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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038937
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.516s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0084000.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G05940.1 ROP guanine nucleotide exchange factor 5; Swiss-Prot: sp|F4K295|ROGF5_ARATH Rop guanine nucleotide exchange factor 5; TrEMBL-Plants: tr|A0A1J7GUE4|A0A1J7GUE4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0084000 LjG1.1_chr1 12059434 12063540 +
2 domain predictions
1 GO term
LotjaGi1g1v0084000.2
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G05940.1 ROP guanine nucleotide exchange factor 5; Swiss-Prot: sp|F4K295|ROGF5_ARATH Rop guanine nucleotide exchange factor 5; TrEMBL-Plants: tr|A0A0B2QH98|A0A0B2QH98_GLYSO Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi1g1v0084000 LjG1.1_chr1 12059866 12063207 +
2 domain predictions
1 GO term
LotjaGi1g1v0084500_LC.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G05940.1 ROP guanine nucleotide exchange factor 5; Swiss-Prot: sp|F4K295|ROGF5_ARATH Rop guanine nucleotide exchange factor 5; TrEMBL-Plants: tr|A0A151R4W2|A0A151R4W2_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi1g1v0084500_LC LjG1.1_chr1 12140190 12140510 +
2 domain predictions
1 GO term
LotjaGi1g1v0084700_LC.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151U163|A0A151U163_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi1g1v0084700_LC LjG1.1_chr1 12140887 12142315 +
2 domain predictions
1 GO term
LotjaGi1g1v0391700_LC.1
n.a. rop guanine nucleotide exchange factor-like protein; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|I1KGN8|I1KGN8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0391700_LC LjG1.1_chr1 87602866 87606805 +
2 domain predictions
1 GO term
LotjaGi1g1v0476400.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G01700.1 RHO guanyl-nucleotide exchange factor 2; Swiss-Prot: sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2; TrEMBL-Plants: tr|A0A151TAZ6|A0A151TAZ6_CAJCA Rop guanine nucleotide exchange factor 2; Found in the gene: LotjaGi1g1v0476400 LjG1.1_chr1 98744364 98748609 +
2 domain predictions
1 GO term
LotjaGi1g1v0476400.2
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G01700.2 RHO guanyl-nucleotide exchange factor 2; Swiss-Prot: sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2; TrEMBL-Plants: tr|A0A0L9U3X8|A0A0L9U3X8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0476400 LjG1.1_chr1 98744583 98748609 +
2 domain predictions
1 GO term
LotjaGi1g1v0476400.3
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G01700.1 RHO guanyl-nucleotide exchange factor 2; Swiss-Prot: sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2; TrEMBL-Plants: tr|A0A151TAZ6|A0A151TAZ6_CAJCA Rop guanine nucleotide exchange factor 2; Found in the gene: LotjaGi1g1v0476400 LjG1.1_chr1 98744939 98748609 +
2 domain predictions
1 GO term
LotjaGi1g1v0476400.4
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT4G00460.2 RHO guanyl-nucleotide exchange factor 3; Swiss-Prot: sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3; TrEMBL-Plants: tr|K7MU94|K7MU94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0476400 LjG1.1_chr1 98745147 98748500 +
2 domain predictions
1 GO term
LotjaGi1g1v0476400.5
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G01700.1 RHO guanyl-nucleotide exchange factor 2; Swiss-Prot: sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2; TrEMBL-Plants: tr|A0A151TAZ6|A0A151TAZ6_CAJCA Rop guanine nucleotide exchange factor 2; Found in the gene: LotjaGi1g1v0476400 LjG1.1_chr1 98745312 98748311 +
2 domain predictions
1 GO term
LotjaGi1g1v0496100_LC.1
n.a. rop guanine nucleotide exchange factor-like protein; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|I1KGN8|I1KGN8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0496100_LC LjG1.1_chr1 101105202 101108325 +
2 domain predictions
1 GO term
LotjaGi1g1v0496100_LC.2
n.a. rop guanine nucleotide exchange factor-like protein; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|K7M904|K7M904_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0496100_LC LjG1.1_chr1 101106491 101108325 +
2 domain predictions
1 GO term
LotjaGi1g1v0577200.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151QTL3|A0A151QTL3_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi1g1v0577200 LjG1.1_chr1 111643594 111647164 +
2 domain predictions
1 GO term
LotjaGi2g1v0218300.1
n.a. Rop guanine nucleotide exchange factor; TAIR: AT3G24620.1 RHO guanyl-nucleotide exchange factor 8; Swiss-Prot: sp|Q9LV40|ROGF8_ARATH Rho guanine nucleotide exchange factor 8; TrEMBL-Plants: tr|I1KIP8|I1KIP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0218300 LjG1.1_chr2 67300619 67305777 -
2 domain predictions
1 GO term
LotjaGi2g1v0347200.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G31650.2 RHO guanyl-nucleotide exchange factor 14; Swiss-Prot: sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14; TrEMBL-Plants: tr|K7K403|K7K403_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0347200 LjG1.1_chr2 82383184 82406573 +
2 domain predictions
1 GO term
LotjaGi2g1v0347200.2
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G31650.2 RHO guanyl-nucleotide exchange factor 14; Swiss-Prot: sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14; TrEMBL-Plants: tr|K7K403|K7K403_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0347200 LjG1.1_chr2 82383275 82406573 +
2 domain predictions
1 GO term
LotjaGi2g1v0347200.3
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G31650.1 RHO guanyl-nucleotide exchange factor 14; Swiss-Prot: sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14; TrEMBL-Plants: tr|K7K403|K7K403_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0347200 LjG1.1_chr2 82383275 82406573 +
2 domain predictions
1 GO term
LotjaGi2g1v0347200.4
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G31650.2 RHO guanyl-nucleotide exchange factor 14; Swiss-Prot: sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14; TrEMBL-Plants: tr|K7K403|K7K403_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0347200 LjG1.1_chr2 82387092 82389748 +
2 domain predictions
1 GO term
LotjaGi3g1v0018200.1
n.a. rop guanine nucleotide exchange factor-like protein; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|K7M904|K7M904_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0018200 LjG1.1_chr3 1894904 1898851 +
2 domain predictions
1 GO term
LotjaGi3g1v0222000.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151SMC0|A0A151SMC0_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi3g1v0222000 LjG1.1_chr3 33561844 33566320 +
2 domain predictions
1 GO term
LotjaGi3g1v0222000.2
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151SMC0|A0A151SMC0_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi3g1v0222000 LjG1.1_chr3 33561971 33566319 +
2 domain predictions
1 GO term
LotjaGi3g1v0222000.3
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G02010.1 RHO guanyl-nucleotide exchange factor 7; Swiss-Prot: sp|Q9LZN0|ROGF7_ARATH Rop guanine nucleotide exchange factor 7; TrEMBL-Plants: tr|A0A151SMC0|A0A151SMC0_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi3g1v0222000 LjG1.1_chr3 33561971 33566319 +
2 domain predictions
1 GO term
LotjaGi3g1v0366900.1
n.a. rop guanine nucleotide exchange factor-like protein; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|V7AQ39|V7AQ39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0366900 LjG1.1_chr3 75308753 75314001 +
2 domain predictions
1 GO term
LotjaGi3g1v0366900.2
n.a. Rop guanine nucleotide exchange factor; TAIR: AT1G79860.1 RHO guanyl-nucleotide exchange factor 12; Swiss-Prot: sp|Q9CA89|ROGFC_ARATH Rop guanine nucleotide exchange factor 12; TrEMBL-Plants: tr|V7AQ39|V7AQ39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0366900 LjG1.1_chr3 75309541 75311636 +
2 domain predictions
1 GO term
LotjaGi3g1v0383300.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT4G00460.2 RHO guanyl-nucleotide exchange factor 3; Swiss-Prot: sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3; TrEMBL-Plants: tr|V7AS76|V7AS76_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0383300 LjG1.1_chr3 77737369 77742244 +
2 domain predictions
1 GO term
LotjaGi3g1v0383300.2
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT4G00460.2 RHO guanyl-nucleotide exchange factor 3; Swiss-Prot: sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3; TrEMBL-Plants: tr|V7AS76|V7AS76_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0383300 LjG1.1_chr3 77738131 77741425 +
2 domain predictions
1 GO term
LotjaGi3g1v0383300.3
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT4G00460.2 RHO guanyl-nucleotide exchange factor 3; Swiss-Prot: sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3; TrEMBL-Plants: tr|V7AS76|V7AS76_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0383300 LjG1.1_chr3 77738408 77741067 +
2 domain predictions
1 GO term
LotjaGi3g1v0533000.1
n.a. Rop guanine nucleotide exchange factor; TAIR: AT4G38430.1 rho guanyl-nucleotide exchange factor 1; Swiss-Prot: sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1; TrEMBL-Plants: tr|A0A0S3SE88|A0A0S3SE88_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0533000 LjG1.1_chr3 94977029 94981049 -
2 domain predictions
1 GO term
LotjaGi3g1v0533000.2
n.a. Rop guanine nucleotide exchange factor; TAIR: AT4G38430.1 rho guanyl-nucleotide exchange factor 1; Swiss-Prot: sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1; TrEMBL-Plants: tr|A0A0S3SE88|A0A0S3SE88_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0533000 LjG1.1_chr3 94977567 94980594 -
2 domain predictions
1 GO term
LotjaGi4g1v0142800.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT1G31650.1 RHO guanyl-nucleotide exchange factor 14; Swiss-Prot: sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14; TrEMBL-Plants: tr|K7MGA4|K7MGA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0142800 LjG1.1_chr4 22417718 22424989 +
2 domain predictions
1 GO term
LotjaGi6g1v0068200.1
n.a. Rop guanine nucleotide exchange factor, putative; TAIR: AT5G05940.1 ROP guanine nucleotide exchange factor 5; Swiss-Prot: sp|F4K295|ROGF5_ARATH Rop guanine nucleotide exchange factor 5; TrEMBL-Plants: tr|A0A151R4W2|A0A151R4W2_CAJCA Rop guanine nucleotide exchange factor 1; Found in the gene: LotjaGi6g1v0068200 LjG1.1_chr6 13004081 13009124 -
2 domain predictions
1 GO term