Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0260800 |
| Transcript ID | LotjaGi3g1v0260800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transthyretin-like S-allantoin synthase protein; TAIR: AT5G58220.1 transthyretin-like protein; Swiss-Prot: sp|Q9LVM5|TTHL_ARATH Uric acid degradation bifunctional protein TTL; TrEMBL-Plants: tr|A0A151QU94|A0A151QU94_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0260800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:47617178..47622951) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTGGTAAAAAGCTTCAACCATTGTTCACTTGTTAGCACTAGTAACTTCTTTTCCAAACTGCTTTTGGCAGGTGGAGT AAGGGAGAACAATCAACTGCATTAGCAACTGCTACTGGTTCTAGCTCACAGGTTTGCTTGCTGCTGCCCTTAAATAAACT TGAAATACTTTAATGCTATTTGCTGTTGTATGAAATATGCCGAAACTGATTGATCTCTGGATCTGCTATCAGAATACTTT AGATAATTTGTATAAGGGTATTGAATTGAAATAGCACTACCTTTGAGAGAGTTCAACTTTCTTACTAGGTAGTGCATATG GTTTCAATTTTGGATCCTTCATTTGCTGGTCCTACGTTATGGTGTACTTTATTATTATCATGGAGGAACTATTTGTCCAT CTGAATAACTGGGCATGGGATGAGGCAACAAACATGAGGTTCTGGCTTTCTGGGGGCACTTCAACTTCTATGTTAACTGT TCATAAATGAAAGTTAGTGATTTATATGCTCTCCATCTAACTTTTGTAGGAACTATCCGAATGGAATGCTCGATATATGC AGAAGTTTGGGTTTGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGGTAAATTTG AACTTATAGTCTAGTGTTGGCAAATGTTTTATTTATGGTCTTTGTAGGTGACAATGTACATCTATTTCTTATTCAAAGAT AAAAAAACTGCATTGATTAGTTTTAGAGGATTGAGCTGGTGAGAGTTTTGGTATTTTTTCTTTTTATCTTAAAAACATTT CAAATGATAATACGGGTGACATTTTTGGATTTGAAATACTAACCAGTAGTAATTTCTGGAACCTTTCTTGGTGACATTGT TTTGATGGATAAATGAATGACTAATATATTTTCATAGAAGAGTACTTCATGATGTCAACAATTAGTGCATATGGTTCAAA ATGGACGCCGCACCAACAGAGTGTGAAATTCTACAAGTTGCTAGAAGTTTTTTTGTCTTGAAAATACCTCTTATAGAAAA GGGTGTACAACGAGTGATTTGGAAATTTTGGATAAACTTATTCTTTGGTCATCGATCACCCATGATCAATATGTGGTGCT AACTGCTCATATTATGTTACTTAAATTAGAGTTAAAGAAGAAAGTGTTGACTTTCTTCCATATTCTACCACCTCTTATGG TGCTAATTTAGCTAAGAAGTTTCCGAATATCTTAAAAGAGTGAAGTTTAGATATAAAAAAAATCACTCTTACTTTACGAT GTGTCTTAGAATGACAGCATGGTAAATTAGTTGTTAATAGAGATTATTTACATTAGGTGTGATGCATATATTTTAAACTT GATTGTTTAAGAATGTTTGAAAGTAATAGATGATGCTTTGACTAAAATCCAAAAAATTGTGGAATACATTAGTGGATAGA TGCACAAGAAATGAAGTTTGTATCACCACTATCATGTTTAGAGCTATTCTCCCATGTAGTTTCTAAGCAACTTGGTCAAG ATGTGCCCATAAAATGGAACACCATATTATTTTTTTGTACGAGGGTGCTATAGGTTTTCAAGAAGTCTTTGTACTAAGAA ATATAGATCCCTTTTTTTTAGTTGTTTGTTTATCACAAGAGGAGTGGGTTCAAGGAATAATAGAGTGCTTAAAGTCTTTT TATGATATCACCCCTCGTTTTTCATACAATAATTTTGCAACTGACAATTTATATTTTTATGGTATATGTAGGACAATGTA AATAGGATAGACCCACCATTAGAATACATTGCAAGTCTAATGCCATAACAACAATGGCCCTAGTTATGATAATGTGTGAG CCTGTGAGGTTGTTACAGTCTTCTTATTTCGAACATTTGTGGGATGGATATTTTGATACATTCAAACTACTCAAATTCTT CACTACAAATGAAGAAAACTAAACAAGGTTGTATAAATATGAGAGAGAGAATTGTATAGAGATAAAACATTGAGGAGAAA TTATGGAGTTAAAAAAGGGTAGAGAAATAGTTTTTTGGATGGGTTGGATATAAAAGGGCAAACCTGGTGCAATAAAGCTC CCTTTATGTGCGAGATACGATCAGAGGCCGCATCCACGTAGGCAACCTTACCTTGCATTTTTTGCAAGAGGTTGATTCCA AGGCTCGAAGCTGTGTCTGCAAAGTCAGCAACCTTACCGTTTTAGCGAGGTTTGCATTTTTGGATGGGTCAGATACATCA ATCCATAAAAACTTATTTAATGGATGGACTTGTCAATTTTACTAACTGGGTCATGGATGAATTGAACTTTTTCACAGATT CTTTATTCTTAACCGATCATGAATGAACTAATGATTTGTTTTTGGTCAATCGATTATAAGGCGATTCATAATTTATCTAA ATCATCTGTTTTACCCCCCGTCCTTTATTAGAAGTAGATGCTTTTCCCCTCCATTACTATCTCTGATCTATTCATGTCTC AATCATTACCCATATATTTTGAAATTTTCAGTAGTTAAAGAACATAAGTGATAGAGTCAGGAATTTGTTACTCTGTTGAT TTAAATTTAAATTAAATTTTTTTACACTGGACAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAGATCGCTGCTC AGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGCTCTTTTCAAGCAGAGAAAACACTTCTTCTACAACTGATAAG TATTCCACTATTGTTGTTAAAAAGGCAGAAGGTACTTCAATGTCTTATGTTTGGTTATTTTAAATAGCTCTGTGTTCTGT CTGATTGTTTTGATGACAACCCTTGTACTATTAAACATGATCAACCCAACTCATCTACTCATACTTTAACATGATAGCAT TATAAATAAAAAATATGATATATCATCTGCCGTTTAGAATCAACCATCAGAAATATTTATACCTATAGACATAATGATTT TTAACTCATTGATTTATAAAATATTTATACCTATAGTTTATTTTAAATATTATTTATTATTATATAACTAAAAGTCTAAA AGGTTTCTGATAGGGTCAAGAGGATGCAGAAACCTCCTATCAGTAAAGTCTATGTCAGACGCAATAAGGGGAATTAGCTT AATAAGGGGAATTAGCTTAATAAAGGGGAATTAGCTTAATAAACCTTGTGGTTAGGGAAACTATAAATAAGAACCTATGG TTCATAGTTAGTAAGCTTTTGCATATTGTTAGGTTGTGATAACTGAATCAGGGGATTCAGTTGAGCTTCTCTGTTTCTGT TATCTTCTTCTTTCTCAGTGTCCATCTTCTACCAAGCTTTCACATTCAGATATTGATTCAGTTCTGCATTTTTCTGTGGA GTTTTCTGCTACAGTTGTTAGTCTTTTATTTTCCAGTGCTATCAGTTTCAAATGTAAACTAGGGGTATTTTGTTAGTCTA AATTTTTGTAATGGTGTTCAGTATTCTGTTCTCCTTGGTTCCTCCCTTTTCGATGAACCAAATTGTACCATTCTAAGAGC CTTATGTTCTGTTCTGTTCCGTCTTACAAATATAACAAACATGGAATAGAACCCTGTGTCCCGTTCTGATCTGTCTACCA AAAAACACTACCATAGTTTTGTTATGCATCATTCCAGTTCGCACTTCACATCTTTCTCTAACTTTTTTATCAGCAACAAA TAACTAACATAAAAGGGAGTACAAGGGGTACTCTAAGTCTCTAACCCTTACACCAGTCAAGAACCAGAAACTTCAGCTCA CAAACCAAGCATGAAGCCAAACAACGGGGAGACAATTACAAGGAGATAGAAGTTAAAGGATTCTTAGACCACGTAAAATA ATGAGCATGCTGAGGCAAAATTTCTGCTGCTGTTAACCATCACCATGGTATCAATTTAATCCTTTCCAATTGTTCAGCCA CATCAGGCCTCACATTCCTAAAACATGCACAGTTTCTGGCACTCCAAACTTCCCAAAACACTGCATAAACAACATAGATC CAGGCTTCATTCAATCTTCTATTGTCCAGCATGCATTGATTGACAGTACCAAAATAAATCCCCGCAAGAATTTGGAGCTG CTGTACTAATTCCCCACCAACCAAAACAAGCATACCATGTTTGAGATAGATTAAGTTTTCTATTTTCTGTCTTGTAAATA TTCCTGCAGTTTTAAGCTTCCAAATGCCGTTTCTTATGAATTGGCATGCCAAGAGTTAAAACATTCTAATGTTAATCATT GCTTTAACAATGTTTCAATGTATAGTTACTTTTTTTATCAATATAAAATTGAAATTTAATTAGTAAGGAAGAAGGAATAC AAAAACAAGGATACATATCCTTCTCAAACAAAACAAAATAATACTGAAGTACTCTTCCATCTGTTAGCAGTCTTGTAAGG AGGTTCTCTGTAAAAGGCAAAAAAACCGTGTGATGAGCACCGCGGTTGTAACAATTTAATCCTGTCCCATGGTAGTTTAA GGACCAATTTCCTCATGAAAACCGGACCATATTGCACTTGCACCTACCAAATATACCAGAGAATGACCAGGCATGATGCA CTCCCATAGAAGTTTCTTTCTTGACTGCTGCCAAAACTTATAACATTCTATCAACAAGGTTCACCAAGTCCATGAAAACC CTACTCCCCATGTAATTGGCTTCTAGGCTAAGTAAAAAAGAAGTTCACGGTTGTTTCTATGTGAAATATGAACAATTTAA CATGTTAGCAATTGTCCATCTATGTATTGCTATGCCACCCTATGATTGCACTTGGACCCTTTTCCTCATACTGCCTACCA ATGGGTGTGTTGTTTAATCGTGTGGTACATGCTCTTAACCCCTGATGTTCTGCCATTTGTTTGATTCCTAGAACCTACAC AACAGTTAAAACTGAACAAGGAATTCTGACAATGTATATTCAATTATCCCTATTGTTAACTGTTCAAAAGGGGAGCCTTG CCGCCACGGTTAAAGGTTTCTGCCATGTGACTAAGGTCTGGGAAACAGTCTCTTGTGTAAAAAACAGGGTAATGCTGCTT AGAATAGACCATGTGGTCGAACCCTTCCCCGGACCCCGCGCATAGCTGGAGCTTTAATGCACCGGGCTGCCCTTTCTTTC CTCTTGTTAACTGTTCTACATGCACTGAACTGAATGATACAAAATTGTATCACCTATTATCCCCTTGATCTGTTATTAGT AGCCAATAAATAGACATTTTTTTTTTCAAATGCATGTGGTGTGAGTGTTGAGTACAAAAATTCCTATTTCAGTATTTTTC CTGTCATATCTTGATTTTTAATTTTCCTAATGCTAGAAGATCGTATAGGCATTATTGGTGGTCATGTAACTGCTGCTTCA GAAAATTCAACTGGAAAATCACTTCAAACTACTGCTAGATCCCGCCCACCTATTACCACTCATGTGTTGGATGTTTCGCG AGGCTGTCCCGCTGCTGGTATGGAAGTACTTTTGGAGGTGTGGAGAGGCAGTCAGTCTCGACCAACATTTGGGGCCGCCG GCGGTGGCAGTTGGGTGGTTCTAGGGTCATCTACAACAGATTTAGATGGTCGGAGTGGTCAGCTGTTGAGCATCGTGGAC GATGCGAATCCAGGGGTATACAGGATAAGTTTTAACACCGGGAAGTACAACCCAAGCGGTTTCTTTCCTCATGTGTCTAT TGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTTCATGTTCCTCTGTTGCTTTCACCATTTTCATTCAGCACTT ACCGTGGAAGCTAG
CDS sequence (LotjaGi3g1v0260800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAGTTTGGGTTTGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGAGACG TTATACAAACAGGCCAATTGTTGAATTTGAGATCGCTGCTCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGC TCTTTTCAAGCAGAGAAAACACTTCTTCTACAACTGATAAGTATTCCACTATTGTTGTTAAAAAGGCAGAAGAAGATCGT ATAGGCATTATTGGTGGTCATGTAACTGCTGCTTCAGAAAATTCAACTGGAAAATCACTTCAAACTACTGCTAGATCCCG CCCACCTATTACCACTCATGTGTTGGATGTTTCGCGAGGCTGTCCCGCTGCTGGTATGGAAGTACTTTTGGAGGTGTGGA GAGGCAGTCAGTCTCGACCAACATTTGGGGCCGCCGGCGGTGGCAGTTGGGTGGTTCTAGGGTCATCTACAACAGATTTA GATGGTCGGAGTGGTCAGCTGTTGAGCATCGTGGACGATGCGAATCCAGGGGTATACAGGATAAGTTTTAACACCGGGAA GTACAACCCAAGCGGTTTCTTTCCTCATGTGTCTATTGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTTCATG TTCCTCTGTTGCTTTCACCATTTTCATTCAGCACTTACCGTGGAAGCTAG
Protein sequence (LotjaGi3g1v0260800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKFGFVFLICASGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITELRLAKLFSSRENTSSTTDKYSTIVVKKAEEDR IGIIGGHVTAASENSTGKSLQTTARSRPPITTHVLDVSRGCPAAGMEVLLEVWRGSQSRPTFGAAGGGSWVVLGSSTTDL DGRSGQLLSIVDDANPGVYRISFNTGKYNPSGFFPHVSIVFEILESQKKQHFHVPLLLSPFSFSTYRGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | - | – | |
| Gene3D | 1 | 58 | 58 | 4.1E-23 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Pfam | 2 | 52 | 51 | 1.1E-11 | ||
| SUPERFAMILY | 2 | 56 | 55 | 7.32E-18 | ||
| Phobius | 4 | 11 | 8 | - | – | |
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 229 | 213 | - | – | |
| PANTHER | 67 | 229 | 163 | 2.2E-50 | – | |
| PANTHER | 67 | 229 | 163 | 2.2E-50 | ||
| Gene3D | 97 | 228 | 132 | 1.5E-35 | ||
| SUPERFAMILY | 103 | 229 | 127 | 1.7E-32 | ||
| CDD | 108 | 229 | 122 | 1.24915E-47 | – | |
| PRINTS | 109 | 129 | 21 | 2.4E-8 | ||
| TIGRFAM | 109 | 229 | 121 | 1.6E-27 | ||
| Pfam | 110 | 228 | 119 | 3.7E-31 | ||
| ProSitePatterns | 113 | 128 | 16 | - | ||
| PRINTS | 207 | 229 | 23 | 2.4E-8 | ||
| ProSitePatterns | 212 | 224 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Purine nucleobase metabolic process | The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Molecular function | Hydroxyisourate hydrolase activity | Catalysis of the reaction: 5-hydroxyisourate + H(2)O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+). |
Expression pattern of LotjaGi3g1v0260800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…