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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0221600 |
| Transcript ID | LotjaGi3g1v0221600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K3B3|G7K3B3_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0221600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:33491574..33501875) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAAACGAAAGTATTAATATTATCATTCGAAGCCGTTTCTTATTTTTTTCAATCTTCCATCTCCGCTGAAGTCTGAAG ACGTGCGCACGATGTCTGATTGCGCCGATCTATCGCCCAACAGCAACCAGTGAGACAGTAAGTCCTGATCTACCAACTCA TCAATCCGACCCCTCCATCTATGAATGAACCCACGACTTCTGGAGTTATAGATCAGGTTTCTATAGGCTTCCTCTCTCAT TGCTTTTTCTTTATCATTCCGTTCCGTTCCATTTTTTGTTCATTTAGTTCGATTGAGCTCCTTTTTCTCTGCTTCAATTT TACAGGTTTTTCCTCATTATAATTATAAATCACACAATTTCTTAATTGTTGTAAATTCGACTCTACATTGATATTGATCA ATTAAAGTTGGAAAACATTTTTCAGTTGCTTAATTTTGAGTTAGGCATGAGTTGAGACTTGAGAGTATGGTGAATAGACA AGCAATTTACATAAATATGATATGATTGATACATTTTGGTATGATTTCATAGTCATACTAATGGTGGAAGCTGATAATTT ATTTGATCTAACTCTTTTTTCATCTGATAATTGACTTACGGTTCTCTCATTTTTAGGTGTCGGTTACAGTCCTGAATTGC ACGTTAATTCTGCTTTTGGGGATTGTTATTCATGAAAGAAAGGATCTCATTTTTATTTTATTTTTCAGTCCTTCAGTTTC ACTAATGATTTCAGGATTCTGTGATAAAGATACTAGATACTTGGTACCATGATATACTTTATGCAAAGTTTTTTGTGCTT GAAACTATTGCAGAGTTCCTTACTTTGGTAACTGGTACTTTTTCAAATAACAAGAATAGTTATGTATATCAACTTTAAGT TTTCCTCTAAAATCCATCATCATGAATGGAACTTACATTCTTCAGTTGTACCTTAGTGGAAAAATACTGCTCTAATTTAG CATCGTACTCAATTATTTGTTTATTACTTGTAAACATAGGGAGTTAGTGTGCATTTGATTGAACTTTTCATTATTAATTT TTGTGTACCATTGTCTAGGTAAGTCTTTATGTCAGTTCTCCACATGTATGAGAGTTTTGGCTGGTGGAGACAGGCAGATT ACCTGAAAGTGCACGTTGCTGAGAGTTGGAATGAAATGCATCATTTGCTCATCATGGAAGTAAGATCTTTATCTACTTCT TTTTATTTAATAAAACATCTATGTTTCTGGCTAATCCTTCAAAAGATGTCATTCCAAGTATACCCTTGATTTTTGTTCTT GAAGGATCAGTAGATGAACATATTAGGACTAAGGGTTGAATTAGAAGACCTTTACTAAAAGTAGGGGAAAATAAGTATGA GAAAATAAATAGTAATGACTCTGAATGAGGAACAGAATAGTCTTCCCTTTTCAGGCACCATTTGGAAGCCTCTGAATTCC ATTTTTAGCTCTACTAGAAAAGACTTTAGATGCTTGTGGATAGATTTCTTCCTGATGATAGAAAGAGATGATTCAAGGTT TTGCCTGCTTTCTATTTAAATGTTGCGCTCTAAAAATGCAACATGAGAGCTTCTAATATAAATGTTTTACTTTGATGTGT AAAATAACATTTTCTGTCTCTCTCTATGTCTTTCAATATTCCATGAGATTGCCTGGTTTTGTTATTTCATTACTTAGTAT AAACTTATATTCCTCTGGTAATATGCTTGTAAAATTAGCAAGTGTCTGTCATCTTTAGTCACATGAATTCTATTGATGAT TCTATACCAACATAAGAAGCTGCATATGATTATGAGCTTGCCATCCGACAATTAGTAAAAACTCGTAGGGTGTCGGAGAT TGGGGGACTGTTTAATTGCAGATTTTGAAAACTATATTTAAAAACCATTTTTATAAACTTTCTCTAAAAACTGCTTTTTC ATTAGATGTTTTTCAACATTAAAAAAATTGTAATCTAAAAACTGAATCAAAAAGCATCTTTTAGTTGTTCTGAAATTGTG AACTGTTTCGCAAACAGTTTTTGAAAACAAACAGGATTTTAAATTTTTCAATTTTAAAAACAGAAAGCAGTTTTCGCAGT TTTTGAAAACTGTAATCAAATAGGCCCTAGGACTTCCCAAAAGTTTGATCTTATTATGCTTGGATTGGATCCATATGACC ATGCTGCCTCTCTATTTCCCAATCACTTAGCACATTAAGGGAATAGTAAAACACATGCCATAGTTTCACGTCCAATGTAG ACCTTTTGGTGAAAACAAGTTTTCTCTTGACAATAATCATTATTACATGAGAAATATTGCAATTAAAAATTTACAGTTGA ATGTTTTCTGTTCTTGTGGCTGATCTCTTTCCTTGAAATACTTGGAAGGAAATGCATTTTACTTGTGGATTCAATCATGG ATGGCTTCTCTATAATTACCGTGCAAAGCCCAGTTACCATAATTTGAGGAGGATGGTCATTATTTATTATCTCTTTGTAA AGTTGCAGTTCAAATGTTCAATATGTGCCTTTGGGGAAAAACAAAGCATCTCTTTAAAATGATCAATTACCATATTAAAT TTACATTATATTTATACAAATGTATTGCGCGGGCCGTAGTCTAGTTAATTTTATTGAAAAAATAATAATACACTCACACA CTTGGCTTTTGTCAGTGTCAAATTGCACGCTCAAAACAACACCACACTTATCTCAACTCCTCACCAAGAGCTCGCTGGAG CCTCTCTATTTTTCTTCACTCGAACTCTGTTTCTTTTCCTCACTACTCGTTGGTATGTATGTATTGAAACCATGATACAA ACTTCCAATTTATACTAGCTAAGGTCGGTTGGATCTGCACAAGATACGGCTAATATATATCATCAAGAAACAACTAGATA ACTTAACCGTGTATAGCTAGTTGCTTTTCAAAAAAAAACCGTGTATAGCTAGTCAAACTTGATCGTGAATAAAATGATGC GAGAAAATCAGACAATCAATGTGAACACTTTGATCGGCTAGGCTGTGTGATCATATCATATATGACAATCCAAGAAACTT CCAGCTGCTAATTGATTCCTATTTAATGGTATACATCTACGTTCAAAAAAAATTGTATATATCCATACTTAATTGGTTTC TCTTCTCAGCATATATCGTTTTGCTTATTCTGCAGTTCTAGTTTCCTGATCAAAGCAAGCTAGGGTCCGAGCGTACTCGC ATGGCAGAAGAGTTGAAGAGTTTGAATTACGATGTTTTCCTCAGTTTTAGGGGTGAGGATACAAGGCATACATTAATAAA AGATCTTCGCGAAAAGCTGAAGCGGAAGGGCATCAGAGTTTTCATTGATGATGATATGCTGAAGCTAGGGGATGTTATTT CACCATCTCTTTACGGAGCCATTGAAGAATCCACAGTTTTAGTCGTCGTGCTTTCTGAGAATTATGCATCTTCCACATGG TGCCTAAAAGAGCTTGTCAAAATCATGCAATGTTTAAAGGAAGGAAATCGTCGTCAACAATTTGTTTTCCCCATTTTTTA CTATGTTGATCCTTCCCATGTACAACATCAGACAGAGAAATACGGTGAAGCAATGGTTGCACATGAGAATAGACTTGGCA AGAACTCTGACCAAGTTCGACAATGGAGATCAGCTTTGAGGGAAGTATCTCAATTAGCAGGGCTCCATATCAGTACCGGG TAAGTTTCAATAATTTCATTTTTTTAATTATTTTAGGTAATAAAATTAGATTTTAATTACTATGTTGAAAGTTCTCCAAT CAGAATTCATCAATCTGTGATATATAACATAATTAAATTTAAATTTAAAAATATTTAAAATACAAAATGGATGATAAATT AAATTAATCCTTAAAATTATCGGAGTAGTTTTTTCTCATCAAGTATGATAATAATCATAATATATATACATTGTATTGGT TATTCGAGTGTTGATGATCACAATCCTGCTATTAACCAAATAATGTATTGTATTCCAATAGGAACGAAATCAACATTGTT GAAGAGATTGTTAAGAAGGTAAAGATAATTTCTAAACCTTTTCATGGTAAGGACCCAGTTGGATTTGAGCAACGCATAGA AGAGGTAAATTCACTTCTAGAAATGAATCTTGATGATGATGATGATGATGATAATACTTCTGTATGCATGTTGGGTATAT ACGGACTTAAAGGAATTGGGAAAACTGAATTTGCAAAAGCGTTATATAGCAAGATTAGGCACAAATTTGAAGCTGAAAGT TTTATTGCCAATGTTGGAGAGAAGTCAAAGCAAGCCAATGGCATGGAAGAGCTACAAAAGACGCTTATGTCAAACATGGG GGAAAAGTCAGAAACTGAGTTGGATAGTAAAAGTAGAAGAATTGAAATACAAAGCAGGCTTGGCAAGAAAAAAATTCTTT TGGTTCTTGATGATGTCGACCACATAGAACAGTTGAATAACTTGGCAGGTGGGTATGATTGGTTTGGTTCAGGTAGCAGG ATCATTATAACAACAAGGGATGAAGATATGCTACATCATCATGGAGTTAAAAAAACTTACAAGATGGCGGAACTAGATGA TCAACCATCTCTTGAGTTGTTCTGTCAAAATGCTTTTGGAAAGAGCCATCCCAAAACAGGTTATGGATATTTATCTCATC GTGCAGTAAATTATGCCAAGGGTCTTCCATTAGCTTTAAAAGCTTTAGGCTCTCATTTGGCCACCGAAGATGATTTAGAA TATTGGGAGTGTACATTAGAAGAATACAAGACAAATCCAAATCTGGTTTTTTTTCCCATATAGTGCACATTTCAAATTAA TTACAGACATGGAGTAACTTTTATTTTATTTATCAACTTATATCACCACTAGCATCAATGATATTTATTTTAGAAATTGA CAGCACAATTGGCAATACAAGTTTTTTAAGGTGGCTTTCTAGGGTGAATGACTTCAATGGGTCTTTCACCCATGAAAGAT CTAAATTACCTGCTATAGCAGGTTATCTTAACCTGTTGAGAGAAAAATGAAAAAAATGAAAATGCAGTGTTACAAAAATG TCCTCTTCTCTCCGCTCTTTCCTCTCACCCTCCTCTCCCTCACCCCTGTGACCTAGCACCTCCCTTCTCCCTCACATGTC TCCCCCACTCACCACTCCCATTTCTCTTTCTCCCATGTGTGATTCGGCTCTCTCCAACCCCTACCAAATCATCAGTGAGT GCCCCAAATCATTTTGAACCTCAACCAAATCATGGTAGAAACACTTCCACGACCTTGTTACGGAGTTCTGGGTAGCTAAA GATGATGTGTTGCATTTTCCAGATTTCGACGACCTCCGCCTTTTACAATCCAGCTTTACGGTCAGATTCGACGTCATCTC GGTGTGAGAATACTACAATCTTGACCATCGTCGCGAGCACTTCTAGATCCACCGATTCAACTCTGGTGAGAATGATAGGA AAGCTAATTCCTATCAAGGAAGAAAAGTTAAAGAACGCTAAAAGCTAAAGCTAAGATAATAAAAGAGAAAGATAAAATGC TTCATTTTCTTGTTAATTCCATTATGGAAAGGAAATACAAACTTATACTATCAGCCTAACATAAGATGAGCCTAGAATTA GTGGGCCTAACAAGTCGCCTATTCATAAGAAAGTAGACATTCTAGACTTGAAAAAAAAAGGAGCAAATTAATATAATTCT AGACTTCAGTGTAACATCCCGACTTCAGGGTGTCAATTTGTAAACCAAAAATAAAATAAAGCGGAAAATGTAGGTAATTT TTTTCGTTTTCTTTTCCTTTTTAAAGATAAGACTTTTCACAACATGCAATGCATAAACTTGACATAATAATTACAACCCC CAAGTACCTGAAGTATAAGCCCGAAGGCGAGGTTTACAAGTTTTCAGAAAGCATAATTAGTTCCAAATATATTACATGTG ACAGAAGGGAATAGTCAGCCCAAAATGACCTCTTCTAGACCTCTACGTCCGACTACTCCATGTGATTCCCAACTATGGAG AACCACACTAAAAAGTAATGTGTCAGGAACCTACCCTGCCCAAAAATACAGACATTGCCGGTCAAAAAGTCAAACGCCTA ATAACAGTAGGCTCTAGCTACCCATACCCTAATCCAAACGCAAAAACCCTCATCCTCTTCACTCATGGAGTCCGGGTCCT CATCAGAAGGCTCAGAAGTAATCATTTTGCTCTGGATCCTCCTCGAATGGTGAATCATCACGAACCCGTTGTTGACTATC TGGCAGTTTGCCGACCGCCCAACACAAACAGACAAACAAGGCAAGTGAGAGGATCAACTCACAGTATACAGTATAATACA AACATCATGTGAAAGATAAGGGGTGTATATATACATATATATATATATATATAGGTTTTGCATGGACTATCCTAGTGTAT ATACATAGTATATTATCATTTCGCAACTAACAAATATATCGTCATCACATCATCAAATATGGTAAGATGCATGGCGTGTT AATGCAATGTCATGCTCAAAAGATTATTCGGATGAAAGTTTTACGTCTGGCGATGAATAACAGGTGTAGCAACTCGGGCA AACTACATATCGACACCTTAGAATCGGTTCAAACCACCTATCGACCGTTCTGCTTGCATGTGCCGGAAACACTATTGTGT TTCCCATAACACTATTGCGTTTTGAAGGTTCATGCCTGATCAAATATCAAGACCTAGGTGAGACCCGTTCGAACCCCCTA TCGACCGTTCCACCCTGGAATAAATGTATGCATGAATGCATCAAAGTTAGTCAGACAACGGATCGACCACCTATGATACG TCTCTATCGACAGTCTCAGTTTCTAATCGTGCCCTAAGGCAATATGAATTCAGGTTACTTCTATGAGTAACGAATGTCAT TCGCACTTTTGTGACTCAACTTGTCACTACGGTCCATACCACCTAATGTTCGTACTTAGCAACAAGAAGCGTCTTATGCG CCAACAAGTTTTCTAACCTCCATTGGAACAAAGTCCACCCACAATCATAGCTCGCTAGTCACTTAACCCCTTTTTAAGTC TACTAGGCGATAAACCCTCAACCCAAATCCATTGTACTATTAGTACGTGTCTAACTAGAGTACATTGTCTCTACAATACC CTAAGGTAAATGTCGAATCGTCGAAAAAGGCTTCAACAAGGAAGAGTGCTAATCGCACTTAGGGACCATCTCACTCACAT TGGCTCATCCTTTAGATGGCCCAAAGAATTGCTCATAGAGCGAAAGAGGTGCTATCACCCTCAAGTTTTTCGTTATACTT AGATCGTTGATCCTTACCATTTTCCAAACTCATTTTCAGATCCTAAGTCTTTCCCAAGAAATTGTCATTACTATTTGAAG GTGTTCTATCTTTGGTTCGAAAGCTCTATAAGTCAAAAGATCTCAATAACTCCTAAGAAATTCCCCGAGAAGGTCTTGAT CCTATACATGGCAATGGCTCAGACCTCTGGTCAGGCCTGCCTAACATCCCCTCAGAATCCCGTCATTAGCATGGCATAAC TTAATGTTTCCCCATACTCCGAAAGTCACATGAACATACATAAGTTTAGTGAGCACAGTCCAACAAATCAACATAAACAC AAATACATCAAGCTCTATTGAGCGATGAAACAATAATTCAGTGCTGTAAAACATAACCCTATCCTAAGGCTAGAAAGTCG TAGGACAAAAACCACAGTAAACGGCCGAAGCCTCACAGTCAATATTAGCATAATCCTCGTCAATCAATAATGGCATAAGC CTCAATCATTCATAGTCAATATAAGTCGAATTCTCGGAACCTAAAGCATTAGCTAGTAGAGTAAGTTTCCCTCACCTCTT GGGTGTTCTCCTCTATCCTGCAGATTCACATCTTGCTCCAAATCAACTCCCCTTAGTTCTGCTCGATCCAACCCTTAAGA AAAATAGCATTGCTTAGTCACTAAGAAACAATACAATTTAATAACACTAATCAAAACCGGGAGAAGCTTTTGAAGCTTCA GAGTTCAACCTTTAGGCATGAATGGAAGAGTTTCCCCAAATGTGTGAGTTTTGACTCGATTCAGGTTTTGTACAAAACAG GTTGTTCAACGAACTTCAAACTGTGCAACCACTTGGGTGAATTTTTGACACATGAAACCAACCCAGAAAATTCTAATATT TTTACTACATGATTTAAAACAAGCCTCTTAAACTGTAGTGAAATTTCGAGTTCAAAGTCCAAGTAAAGAATTCATAACAA ATCATACAAGGACTGAAGGTCACACACATGGGCAGCAGGACCTTTGCTCGCTAAAATGCTGCGAAGCCTCTACAGCACGA TTCTCCGCAGCATTTTCCAACTCCCTCTGGAAGAGCTCCTGCATTTCCTCCACAAACTCCAAGAAGACTCGGAGTGTGGT GTCCAGCTCTGGACTCAGATTCAATCACAACAACTGGACAATCAGTTGCTGGATGCTGGGATTCTCTGGATGCCTCACGT TGAAGAAGAGATCTTCCTCAAAGGCTATTTTCCTAAGCTCTCTCATGCAAATCTCAAAGGAATCCATTGAAGTGTTTGTT ACTAAAAGCAGATGAACTGTGAAGACTGTTATGGAATCACTGTTATTTATACTCAAAGTTCAGTCTCCAGAAGTTATTGC TGAAACAGTTTTTCGAGGTGTTTCTCTAAAAACTGATGCAAGTCTTAAAGTCTTTTGACCGGTGGTAAACGTATTTTTCC TTCTTGGCCAGTGTTCTTCACCTAATTTAATTTTCTTCATATGCATTCATTATTTTCATAATTATCCTTATAATCTATTT ATTTTTATCCTCTTTAACTTAGTTCTTCTCTAAGGGGGAGTACCTTGTACTTCAAGCTAAGTTTTTCACACTCTCAGCTC TTTTTGCTTATGACAAAAAGGGGGAGTACACCCAGTTTTTTATGTGTATATTGTGTTAGTGTGATCTATTTTTCTTCTGG AGAATATTAAGTGATCAATCGCTATGACTATAGATCTTTCATGAGGCACCAGCAAGGAAACATTTTCACTTCTTCTGAAG TGATTGTATGCTCTGATAGTGTGACTCTGATATCACCCCTTGATTACCTCTGATTATTCATGTGCTCTGATATTCTTATA AAATCTATGTCATGTATGAATCTGATTGATTTATCACTCTGATCACTATTATTATTTAGCTCAGAATCAAGACGCTACTA ATGTTTTTATTAAGTCTTAGATTCAGGGGGAGCTAAGCTCAGAATCAGGCTGTGACTTGGATTCAGAACGAGCAAAATAA ACCATACATCTCAGGATAAGTTCACCTATGATATCCTAAAACTCTAAGTGTATTCAGTTTATTGTTTAAGAATTGTTCAT CAAAATACTTGGTTTTGTCATCATCAAAAAGGGGGAGATTGTAAGACCAAGATTTGGTCGTGTAGTACAACTCTATGTTT TGATGATTACACGTTAATTATTGTATATGAACAATTATGGTACTCTAACGTTGCTCTCTAAGTGTTTAATTGACAGGCAC TGACTCTGGTCTAAATACACACTTATCAGAAGCACAAAGCAAAAGAGTAGCCAACACAATGCTTTCGCTCTCACTATGTT ATGTTTGAACAGTAGTATATGCTTCAGAAGTTCTGAAGATCATAAGCTCTGATGTGGATTCAGACCACTTCAAGTTCTGA AGACCAGAAGCTCTGAAGGTCCAGAAGTTAAGAAGTGAAGACTGTGAAGTCCAAGAGTAAGCTGGCTCTTAAGACCAAGT ACTTCCAATTCTGATGACTAGAAGTTCTGATGAACAGTACAGAAGCAGAAGCTATGAAGGTCAGATGATCCAAGCTTCCC TTTGACTCTGATCTCATAAGCTGCACGCGTCCCAACATGAAGCGTCGCCAAATCAGAAGTCAACTAGGATAAGGCTCGCG TCGCTATCCAAGTACAAAAGCAATTGTACTATTCTGACGGCCTTACCTAAGATGTTCAGCCATAGCAGAATCTATCTGGA AGTTCCGGATTTGTCCTCCAACGGTAGCATTCCATGCAACGGATACAACCCTAATCATTGGAGTATAAATAGAGGCTGAA GTTGGAAGAAAGTAGCTAAGAAACTTTGTACAAAACTCAAGCAAATATTCAACCGATCAATTAGCAATCTTTCTTCATTC GTTCTTATTGTGTTTACCTTAGCTTTCTTAGAAGCACTTCATTGTAAACCAAAACCTTCCAAACAGCAAGTTTGTATTTC CTTAAGGGACCAAGTTTGGTCAGATCCTTGAGAAGACTAAGAGAGTGAATCTTAGTGTTTGC
CDS sequence (LotjaGi3g1v0221600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAGAGTTGAAGAGTTTGAATTACGATGTTTTCCTCAGTTTTAGGGGTGAGGATACAAGGCATACATTAATAAA AGATCTTCGCGAAAAGCTGAAGCGGAAGGGCATCAGAGTTTTCATTGATGATGATATGCTGAAGCTAGGGGATGTTATTT CACCATCTCTTTACGGAGCCATTGAAGAATCCACAGTTTTAGTCGTCGTGCTTTCTGAGAATTATGCATCTTCCACATGG TGCCTAAAAGAGCTTGTCAAAATCATGCAATGTTTAAAGGAAGGAAATCGTCGTCAACAATTTGTTTTCCCCATTTTTTA CTATGTTGATCCTTCCCATGTACAACATCAGACAGAGAAATACGGTGAAGCAATGGTTGCACATGAGAATAGACTTGGCA AGAACTCTGACCAAGTTCGACAATGGAGATCAGCTTTGAGGGAAGTATCTCAATTAGCAGGGCTCCATATCAGTACCGGG AACGAAATCAACATTGTTGAAGAGATTGTTAAGAAGGTAAAGATAATTTCTAAACCTTTTCATGGTAAGGACCCAGTTGG ATTTGAGCAACGCATAGAAGAGGTAAATTCACTTCTAGAAATGAATCTTGATGATGATGATGATGATGATAATACTTCTG TATGCATGTTGGGTATATACGGACTTAAAGGAATTGGGAAAACTGAATTTGCAAAAGCGTTATATAGCAAGATTAGGCAC AAATTTGAAGCTGAAAGTTTTATTGCCAATGTTGGAGAGAAGTCAAAGCAAGCCAATGGCATGGAAGAGCTACAAAAGAC GCTTATGTCAAACATGGGGGAAAAGTCAGAAACTGAGTTGGATAGTAAAAGTAGAAGAATTGAAATACAAAGCAGGCTTG GCAAGAAAAAAATTCTTTTGGTTCTTGATGATGTCGACCACATAGAACAGTTGAATAACTTGGCAGGTGGGTATGATTGG TTTGGTTCAGGTAGCAGGATCATTATAACAACAAGGGATGAAGATATGCTACATCATCATGGAGTTAAAAAAACTTACAA GATGGCGGAACTAGATGATCAACCATCTCTTGAGTTGTTCTGTCAAAATGCTTTTGGAAAGAGCCATCCCAAAACAGGTT ATGGATATTTATCTCATCGTGCAGTAAATTATGCCAAGGGTCTTCCATTAGCTTTAAAAGCTTTAGGCTCTCATTTGGCC ACCGAAGATGATTTAGAATATTGGGAGTGTACATTAGAAGAATACAAGACAAATCCAAATCTGGTTTTTTTTCCCATATA G
Protein sequence (LotjaGi3g1v0221600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEELKSLNYDVFLSFRGEDTRHTLIKDLREKLKRKGIRVFIDDDMLKLGDVISPSLYGAIEESTVLVVVLSENYASSTW CLKELVKIMQCLKEGNRRQQFVFPIFYYVDPSHVQHQTEKYGEAMVAHENRLGKNSDQVRQWRSALREVSQLAGLHISTG NEINIVEEIVKKVKIISKPFHGKDPVGFEQRIEEVNSLLEMNLDDDDDDDNTSVCMLGIYGLKGIGKTEFAKALYSKIRH KFEAESFIANVGEKSKQANGMEELQKTLMSNMGEKSETELDSKSRRIEIQSRLGKKKILLVLDDVDHIEQLNNLAGGYDW FGSGSRIIITTRDEDMLHHHGVKKTYKMAELDDQPSLELFCQNAFGKSHPKTGYGYLSHRAVNYAKGLPLALKALGSHLA TEDDLEYWECTLEEYKTNPNLVFFPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 174 | 170 | 2.0E-61 | ||
| PANTHER | 6 | 420 | 415 | 4.2E-180 | – | |
| PANTHER | 6 | 420 | 415 | 4.2E-180 | – | |
| SUPERFAMILY | 7 | 154 | 148 | 4.71E-39 | ||
| ProSiteProfiles | 8 | 152 | 145 | 28.251 | ||
| SMART | 9 | 152 | 144 | 2.7E-43 | ||
| Pfam | 9 | 176 | 168 | 1.6E-40 | ||
| SUPERFAMILY | 169 | 419 | 251 | 2.75E-47 | ||
| Gene3D | 175 | 348 | 174 | 3.1E-29 | – | |
| Pfam | 210 | 414 | 205 | 3.0E-27 | ||
| PRINTS | 216 | 231 | 16 | 4.8E-17 | – | |
| PRINTS | 292 | 306 | 15 | 4.8E-17 | – | |
| PRINTS | 385 | 399 | 15 | 4.8E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0221600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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