTTTTTTTAATT TAAATTACTGAAGGGTATTTTGGTCTTTTTTCAGTTTTGGGGATGACGCACTTAGCAAAATAGGAGGCGCAAATAGTCAC TGCCTAAAATAAATTGGAACATGAACTCTATTTACACACTTTTCCCTCTAATTTTCAGTTACCTACTCCAATGTTGATCC TTCTTTATGATGAAATTGCAGCTTTCCTTTCAATTGTGGACAAGTCAAATGCAGGAAACCTTGAACTTGAAGAAGCATGG TGATACTGCATTTAGAGCTAAGGACTTTGCCACTGCCATTAAATGCTACACGCAAGTAAGAGGACTATTTCATAAATTGG ATGTTATGCATAATGTTAATGTTGCAAACTTGCAGTGACTGTGATGTTGCACACTATCTTGCTTAACATCTAAAAGGATC ATTTAACCAAATAGGACTACATTGAAAATGTAATAATACTTAAATGAAGAAGCTACTAAAAGTCTGCCAGTCTTCCCTAA AATTGGAATAAAACCACATTATGATTTCAATTTTCAACTTTCCAACAGCATAAATACTTTGTTCCATATCTCTGTGTCCT GTCCTGTGTCATGTATGTTCTTTCTAGCATATTATTGAAATGTAAAAGTTTTCCTTGTTGCAAATAGGAGTCAACTATAA ATATAAATATATCTCAAATTTTGTTTTTCAGTTCATAGATGGAGGGACTATGGTGTCACCTACAGTGTATGCAAGGCGCT GCTTATCTTATTTGATGAATGGTATGACACAGGAAGCTCTGGGGGATGCTATGCAAGCACAAGCTGTATCTCCTGAGTGG CCTACTGCTTTGTATCTTCAGGCAGCTTGTCTTTTCAGTCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGG GACTAACATGGAGGCCAAAAAGAACAAAAACTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0218900.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGGCTCGTTGCTCTAAATTCTCCTTCTGCTGGTTCCATTCCCACCTTAAACCTTCTGTCCTTGAATCCTCTGACCA AGAAAATGGTGGCAAGGGTGAAAAAATCTTGTGGCCTAGTTTTGCTGAGTTCAGCTTGGAGCAACTGAAGGCCGCCACAA ATGGTTTCTCCTCAGAAAACATAGTCTCTGAGCATGGTGAGAAAGCTCCAAACGTGGTTTACAAAGGGAAACTTGAGAAT GGACAGTGGATTGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCATCGAAGAAGCCACACAAGT GGGGAGCCTCAGAAGTGAACGTTTGGCCAATTTGGTTGGGGAGGCACAGCCTATGAAATGGGCAATGAGGTTGAGGGTAG CTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGATC TTGTTTGATCAGGATGGCAATCCTAGGTTGTCTTGCTTCGGGCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTAC TAACTTGGCTTTCACTCCTCCTGAGTACTTAAGAACTGGTAGAGTGACGCAAGAGAGTGTGGTTTACAGTTTCGGAACCC TGTTGCTAGACCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTGGACCTGATACGTGGCAAAAACTTTTTGATG CTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAAGATGATGGAACTGAGTTGGTTCGTTTGGCTTCGCGCTGCTTACA GTATGAAGGTCGTGAGAGGCCAAATGCAAAGTCCCTTGTCCCTTCATATGTTCTGATGGGTCTCCGGAATGAAACTGCAT CCTCAACAAAGCCAGTATCATTGACACCTTTTGGTGAAGCATGTTTGAGACTGGATCTAACTGCCATACATGAAATATTA GAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACAAGTCAAATGCAGGAAAC CTTGAACTTGAAGAAGCATGGTGATACTGCATTTAGAGCTAAGGACTTTGCCACTGCCATTAAATGCTACACGCAATTCA TAGATGGAGGGACTATGGTGTCACCTACAGTGTATGCAAGGCGCTGCTTATCTTATTTGATGAATGGTATGACACAGGAA GCTCTGGGGGATGCTATGCAAGCACAAGCTGTATCTCCTGAGTGGCCTACTGCTTTGTATCTTCAGGCAGCTTGTCTTTT CAGTCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGGACTAACATGGAGGCCAAAAAGAACAAAAACTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0218900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGARCSKFSFCWFHSHLKPSVLESSDQENGGKGEKILWPSFAEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLEN GQWIAIKRFNKFAWPDSRQFIEEATQVGSLRSERLANLVGEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRI LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTQESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM LMDSALEGHFSKDDGTELVRLASRCLQYEGRERPNAKSLVPSYVLMGLRNETASSTKPVSLTPFGEACLRLDLTAIHEIL EKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAIKCYTQFIDGGTMVSPTVYARRCLSYLMNGMTQE ALGDAMQAQAVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEAKKNKN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45863
1 120 120 6.4E-282 –
PANTHER
PTHR45863:SF6
1 120 120 6.4E-282 –
ProSiteProfiles
PS50011
1 286 286 13.885
IPR000719
Gene3D
G3DSA:3.30.200.20
33 120 88 3.9E-20 –
SUPERFAMILY
SSF56112
35 288 254 1.08E-32
IPR011009
Pfam
PF07714
100 280 181 4.0E-13
IPR001245
PANTHER
PTHR45863:SF6
121 452 332 6.4E-282 –
Gene3D
G3DSA:1.10.510.10
121 283 163 1.4E-23 –
PANTHER
PTHR45863
121 452 332 6.4E-282 –
Gene3D
G3DSA:1.25.40.10
340 452 113 7.8E-17
IPR011990
SUPERFAMILY
SSF48452
348 441 94 1.56E-14
IPR011990

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0218900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…