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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0247900 |
| Transcript ID | LotjaGi3g1v0247900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ketol-acid reductoisomerase; TAIR: AT3G58610.1 ketol-acid reductoisomerase; Swiss-Prot: sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic; TrEMBL-Plants: tr|G7JCK0|G7JCK0_MEDTR Ketol-acid reductoisomerase; Found in the gene: LotjaGi3g1v0247900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:40946339..40947706) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGAAGATTTGGCTTATAAGAACACTGTTGAGTCCATAACAGGGATTATATCTAAAACTATCTCAACTAAGGTTGT GATCTCTTACTCATTTTAGTGCTGAATAGTCTTTAGGATTTTTTCCTGAGCATGTGATGGGCTTTTTGTGAGCTGTAACA TGAACCTTTGTTCATTTTATTTGGATAGGGCATGTTGGCTGTATATAATTCTTTCTCAGAAGAAGGAAAGAGGGAATTTG AGAAAGCATATAGTGCTTCATTCTATCCTTGCATGGACATTTTGTACGAGTGCTATGAGGATGTAGCTAGTGGTAGTGAG ATTCGCAGTGTTGTTTTGGCCGGACGTCGCTTTTATGTAAGTGCACATTTATTTCTAGTTTAAGGCTGCTTTTTATTCAA CAGATTTACAATTGCACCTGTGTTTTACAGGAGAAAGAAGGTCTGCCTGCATTTCCCATGGGTAAAATTGATCAAACCCG GATGTGGAAGGTTGGTGAGCGTGTTCGTTCCACAAGGCCTGCAGGTGATCTAGGCCCTTTGAATCCATTTACTGCTGGTG TCTTTGTGGCATTGATGATGGCCCAGGTATCCGTTCTTATTCTGTTAGCAATTTTTCTCGCTAGTTTATTTGTAGTTGAT ATGTACTTTGAACATATATTCCCTGCTGCAAGCATTCCTATCTTTGTCCTCAAACTGTGAAAAAGTTCTTTTGAAGTGAG ATTTTTTCCAACGTAATCATGTATCTTAAGTTTCAGTACGTTCAATTCTCTACACTTTTAATTAAATTGAAGGAAAATAT AACCTTGCTCGTTTTAGTAAATCTCTGTCCTCAAATTTCAGACTTACTAGTGACTAGTGTCTATCTATCAATGGCAAAAG ATGTATTCTTATAAATTCTTACCTTAACAATCATTTTTCTTGCATATCTTTTTCTTGGGCTAGAATGAATACAAAGGTGA CCTTTTGTTTTTTCACATTTATGATCATAAAATTTGCAGATTGAGGTCCTGAGGAAGAAAGGGCATTCATACTCTGAAAT CATCAACGAGAGTGTGATTGAGTCAGTTGACTCTTTGAATCCATTCATGCACGCTCGTGGTGTTTCTTTCATGGTTGATA ACTGCTCAACCACTGCAAGGTTGGGTTCAAGGAAATGGGCTCCCCGGTTCGATTACGTCCTGACTCAGCAGGCCTTGGTG GCTGTGGACAATGCAGCACCTATCAACCAGGACCTGATCAGCAACTTCCTGTCAGACCCAGTGCACGGAGCCATTGAGGT TTGTGCAGAGCTTAGACCAACTCTGGACATTTCAGTGCCACCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAATCTA GCTATTAG
CDS sequence (LotjaGi3g1v0247900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAGATTTGGCTTATAAGAACACTGTTGAGTCCATAACAGGGATTATATCTAAAACTATCTCAACTAAGGGCAT GTTGGCTGTATATAATTCTTTCTCAGAAGAAGGAAAGAGGGAATTTGAGAAAGCATATAGTGCTTCATTCTATCCTTGCA TGGACATTTTGTACGAGTGCTATGAGGATGTAGCTAGTGGTAGTGAGATTCGCAGTGTTGTTTTGGCCGGACGTCGCTTT TATGAGAAAGAAGGTCTGCCTGCATTTCCCATGGGTAAAATTGATCAAACCCGGATGTGGAAGGTTGGTGAGCGTGTTCG TTCCACAAGGCCTGCAGGTGATCTAGGCCCTTTGAATCCATTTACTGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGA TTGAGGTCCTGAGGAAGAAAGGGCATTCATACTCTGAAATCATCAACGAGAGTGTGATTGAGTCAGTTGACTCTTTGAAT CCATTCATGCACGCTCGTGGTGTTTCTTTCATGGTTGATAACTGCTCAACCACTGCAAGGTTGGGTTCAAGGAAATGGGC TCCCCGGTTCGATTACGTCCTGACTCAGCAGGCCTTGGTGGCTGTGGACAATGCAGCACCTATCAACCAGGACCTGATCA GCAACTTCCTGTCAGACCCAGTGCACGGAGCCATTGAGGTTTGTGCAGAGCTTAGACCAACTCTGGACATTTCAGTGCCA CCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAATCTAGCTATTAG
Protein sequence (LotjaGi3g1v0247900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEDLAYKNTVESITGIISKTISTKGMLAVYNSFSEEGKREFEKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRF YEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLNPFTAGVFVALMMAQIEVLRKKGHSYSEIINESVIESVDSLN PFMHARGVSFMVDNCSTTARLGSRKWAPRFDYVLTQQALVAVDNAAPINQDLISNFLSDPVHGAIEVCAELRPTLDISVP PDADFVRPELRQSSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 254 | 254 | 5.1E-167 | – | |
| ProSiteProfiles | 1 | 113 | 113 | 22.706 | ||
| PANTHER | 1 | 254 | 254 | 5.1E-167 | ||
| Gene3D | 1 | 252 | 252 | 8.1E-134 | ||
| Pfam | 2 | 111 | 110 | 2.8E-17 | ||
| SUPERFAMILY | 3 | 252 | 250 | 3.4E-79 | ||
| ProSiteProfiles | 114 | 250 | 137 | 20.407 | ||
| Pfam | 124 | 195 | 72 | 1.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ketol-acid reductoisomerase activity | Catalysis of the reaction: (R)-2,3-dihydroxy-3-methylbutanoate + NADP+ = (S)-2-hydroxy-2-methyl-3-oxobutanoate + NADPH + H+. | ||
| Biological process | Branched-chain amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0247900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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