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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0240000 |
| Transcript ID | LotjaGi3g1v0240000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G58690.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4JEQ2|PBL23_ARATH Probable serine/threonine-protein kinase PBL23; TrEMBL-Plants: tr|A0A0B2RUL3|A0A0B2RUL3_GLYSO Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi3g1v0240000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:38815411..38819184) extracted from Lotus japonicus Gifu genome v1.2.
ATCGAGTACTAAAATGCAAAAAGAGAGTATAATTAGCATCAGTGTTCTTATTCTACGCGCCATTAAGCAAAAGCTCAAAG AGTGAGTCAGAGAGAGACTGTGTCTTCGAACTTCACAAAACTGCTGCAAAAACCACCTGATTTTTTCCCCTTCTTCTTGC TTCACGCACTGTGCTTGAACCATTTCTAGGGTTAGGGTTCTTTGCTTCTTCTGAGATGGAAGAGGATGATGCTGGGTACA GAAGGAAGGCCAACATTGCAGTCGTTTCCATCGTGGTGCTTGCTTCCCTCGCCGTCTTTGCTTCACTGGTTGCCTTTGCT TACTACTGCTACATCCGCATCAAAGTCTCCAAACGCCGCAAAAGCCAGAAAGGTATTATGGGTCTGTTTCTGTTTGGTTG CCGAGAAAATCTCAGAAAATGTTGGGGGTAGTGTCAAGGTTCGGTTTTTCATCCTCTGGAAGAAAGAGAGATCAAAGGGG ATATAGAGATTGATAATGGGCTATTGTGTGTTGTGTAGTATTCTATTTTTGTTTGTTCTGCATTTTTCTGACCCTCTGGA TTTCGGGCCTTGTGGAAATTTTGGTAAAAACTTGTTCTTTTATCCAGGAAAATTAACCAAAAATGTTTGCTTTTTTCCCT TTGAGGAGGGAGGGGGTTGATTTTACTTGAGTTTCATGCAGTTTTCAGCATAAAATGGAACATTTAGATGAGACACTGAA ATATTTAATTATGATTTACTCCCTCCGTCCCCTATTATAAGACCCCTCCGTCACCAACCAACTAACTTTACCATAAGGGT CACATATGAAGTAAAATTGTCTATTCCACCCTGCCTTGTTCAAACTTGGATATCAAGTACAAGTAGGATGTATTATGTTT TCTTTGTATTCGGTTTTAGTTGATAATGATGATCACATAAGAACAGGAAATATGATGCAGCTAATTTAGACACTGCTTTT TCTGGATTTTAAACTGTGATGCTTTTTATCAATTCTCCATGGTTTTAAAGTAACTTTTGGTTGTTTCCTTTTGAACTTTT CCCTCTAATCTTTTCCTTCTCTATCTTACCCGAATGAGTTGATTTGATACCCCACTTACTGATACACGGTACTTGGTTCT ATGTTAGTTGAAGACGCTAACCTTAACGAGAAAAGTGAATTTGCAAACCTGCAAGTTGTTGTTGAGAAAGGACCTCGGGT GTTTACTTTCAAGCAGCTGCATTCTGCTACAGGGGGCTTCAGCAAGTCAAATGTGATTGGTCATGGCGGCTTTGGACTTG TTTACCGCGGAGTGCTCAATGATGGCAGGAAAGTTGCAATTAAGCTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAA TTTAAAGTAGAGGTATGTTTCCTCTTAGAACATTTTAACCAGCCTTGTCTATTTTCTAGTAATTGTGGGAAAGGGAATGT GTTATTCTGATGCATATGCTTGATTTTCTCTTGTAATAAAAAAAGTAAAATTTGTTGAGTATGAATAATCAATTTCTTTT TGGCAATGATCCAATGAATTTGTTAGCATTCAGTGGCTTGGGAGGGTAATTCACTGCGGGAATGTGTTGAATTGGTTGAT TACATCTCACTGCAGGTGGAATTACTAAGTCGGTTACATTCTCCATATTTGTTGGCATTGCTTGGGTATTGCTCTGATAG TAATCATAAACTGCTGGTGTACGAGTTTATGGCGAATGGTGGCTTGCAGGAACATCTTTATCCTGTCAGCAGTAAGTAAT GAACTAAATATTTACTAGTAGTTTTTGTTCTTACCTAATAAGGCCATGAACAATGTAAATAATGATTTGATGAGTGAATG ATTTTAATGAGGATAATCATTTTGTTAGTTTGATTTTACCACTAAGCTCAACCAACCAACATTCTAGTGTAATTCTCAAG TAGAACCACCCATATATTATATATAGAGGCAGTTGAAAATCATTTAGGATGAACTACGATTTACTTGCAGAAGCTTAGGT TGTTAGTGAGTCAACCATTCAAAATTTGAGTATATTTTGAACTTTTTGAATTGTTCTGTTTAATCAGGTAATTGTATTTT ATCTAATATTTAAAGAAGAAGGAAAATAAATAAACAACCGGCCTAATGATGTAACTTGCAACTTGTTTAAAAACCAAGAA TTCTTATTCCACCATGAATCATGGTTGCTATTTTTTGTCCAATATATCATGTTATTTTGTATGGTGAAGTTTATTTTTAT GAGTTGGCTTACTTGTAGATTCTAATGTTACACCCATGAAGTTGGATTGGGAAATTCGATTAAGAGTAGCACTCGAAGCT GCCAAAGGTTTGGAATATCTTCATGAACATGTTAGTCCCCCAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTT GGATAAGAGATTTAATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAA CCCGCGTTTTAGGCACCCAGGGATATGTAGCCCCTGAGTACAATTCATAACTCATAATTTACTTTTACATTGTTTTGTTA ATCTGTTATTATAATCTCCATTTTTATTTAATGATCGTCCCTTGAGAAATTTCCTCTCATGAAAAAAACTTACACTATTT TGTGCATGGGAATGTTTGATTGTGCAGATATGCACTAACTGGGCATTTAACAACAAAATCAGATGTGTACAGCTATGGTG TTGTACTCTTGGAGCTGCTCACAGGTCGAGTGCCAGTTGATATGAAAAGACCCCCAGGGGAAGGTGTTCTTGTTTCTTGG GTGAGTTTGTTAATTCTTTTTACTCATCTCGATGTTTTTCCATTTATGAGAATCTGAGTATTACTTTATAGGATGTTTGG AACAACTTGTCTTTCCTCAGAACCTCAGAATTTATTTTGGCACTCAAAAGCTACTCATTATCCTAAGAATTGATTTTGAC TTTAGAATCAATGGTAGAAGGATTTTTGGAACACTTTACTTTTTCTGACAAACTTGCATTTACTATTTCTGTTTAGGCTT TGCCCCTTTTGACTGATAGAGAAAAGGTTGTGAAGATTATGGATCCTGCAATGGAGGGACAGTACTCTATGAAAGAGGTT ATCCAGGTAGCGGCAATTGCTGCGATGTGTGTGCAACCAGAGGCAGATTATCGACCTCTAATGGCAGACGTTGTGCAGTC GTTGGTGCCGTTGGTGAAGACTAACAGGACCACCTCAAGGGTTGGAAACTGCTCCAGTTTCCATTCCCCTATGTTGTCCC CAGGCCAACATCTAGTTACCACAGATATGTAATGTACTATCAATATACAGATTAATAGTATCCTTGGATTCACTTTTCAT TTCCACATTTGAGTCCAAAGCCACTTCCTCCATGAAGCTACATTGAGCAGCTTTTAGCCACAATTTGCATAGGGTTGTTT GCAAGACTCACAATCAAACATGCATTGATAGAAATGCTTGCTTACCAAACTTAAATTTGGATGCTTGTTAGTTGTTAGTC TGCGGTTTCTTTGTAATTTTGAACCATATGGAATCAAGATTTTCTGTCCTTAAATGGTGTATCAATTTTTGTTCTACTGA TGGAATCTTACCATGTCAATTAAAAAATTATGAGTGGGGAAGTTATAAACTTAAATGATAGTTTTTAGCTGACATGGTTA AAATTTTATTGGTTGGATAGGAAAGAGACACCATTTAGGGACATAAGACTCCAATCAAACCATTTTATGCCCTTTGGAGA AAAAAAATTGTTGG
CDS sequence (LotjaGi3g1v0240000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGGATGATGCTGGGTACAGAAGGAAGGCCAACATTGCAGTCGTTTCCATCGTGGTGCTTGCTTCCCTCGCCGT CTTTGCTTCACTGGTTGCCTTTGCTTACTACTGCTACATCCGCATCAAAGTCTCCAAACGCCGCAAAAGCCAGAAAGTTG AAGACGCTAACCTTAACGAGAAAAGTGAATTTGCAAACCTGCAAGTTGTTGTTGAGAAAGGACCTCGGGTGTTTACTTTC AAGCAGCTGCATTCTGCTACAGGGGGCTTCAGCAAGTCAAATGTGATTGGTCATGGCGGCTTTGGACTTGTTTACCGCGG AGTGCTCAATGATGGCAGGAAAGTTGCAATTAAGCTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAATTTAAAGTAG AGGTGGAATTACTAAGTCGGTTACATTCTCCATATTTGTTGGCATTGCTTGGGTATTGCTCTGATAGTAATCATAAACTG CTGGTGTACGAGTTTATGGCGAATGGTGGCTTGCAGGAACATCTTTATCCTGTCAGCAATTCTAATGTTACACCCATGAA GTTGGATTGGGAAATTCGATTAAGAGTAGCACTCGAAGCTGCCAAAGGTTTGGAATATCTTCATGAACATGTTAGTCCCC CAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGATAAGAGATTTAATGCTAAAGTTTCTGATTTTGGATTG GCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACCCGCGTTTTAGGCACCCAGGGATATGTAGCCCCTGAATA TGCACTAACTGGGCATTTAACAACAAAATCAGATGTGTACAGCTATGGTGTTGTACTCTTGGAGCTGCTCACAGGTCGAG TGCCAGTTGATATGAAAAGACCCCCAGGGGAAGGTGTTCTTGTTTCTTGGGCTTTGCCCCTTTTGACTGATAGAGAAAAG GTTGTGAAGATTATGGATCCTGCAATGGAGGGACAGTACTCTATGAAAGAGGTTATCCAGGTAGCGGCAATTGCTGCGAT GTGTGTGCAACCAGAGGCAGATTATCGACCTCTAATGGCAGACGTTGTGCAGTCGTTGGTGCCGTTGGTGAAGACTAACA GGACCACCTCAAGGGTTGGAAACTGCTCCAGTTTCCATTCCCCTATGTTGTCCCCAGGCCAACATCTAGTTACCACAGAT ATGTAA
Protein sequence (LotjaGi3g1v0240000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEDDAGYRRKANIAVVSIVVLASLAVFASLVAFAYYCYIRIKVSKRRKSQKVEDANLNEKSEFANLQVVVEKGPRVFTF KQLHSATGGFSKSNVIGHGGFGLVYRGVLNDGRKVAIKLMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDSNHKL LVYEFMANGGLQEHLYPVSNSNVTPMKLDWEIRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKRFNAKVSDFGL AKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREK VVKIMDPAMEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTNRTTSRVGNCSSFHSPMLSPGQHLVTTD M
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 39 | 28 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 40 | 401 | 362 | - | – | |
| Gene3D | 47 | 165 | 119 | 7.5E-32 | – | |
| PANTHER | 57 | 373 | 317 | 3.9E-172 | – | |
| PANTHER | 57 | 373 | 317 | 3.9E-172 | – | |
| SUPERFAMILY | 71 | 366 | 296 | 6.01E-80 | ||
| ProSiteProfiles | 90 | 370 | 281 | 38.336 | ||
| Pfam | 91 | 300 | 210 | 4.0E-43 | ||
| ProSitePatterns | 96 | 118 | 23 | - | ||
| CDD | 96 | 369 | 274 | 6.65078E-98 | – | |
| Gene3D | 166 | 384 | 219 | 2.5E-58 | – | |
| ProSitePatterns | 215 | 227 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0240000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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