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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0244100 |
Transcript ID | LotjaGi3g1v0244100.5 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Alpha-1,3-mannosyltransferase, putative; TAIR: AT1G78800.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q7KWM5|ALG2_DICDI Alpha-1,3/1,6-mannosyltransferase ALG2; TrEMBL-Plants: tr|C6TI07|C6TI07_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0244100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:39799531..39803409) extracted from Lotus japonicus Gifu genome v1.2.
TTCCATGTATGTTTTCTCGCCGTACGCATTGACCACCAACCCTACTCCGCCGCCGCCAACGTTATCACCGCCGATCTCTG TTGCTGCCAACAGTATCATTCCGATCTCCGCCCTATTACGCCATGGTTCGCCACTCAAACCATTGGAATCGCACTCTCTG GTTCTGATGTAAGCCTAAACGTTTCCTCTTTGCTTCGATTTAGAATTCAATTTTAGCTAAATCTTCGTTTTCTACCTCAT TCATTTCTGTTTCTCACATTTCTTTCATTCAACCCACTGGTTTCTTAAATTCTTCTTCGATTTCTTCTTCGTTTTCACGG CAATTTCATTTTTGATTTCTCACTCGCACTATATTTTCGCGATCTGCAATCAGAATCGGTTATCTTGAAGTTGATCACTC TCGTGCTTATTGCTTCCGTGAGGCTGAAAGTATTTGATCCACTAATTTGATATTTGATCATTGCGGTGCTTATTGTTTGT TACAGCTCAACCTGCATTTTCTCTTTCACCTTGGCATCTTAGATTGAAATCAAGGTCAGTGCATCAAATTCAATTGTATG TTATACTAAGTCTTTAGCTTGTGTTTTTGTGACTGGATATGCTTGGGAAACTACATTGACATGATTATAGCTGTGTGCTG CTGATGGCCCGCCACCGTCACAACCTCAGAATCTCTGGCAGTGATTGATTTCTGATTTGCTATTTTCATCTTCAATTTCC CACTCAACATGGCAAAGGGCACAAGCTCAGAGATGAACATTGCCATTATCCACCCTGATCTTGGCATAGGCAATAATTAA CTGCCCTTTATTCTATTCGAATCAAAATCAAAAAAAATTCTGTGCCCATTAATTTTTTTCTTCCCTATACTTACAGTTGA TTCTTATTACCTTGTGATTGTTTTGCAGGTGGAGCTGAAAGATTGATCGTTGATGCAGCTGTTGAGCTTGCATCCCATGG TCATAATGTTCATGTTTTTACTGCTCATCATGATCGAAATCGATGTTTTGAGGAAACTGTTGCTGGTGAATCTCTGTCTT TGTATATATATGTGTCTGTGATTGCCACATTTTGTGTTCTTTATAAGGAAATGCATTGTGTTAAGATATAGTTTGACTTG TAATTGTTTCAGGTACATTTCCTGTTACTGTCTATGGTTCCTTTCTTCCGCGGCATATATTCTACCGTCTTCATGCATTG TGTGCTTACCTTCGATGCCTATTTGTTGCTTTCTGTGTGCTTTTCATGTGGCCATCATTTGATGTTATACTGGCTGATCA GGTCTCTGTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAAGGTAGCTAGCAATAAGAATCATGTGTTGTAAATTC AAGTTTTGGCATTCACGGTTCGTCTTAGTTGCTTATTTTTCTTGCTAGGTTGTGTTCTACTGTCATTTTCCTGACTTGTT GCTGGCTCAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCATAGACTATGTAGAAGAAATAACAACTGGTTGGA CTTTGTATTCTTGCTTTATGTTTATTTATTTATTTCTGAACAAGGTTTTAAATTGTGGTCACATCACGGTTGCGTTGCGG TCCTTCATATTGTGATTAAACATGGCTGTTGCGTCCAAATCGCGGTCGGGCTCCAAAACCTTGATGTTGCGGACCTTGAT TTAAAACCATGTTTCTGAACTTCTTTTCTCACTTGTAATCAAGCATCTTATTAAGCATTGCTAAATTGCAGGAATGGCTG ATTTGGTACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCAAATACGTTTAAGCAACTAGATGCTAAAGGAATTCGA CCAGCTGTTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGAACCCACTTCCTTTAGGTAAATGACATGTTTGTAGAT GTATGGTCAATACAAGATTATGCATGTAGCTTATTCTTATAACCAATTTTATTATAATTATGCTTCTGCTGTATTTTTTT TCCTGTTGTAGGCTGAATTTTCTTTCCATTAACCGCTTTGAGAGGAAGAAGAACATAGAGTTAGCAATTTCAGCTTTTTC TATGCTTTGCTCACCTAATGGACTTCTTAAAAATCAAGATACTACCGATGCTTCTTTGATTGTTGCAGGTCAGTATGTTT TTCTTATGACTTCACATTTCTTAAGACAGATTGATAGATATTAGATGGTATGCTCATTATTAACTGTTCTGGGGATGTCT GTCATGACTCATGATGTATGTGCCTTAGACTGGAGTTTGGTAAAGCAGTGTCTTAGTTATGTTTGGTTCTTAGTAATGTT TTAAATTCTTGTATTATTTTTCAATCATTTCAAAAGACTTGTTTGTTCTGCGGAATCTTCTCAATAACACAGCTTGTTGG TAAATTATCTTTGTGAAGCTTTCTTGGTTCAATCATTTCAATCAGATGCATTAGCTTGGATTTGTTGTTGTGTTTTACTT CGAACCTTTATATAACTGACGTGGAAACTGCATGAAGTTTATTTTCTTATGTATTAAAAATGAGTTGTTAATTTTTATAA ACCGTTATTTGGTGACAGAAAGTTCATTTATTGATCTTGTAAGTATAATGCTATATAGCCCATAGTATGAGGTGTTTAGT ACATAGTTATATCTATATTGCCAATGTTATCATGAAGAAACTGATTGAGATGATGATGTTTTGTATCATGATAAGTTTTT GGTGCCAGTCAATTCATTAATCTAAAAATTAAAATATGAATGAGAAATTTATCTATCTCTACCATTTTGGTGTGTTAGTT TAGTTATATTTAAAGGCCTTCTTGTTGCACTCAGCTTTGATTTATATATACATTTTCTTGGCAGTATAACTGGGTCCTAA GTTTGAAGTTTAACCAGCCATACTTATTATTTCAATTGAAGCATTAGGCGCAATTTGAGAGTATAAAATCTATTTTCATA AATTGTTCCAGGTGGTTTTGATAAGCGGTTGAAGGAGAGTGTGGAGTACTTGGAAGAGCTTAAAAATTTAGCTGAAAGGG AAGGGGTCTCTAACCAAATAAGATTCATCACATCTTGCACTACAGCTGAAAGGAACACTCTTCTTTCAGAATGCCTATGT GTACTTTACACGCCAAAGGTATGTGAAACCTTATTATGATTCCTGAAAATTGGTAGAAGTTGACTTAAGAGTTTTACATT AAGATCTTCGATACAGGATGAACACTTTGGCATTGTTCCTATAGAGGCAATGGCAGCTTATAAACCTGTTATTGCGTGCA ATAGTGGTGGCCCGGTGGAGTCAATCAAGAATGGTGAAACAGGATTCCTTTGCGATCCTACACCACAGAAGTTTGCTTCA GCAATGGCTAGCCTCATAAATGATCCTCAGGGAGCAGAAAGAATGGGCAGAGAAGCTAGGAGGCATGTTGTTGAGTCATT CTCTACAAAGACATTTGGCGAACGTTTAAATAGATATTTAGTTGACATTCACCGGGAGAAGGAGGATTGAGTTTAAGATA TTTTTCCCTCAAATTGTTAACTGCAATTGCTGACCATTGAAGGCACTGTAGTTAACATTTTTGCCAAAATTTCTATTTAA GATGATTTTTATTTTATACCATGTAAATTTTTACCTGAGAGGATCACATGTTCAATGTTGAGGCTTGCACTTTTGGATAT TTGCAGACATTATAAATGCATTGCAAAGTTTATAGAGAAATTTTCTGTGCTATATTAGAACCCTAGTGCTGATCCAATTT TGATTTCAAAGTGAAAAAAGGACCGAGCCAGGATCATGATAGTTGTGGTTTGCTTAGGGGACCAGTATCAGTTCAATTTT GCAAAAGAAACTGAACACCCAGTGAAGGCATAGTGGCCT
CDS sequence (LotjaGi3g1v0244100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGGGCACAAGCTCAGAGATGAACATTGCCATTATCCACCCTGATCTTGGCATAGGTGGAGCTGAAAGATTGAT CGTTGATGCAGCTGTTGAGCTTGCATCCCATGGTCATAATGTTCATGTTTTTACTGCTCATCATGATCGAAATCGATGTT TTGAGGAAACTGTTGCTGGTACATTTCCTGTTACTGTCTATGGTTCCTTTCTTCCGCGGCATATATTCTACCGTCTTCAT GCATTGTGTGCTTACCTTCGATGCCTATTTGTTGCTTTCTGTGTGCTTTTCATGTGGCCATCATTTGATGTTATACTGGC TGATCAGGTCTCTGTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAAGGTTGTGTTCTACTGTCATTTTCCTGACT TGTTGCTGGCTCAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCATAGACTATGTAGAAGAAATAACAACTGGA ATGGCTGATTTGGTACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCAAATACGTTTAAGCAACTAGATGCTAAAGG AATTCGACCAGCTGTTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGAACCCACTTCCTTTAGGCTGAATTTTCTTT CCATTAACCGCTTTGAGAGGAAGAAGAACATAGAGTTAGCAATTTCAGCTTTTTCTATGCTTTGCTCACCTAATGGACTT CTTAAAAATCAAGATACTACCGATGCTTCTTTGATTGTTGCAGGTGGTTTTGATAAGCGGTTGAAGGAGAGTGTGGAGTA CTTGGAAGAGCTTAAAAATTTAGCTGAAAGGGAAGGGGTCTCTAACCAAATAAGATTCATCACATCTTGCACTACAGCTG AAAGGAACACTCTTCTTTCAGAATGCCTATGTGTACTTTACACGCCAAAGGATGAACACTTTGGCATTGTTCCTATAGAG GCAATGGCAGCTTATAAACCTGTTATTGCGTGCAATAGTGGTGGCCCGGTGGAGTCAATCAAGAATGGTGAAACAGGATT CCTTTGCGATCCTACACCACAGAAGTTTGCTTCAGCAATGGCTAGCCTCATAAATGATCCTCAGGGAGCAGAAAGAATGG GCAGAGAAGCTAGGAGGCATGTTGTTGAGTCATTCTCTACAAAGACATTTGGCGAACGTTTAAATAGATATTTAGTTGAC ATTCACCGGGAGAAGGAGGATTGA
Protein sequence (LotjaGi3g1v0244100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKGTSSEMNIAIIHPDLGIGGAERLIVDAAVELASHGHNVHVFTAHHDRNRCFEETVAGTFPVTVYGSFLPRHIFYRLH ALCAYLRCLFVAFCVLFMWPSFDVILADQVSVVIPILKLKRSTKVVFYCHFPDLLLAQHTTFVRRMYRKPIDYVEEITTG MADLVLVNSNFTKSTFANTFKQLDAKGIRPAVLYPAVNVDQFNEPTSFRLNFLSINRFERKKNIELAISAFSMLCSPNGL LKNQDTTDASLIVAGGFDKRLKESVEYLEELKNLAEREGVSNQIRFITSCTTAERNTLLSECLCVLYTPKDEHFGIVPIE AMAAYKPVIACNSGGPVESIKNGETGFLCDPTPQKFASAMASLINDPQGAERMGREARRHVVESFSTKTFGERLNRYLVD IHREKED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 78 | 78 | - | – | |
PANTHER | 5 | 405 | 401 | 8.2E-193 | – | |
PANTHER | 5 | 405 | 401 | 8.2E-193 | ||
CDD | 9 | 394 | 386 | 0.0 | – | |
Gene3D | 9 | 204 | 196 | 9.2E-12 | – | |
SUPERFAMILY | 11 | 397 | 387 | 6.28E-68 | – | |
Pfam | 20 | 200 | 181 | 3.0E-16 | ||
Phobius | 79 | 99 | 21 | - | – | |
TMHMM | 83 | 102 | 20 | - | – | |
Phobius | 100 | 407 | 308 | - | – | |
Gene3D | 205 | 385 | 181 | 8.0E-43 | – | |
Pfam | 212 | 379 | 168 | 6.0E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity | Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage. | ||
Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. |
Expression pattern of LotjaGi3g1v0244100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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