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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0222000 |
| Transcript ID | LotjaGi3g1v0222000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151SMC0|A0A151SMC0_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi3g1v0222000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:33561844..33566320) extracted from Lotus japonicus Gifu genome v1.2.
GCAAAAACCAAGTAACGCTGAGGAGAGCGTGCTGAAAAATGAAGACAAGAATGAGTTTTTGTTTTTCTCTCGTGTCTCTC CGAATATCACATGCTTTGAGCAATCTTCAGTAATCATAAGTCTCTTGTCTTCTCCTCATCCTTCTAATATAAGCAATGAG AGGTAGTTTACAAAATGGTCCACCACTCTTTCTATCTACCCTTCACTATTAAACAACCAATGGAAGGTGCTTACACCCAA CAAAGAGAAAGAGCATAAACTCAACAACAACAACTTCAACAACTGAAGCAATGTACCTATTAGTTACCTTATAGTGTCCA TTAATCAGAATCCACTTTGCACTTTGAGATTCTGGGTGTCTCTTGTCTCAACCTTTTCAAAGTTTGCATTAGAGTTCAAC TTTCAGTACAATGACATTGTAATTGTCAAGCAACCACTTATCCCAATTATATTCCAACAATAATAAGCAGTTCTGTTTTC TTTCTGCTTTTGGAGCCTGGTTTTCTTGAAGGAAGGAAAATCTGCAATGGAGGTTGTGGGTATGATTGAGAAGAATGAAG TTACTGAAGAAAATAAAGAATGTGAAAGTGGTTGTCATGATGATAATTTTTCTGAGCTGGTTGAAGAAAAGAGTCTGAGT AGTAGTGAGGACTCATCTTCACCATCTTCAATGGGATGGCCGGTTCAAGAAGTTTCTGCATCTAATTCTAGCAGTCATAG TAGTGCTGAGAAATTGAGTAATGAGAATATTGAGAAACAAGTCTCAGTATTACCAGGTCCAGGTATCAAATTCAATGCTT GTGTAGATAATTGATTTCTAGTTTTTACAAGCAAGTGCTCTAGTTGCACAATATTAGCATTATGTGTTCTCTAATTTGAT TTTGATTTTGATTCTCAGTGCTAGAGATTGAGATGATGAAGGAGAGGTTTGCAAAATTGCTACTTGGAGAAGACATGTCA GGTTGCGGAAAGGGGGTAACTACAGCCTTGGCTATATCCAATGCCATAACTAATCTATGTGGTATGTGTAGGTGTTATCA GTAAAACAGGTCAATGAGTCTGTTACTAATTTTCAAATTCAAATTTATTTTATGTGAAGTTTGGCTGTGATGAATTTCAA TTACTGTAATTCCTGCTTTTGAATCTGAGGTTCTGATTCTGATTGTTACCTGCACATTTCCTGAATCTGCAGCCACTCTG TTTGGGCAACTTTGGAGATTGGAACCTCTGGCACCAAAGAAGAAAGCAATGTGGCAAAGAGAAATGGAGTGGCTTCTTTG TGTCAGTGATCATATTGTTGAGTTGAAACCTACATGGCAAACATTTCCGGATGGAAGAAAGGTTGAGGTACAACTTCAGA GATTACTTTAATGTGGAGACTTATTCTTTTTGGACTCTAATTTGAAGTTGAAAGCTTTCTAGTAATTTATGCTAGATTAT ATGTTTATTTTGAAAATTAAAGCATATAGCTTACAATGCAAATTGATGTGATTTAGCTGAGTAAGGTACTTGATCATGTT TAGTTGTAAGATCAGTAAATCCACCCATCAATGTAGTACTCTCAAGGTCTTTCTTTCTCTCTTTCTCTCAGTTGAACAGG ATAGGTTTGGTTGTTTTGTTTTTGGTGACAAAGCCCGTTTGGATGCACATCAAAGAACACGCTTTGGAGGCTGAGCTTAT CTACTGAGAAAGTACTAGACAAAAATATTACTAGATGAGCTTAAATAAGTTCTCTCTAGTCTGCATCCAAACGAGATCTT ACTATTGTTGTTTTTTTAACGTATTTCACAATGTGAATGACAATATACGCTTATTCAGTGAGGCAGGAGAAAAGATCCAA TATCCATGCTTCCTTCATTTTTGTTTGATTAGCCTTTCTAGCTAATAGGTAACATATAGATAGTTGTTTGGTGTTTAACA TTGTTTATTCTCAAATGTAAAACAGGTCATGACTTGCAGACCCCGCTCAGATCTTTATGTCAATCTCCCAGCTTTGAGAA AATTAGATAACATGCTTCTTGTAAGATTTTACTTAATATATACCATGCATATTCAACAAGTTTTATGAAGTAGTACTCTA AAGATTTTCTCTTTCAACAGGAAGTACTAGATAGTTTTGTCAACACCGAGTTCAGGTATGTGGATCAAGGTATTCTAGCC CCAGATGGAGATGGTTCATCTTCTTTTCGGAGAGCTCTTCAACGACAAGAGGATAAATGGTGGCTTCCTGTACCTCAAGT TCCTCCTTGTGGTCTCCATGAAAATTCAAGAAGGCAGTTGCAGCACAAGAGGGACTGCACAAACCAAGTATTGAAAGCTG CAATGGCCATGAACAGCATTACTTTATCTGAAATGGAGGTTCCTGATACTTATTTGGAGTCTCTTCCAAAGGTTCCCTAT TATTTCAAATGTTAATGTATTTTAATTATTTTTCCTTTTTTCTTATGTTGGTTCATTCCTTTTTCTGTTTCTTTCCCTTA GAACTATATATAACCACTCATGCTTGAACCGTAGATTATTATTTTGGGTCGAAAATGACCACATAATCCAAAATCATCAA GGTCGGCCCAAACAACCAGGCCCAATTCTAAGCTCAAGTCAGGTCAAGATCAAATAGAGAGTCTCTAATTAAGTCAAGGA AGAGTGATTTGTGGTTTGTATAGCTTACAATGCAAGCAAACCTATATACTTAGCCTTCTCGTTTTGTTCAATTGTATCGG TAGTTAACTGTTTGCCATCTGTCAGCAAAGTGGCATAACAGTTTTAACCCTGATTGAGTTAGTTTGACCATGATTTTAAG AACTTGGGCTAAGCTTTCCTTAGTCCGACGATGACTTGTCGCAGAATTGAGGCTGGTTGTTTGGGCTAGCCTTGATGGCT TTTAGTCCATGTGATCAGTCACTGGCTTAGAACAGTAGCCTCAGCCCAACATGTAATGTAAATGAAATGTCGAGATAAAC AACGAAAATGCTGAGTTAAGCCATCAAGGCCAGCCCAATCAACTTTTTTTTTTGGTTTCAATACAAGATTATGAAATGAC ATAATGGTCAAATTGCTGATACAACCCTACTTTCAGACCGCAAGAGCCAGCTTGGGGGATGTCATTTATCGATATATTAC ATCAGATAATTTTTCTCCTGAATGTCTGTTGGCTCACCTTGATATATCCACTGAACACCAAGCCATAGAGATTGCAAACA GAGTAGAGGCTTCCATTTACATTTGGCATAAAAAGACTAACTCAAAGCCTGCAAGTCGCGCCACAAGATCAAGTTCAAGA TCATCGTGGGAAATGTTCAGGGATCTGATTGTTGAGGGAGAGAAAAGTGAAATGCTTGTAGAGAGAGCAGAAAGCCTTCT TCTGTCCTTGATGCAGCGATTCCCGGGTCTGCCTCAAACCGCCTTGGACATGAGCAAAATCCAATGCAACAAGGTTTGTG TTTACCATGTTCCATCTTAAATCCTTTCTTTTTTACCTCTTGAATATTGTAAAGTTTAGAATTAGAACTTCAGCGCAACG GTTAAAAGTTGCTGCCATGTGACCGAGTCTCTTGTGTAAAAACAAGGTAAGGTTACGTACATTATTATGTGGTTGGACCT TTCCCTGGACCCACACATAACGGGAGCTTTAATGTACCAGACAGCCCTTTATTATTATGAAGTTTGATCTCAGTGCTTCA CATTGTTCTGTTGTGTAGGATGTAGGGAAATCCATTCTAGAGAGTTACTCAAGAGTACTGGAGAGTTTGGCTTCTAATAT TGTTGCGCGCATTGATGATGTGCTCTATGTAGATGATTTAACCAAGCATTCTGATCAATTCTCATCTCTACCAAAAGTTG CTGTAATTACTCAAAAGAGCATTTCATCAGCTCCATACTCAATGCCTGTCCAAAGCACTTCGTATAAACCAGCTTTCGGG ACACCATGTTTTTCTCCTGCAAAGGGTAAAAGATCACCAATTAATTTTCACAGCACTGATGAAGAGGCAGCATTTGAAAT AGACATAGAGTCCAGTGACTGCACAGATGTTAAACTCAATGTTCTGGACCGGGCATGGCTAGAATCTCAAAGCTGAAACA TCTATTCACTGGGAGTTGTCTTTGTTTGTATAATGTATATGAAATATGTAGAAGGATGGGCATATTTAGAGTGGATAATT TGGAATGAGGTGCCTCTAGTTGGGGTGTTTTATGTTCTAATTACCACTTCAATCAATGTGAATGATATAGAAAAATAAAA TTGAAAATATTTCAAAATCTTTCAAGAAAGTAATTCGTCTGAAATCCAGACAGTATGTGTCTTATCTCAAGAGCTAGCTA GTTTTAAGATTGAGTAATTACAACTGCTATCAGCTAATAGTTACTGCTACAACTGTTCTGTTAGCAGTCAGATGAATTGG TTAGAGCCTTAGAGGTGAGTACCTTACTTAGCTTAGAAGCTCAGCCTCATGCTCCCACAAATAAAGGATTGTACCGG
CDS sequence (LotjaGi3g1v0222000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTGTGGGTATGATTGAGAAGAATGAAGTTACTGAAGAAAATAAAGAATGTGAAAGTGGTTGTCATGATGATAA TTTTTCTGAGCTGGTTGAAGAAAAGAGTCTGAGTAGTAGTGAGGACTCATCTTCACCATCTTCAATGGGATGGCCGGTTC AAGAAGTTTCTGCATCTAATTCTAGCAGTCATAGTAGTGCTGAGAAATTGAGTAATGAGAATATTGAGAAACAAGTCTCA GTATTACCAGGTCCAGTGCTAGAGATTGAGATGATGAAGGAGAGGTTTGCAAAATTGCTACTTGGAGAAGACATGTCAGG TTGCGGAAAGGGGGTAACTACAGCCTTGGCTATATCCAATGCCATAACTAATCTATGTGCCACTCTGTTTGGGCAACTTT GGAGATTGGAACCTCTGGCACCAAAGAAGAAAGCAATGTGGCAAAGAGAAATGGAGTGGCTTCTTTGTGTCAGTGATCAT ATTGTTGAGTTGAAACCTACATGGCAAACATTTCCGGATGGAAGAAAGGTTGAGGTCATGACTTGCAGACCCCGCTCAGA TCTTTATGTCAATCTCCCAGCTTTGAGAAAATTAGATAACATGCTTCTTGAAGTACTAGATAGTTTTGTCAACACCGAGT TCAGGTATGTGGATCAAGGTATTCTAGCCCCAGATGGAGATGGTTCATCTTCTTTTCGGAGAGCTCTTCAACGACAAGAG GATAAATGGTGGCTTCCTGTACCTCAAGTTCCTCCTTGTGGTCTCCATGAAAATTCAAGAAGGCAGTTGCAGCACAAGAG GGACTGCACAAACCAAGTATTGAAAGCTGCAATGGCCATGAACAGCATTACTTTATCTGAAATGGAGGTTCCTGATACTT ATTTGGAGTCTCTTCCAAAGACCGCAAGAGCCAGCTTGGGGGATGTCATTTATCGATATATTACATCAGATAATTTTTCT CCTGAATGTCTGTTGGCTCACCTTGATATATCCACTGAACACCAAGCCATAGAGATTGCAAACAGAGTAGAGGCTTCCAT TTACATTTGGCATAAAAAGACTAACTCAAAGCCTGCAAGTCGCGCCACAAGATCAAGTTCAAGATCATCGTGGGAAATGT TCAGGGATCTGATTGTTGAGGGAGAGAAAAGTGAAATGCTTGTAGAGAGAGCAGAAAGCCTTCTTCTGTCCTTGATGCAG CGATTCCCGGGTCTGCCTCAAACCGCCTTGGACATGAGCAAAATCCAATGCAACAAGGATGTAGGGAAATCCATTCTAGA GAGTTACTCAAGAGTACTGGAGAGTTTGGCTTCTAATATTGTTGCGCGCATTGATGATGTGCTCTATGTAGATGATTTAA CCAAGCATTCTGATCAATTCTCATCTCTACCAAAAGTTGCTGTAATTACTCAAAAGAGCATTTCATCAGCTCCATACTCA ATGCCTGTCCAAAGCACTTCGTATAAACCAGCTTTCGGGACACCATGTTTTTCTCCTGCAAAGGGTAAAAGATCACCAAT TAATTTTCACAGCACTGATGAAGAGGCAGCATTTGAAATAGACATAGAGTCCAGTGACTGCACAGATGTTAAACTCAATG TTCTGGACCGGGCATGGCTAGAATCTCAAAGCTGA
Protein sequence (LotjaGi3g1v0222000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVVGMIEKNEVTEENKECESGCHDDNFSELVEEKSLSSSEDSSSPSSMGWPVQEVSASNSSSHSSAEKLSNENIEKQVS VLPGPVLEIEMMKERFAKLLLGEDMSGCGKGVTTALAISNAITNLCATLFGQLWRLEPLAPKKKAMWQREMEWLLCVSDH IVELKPTWQTFPDGRKVEVMTCRPRSDLYVNLPALRKLDNMLLEVLDSFVNTEFRYVDQGILAPDGDGSSSFRRALQRQE DKWWLPVPQVPPCGLHENSRRQLQHKRDCTNQVLKAAMAMNSITLSEMEVPDTYLESLPKTARASLGDVIYRYITSDNFS PECLLAHLDISTEHQAIEIANRVEASIYIWHKKTNSKPASRATRSSSRSSWEMFRDLIVEGEKSEMLVERAESLLLSLMQ RFPGLPQTALDMSKIQCNKDVGKSILESYSRVLESLASNIVARIDDVLYVDDLTKHSDQFSSLPKVAVITQKSISSAPYS MPVQSTSYKPAFGTPCFSPAKGKRSPINFHSTDEEAAFEIDIESSDCTDVKLNVLDRAWLESQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 72 | 72 | - | – | |
| MobiDBLite | 7 | 37 | 31 | - | – | |
| PANTHER | 29 | 505 | 477 | 1.2E-287 | – | |
| PANTHER | 29 | 505 | 477 | 1.2E-287 | ||
| MobiDBLite | 38 | 72 | 35 | - | – | |
| ProSiteProfiles | 79 | 461 | 383 | 116.852 | ||
| Gene3D | 84 | 322 | 239 | 2.0E-108 | – | |
| Pfam | 88 | 455 | 368 | 1.0E-181 | ||
| Gene3D | 383 | 461 | 79 | 2.7E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Rho guanyl-nucleotide exchange factor activity | Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. |
Expression pattern of LotjaGi3g1v0222000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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