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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0260800 |
| Transcript ID | LotjaGi3g1v0260800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transthyretin-like S-allantoin synthase protein; TAIR: AT5G58220.1 transthyretin-like protein; Swiss-Prot: sp|Q9LVM5|TTHL_ARATH Uric acid degradation bifunctional protein TTL; TrEMBL-Plants: tr|A0A151QU94|A0A151QU94_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0260800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:47617178..47623514) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAACTGGGTTTTGACGAGAAGGACTATTTATCATGCTGTGGAAGCACCATATTCGCCAAGGAAATGGCTTCAGCCTC TCCTTTCTCTTCCTTTCAGCACGCCATTTCCATTGCCAGAGACATTTGGTTCAACAGCGTTGATGTCAATGGTTGGCTTC AAGCTTTCTCTGCTCACCCTCAGATTGGTCAAACCCATGCTCCCTCTCACGCCTCGGAAACCAGTGCTCAGTTCAGTAAT GAATCCCCACTCTTTTTCCCCATCTGGGTCTATTTGTTTTTTGGTTATTGATATGAAAACTCATGACTTTAGTGCTTATG TTTTGATTTTTTTTGAAGGGTTTGTTTTTGTTTTTGTCTCTTCATTTGGAATTTTCAGATAGTAATGGAAATTGTCTGTT CAGTGGTTCCTCCCATTCTGTTCTTGTTTAGATTGATGTGAGGAACTTGAATGAGTACTGAGATGGTGTTTGCTTGTGTT TTAATTTTGGATTTTTATGATAGTAATTGAGTTTGTCCTGCTTACATTTTACATTGATGTGAAAAACTTGAATGTGCAAT TAGGTTGTGGTAAAAAGCTTCAACCATTGTTCACTTGTTAGCACTAGTAACTTCTTTTCCAAACTGCTTTTGGCAGGTGG AGTAAGGGAGAACAATCAACTGCATTAGCAACTGCTACTGGTTCTAGCTCACAGGTTTGCTTGCTGCTGCCCTTAAATAA ACTTGAAATACTTTAATGCTATTTGCTGTTGTATGAAATATGCCGAAACTGATTGATCTCTGGATCTGCTATCAGAATAC TTTAGATAATTTGTATAAGGGTATTGAATTGAAATAGCACTACCTTTGAGAGAGTTCAACTTTCTTACTAGGTAGTGCAT ATGGTTTCAATTTTGGATCCTTCATTTGCTGGTCCTACGTTATGGTGTACTTTATTATTATCATGGAGGAACTATTTGTC CATCTGAATAACTGGGCATGGGATGAGGCAACAAACATGAGGTTCTGGCTTTCTGGGGGCACTTCAACTTCTATGTTAAC TGTTCATAAATGAAAGTTAGTGATTTATATGCTCTCCATCTAACTTTTGTAGGAACTATCCGAATGGAATGCTCGATATA TGCAGAAGTTTGGGTTTGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGGTAAAT TTGAACTTATAGTCTAGTGTTGGCAAATGTTTTATTTATGGTCTTTGTAGGTGACAATGTACATCTATTTCTTATTCAAA GATAAAAAAACTGCATTGATTAGTTTTAGAGGATTGAGCTGGTGAGAGTTTTGGTATTTTTTCTTTTTATCTTAAAAACA TTTCAAATGATAATACGGGTGACATTTTTGGATTTGAAATACTAACCAGTAGTAATTTCTGGAACCTTTCTTGGTGACAT TGTTTTGATGGATAAATGAATGACTAATATATTTTCATAGAAGAGTACTTCATGATGTCAACAATTAGTGCATATGGTTC AAAATGGACGCCGCACCAACAGAGTGTGAAATTCTACAAGTTGCTAGAAGTTTTTTTGTCTTGAAAATACCTCTTATAGA AAAGGGTGTACAACGAGTGATTTGGAAATTTTGGATAAACTTATTCTTTGGTCATCGATCACCCATGATCAATATGTGGT GCTAACTGCTCATATTATGTTACTTAAATTAGAGTTAAAGAAGAAAGTGTTGACTTTCTTCCATATTCTACCACCTCTTA TGGTGCTAATTTAGCTAAGAAGTTTCCGAATATCTTAAAAGAGTGAAGTTTAGATATAAAAAAAATCACTCTTACTTTAC GATGTGTCTTAGAATGACAGCATGGTAAATTAGTTGTTAATAGAGATTATTTACATTAGGTGTGATGCATATATTTTAAA CTTGATTGTTTAAGAATGTTTGAAAGTAATAGATGATGCTTTGACTAAAATCCAAAAAATTGTGGAATACATTAGTGGAT AGATGCACAAGAAATGAAGTTTGTATCACCACTATCATGTTTAGAGCTATTCTCCCATGTAGTTTCTAAGCAACTTGGTC AAGATGTGCCCATAAAATGGAACACCATATTATTTTTTTGTACGAGGGTGCTATAGGTTTTCAAGAAGTCTTTGTACTAA GAAATATAGATCCCTTTTTTTTAGTTGTTTGTTTATCACAAGAGGAGTGGGTTCAAGGAATAATAGAGTGCTTAAAGTCT TTTTATGATATCACCCCTCGTTTTTCATACAATAATTTTGCAACTGACAATTTATATTTTTATGGTATATGTAGGACAAT GTAAATAGGATAGACCCACCATTAGAATACATTGCAAGTCTAATGCCATAACAACAATGGCCCTAGTTATGATAATGTGT GAGCCTGTGAGGTTGTTACAGTCTTCTTATTTCGAACATTTGTGGGATGGATATTTTGATACATTCAAACTACTCAAATT CTTCACTACAAATGAAGAAAACTAAACAAGGTTGTATAAATATGAGAGAGAGAATTGTATAGAGATAAAACATTGAGGAG AAATTATGGAGTTAAAAAAGGGTAGAGAAATAGTTTTTTGGATGGGTTGGATATAAAAGGGCAAACCTGGTGCAATAAAG CTCCCTTTATGTGCGAGATACGATCAGAGGCCGCATCCACGTAGGCAACCTTACCTTGCATTTTTTGCAAGAGGTTGATT CCAAGGCTCGAAGCTGTGTCTGCAAAGTCAGCAACCTTACCGTTTTAGCGAGGTTTGCATTTTTGGATGGGTCAGATACA TCAATCCATAAAAACTTATTTAATGGATGGACTTGTCAATTTTACTAACTGGGTCATGGATGAATTGAACTTTTTCACAG ATTCTTTATTCTTAACCGATCATGAATGAACTAATGATTTGTTTTTGGTCAATCGATTATAAGGCGATTCATAATTTATC TAAATCATCTGTTTTACCCCCCGTCCTTTATTAGAAGTAGATGCTTTTCCCCTCCATTACTATCTCTGATCTATTCATGT CTCAATCATTACCCATATATTTTGAAATTTTCAGTAGTTAAAGAACATAAGTGATAGAGTCAGGAATTTGTTACTCTGTT GATTTAAATTTAAATTAAATTTTTTTACACTGGACAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAGATCGCTG CTCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGCTCTTTTCAAGCAGAGAAAACACTTCTTCTACAACTGAT AAGTATTCCACTATTGTTGTTAAAAAGGCAGAAGGTACTTCAATGTCTTATGTTTGGTTATTTTAAATAGCTCTGTGTTC TGTCTGATTGTTTTGATGACAACCCTTGTACTATTAAACATGATCAACCCAACTCATCTACTCATACTTTAACATGATAG CATTATAAATAAAAAATATGATATATCATCTGCCGTTTAGAATCAACCATCAGAAATATTTATACCTATAGACATAATGA TTTTTAACTCATTGATTTATAAAATATTTATACCTATAGTTTATTTTAAATATTATTTATTATTATATAACTAAAAGTCT AAAAGGTTTCTGATAGGGTCAAGAGGATGCAGAAACCTCCTATCAGTAAAGTCTATGTCAGACGCAATAAGGGGAATTAG CTTAATAAGGGGAATTAGCTTAATAAAGGGGAATTAGCTTAATAAACCTTGTGGTTAGGGAAACTATAAATAAGAACCTA TGGTTCATAGTTAGTAAGCTTTTGCATATTGTTAGGTTGTGATAACTGAATCAGGGGATTCAGTTGAGCTTCTCTGTTTC TGTTATCTTCTTCTTTCTCAGTGTCCATCTTCTACCAAGCTTTCACATTCAGATATTGATTCAGTTCTGCATTTTTCTGT GGAGTTTTCTGCTACAGTTGTTAGTCTTTTATTTTCCAGTGCTATCAGTTTCAAATGTAAACTAGGGGTATTTTGTTAGT CTAAATTTTTGTAATGGTGTTCAGTATTCTGTTCTCCTTGGTTCCTCCCTTTTCGATGAACCAAATTGTACCATTCTAAG AGCCTTATGTTCTGTTCTGTTCCGTCTTACAAATATAACAAACATGGAATAGAACCCTGTGTCCCGTTCTGATCTGTCTA CCAAAAAACACTACCATAGTTTTGTTATGCATCATTCCAGTTCGCACTTCACATCTTTCTCTAACTTTTTTATCAGCAAC AAATAACTAACATAAAAGGGAGTACAAGGGGTACTCTAAGTCTCTAACCCTTACACCAGTCAAGAACCAGAAACTTCAGC TCACAAACCAAGCATGAAGCCAAACAACGGGGAGACAATTACAAGGAGATAGAAGTTAAAGGATTCTTAGACCACGTAAA ATAATGAGCATGCTGAGGCAAAATTTCTGCTGCTGTTAACCATCACCATGGTATCAATTTAATCCTTTCCAATTGTTCAG CCACATCAGGCCTCACATTCCTAAAACATGCACAGTTTCTGGCACTCCAAACTTCCCAAAACACTGCATAAACAACATAG ATCCAGGCTTCATTCAATCTTCTATTGTCCAGCATGCATTGATTGACAGTACCAAAATAAATCCCCGCAAGAATTTGGAG CTGCTGTACTAATTCCCCACCAACCAAAACAAGCATACCATGTTTGAGATAGATTAAGTTTTCTATTTTCTGTCTTGTAA ATATTCCTGCAGTTTTAAGCTTCCAAATGCCGTTTCTTATGAATTGGCATGCCAAGAGTTAAAACATTCTAATGTTAATC ATTGCTTTAACAATGTTTCAATGTATAGTTACTTTTTTTATCAATATAAAATTGAAATTTAATTAGTAAGGAAGAAGGAA TACAAAAACAAGGATACATATCCTTCTCAAACAAAACAAAATAATACTGAAGTACTCTTCCATCTGTTAGCAGTCTTGTA AGGAGGTTCTCTGTAAAAGGCAAAAAAACCGTGTGATGAGCACCGCGGTTGTAACAATTTAATCCTGTCCCATGGTAGTT TAAGGACCAATTTCCTCATGAAAACCGGACCATATTGCACTTGCACCTACCAAATATACCAGAGAATGACCAGGCATGAT GCACTCCCATAGAAGTTTCTTTCTTGACTGCTGCCAAAACTTATAACATTCTATCAACAAGGTTCACCAAGTCCATGAAA ACCCTACTCCCCATGTAATTGGCTTCTAGGCTAAGTAAAAAAGAAGTTCACGGTTGTTTCTATGTGAAATATGAACAATT TAACATGTTAGCAATTGTCCATCTATGTATTGCTATGCCACCCTATGATTGCACTTGGACCCTTTTCCTCATACTGCCTA CCAATGGGTGTGTTGTTTAATCGTGTGGTACATGCTCTTAACCCCTGATGTTCTGCCATTTGTTTGATTCCTAGAACCTA CACAACAGTTAAAACTGAACAAGGAATTCTGACAATGTATATTCAATTATCCCTATTGTTAACTGTTCAAAAGGGGAGCC TTGCCGCCACGGTTAAAGGTTTCTGCCATGTGACTAAGGTCTGGGAAACAGTCTCTTGTGTAAAAAACAGGGTAATGCTG CTTAGAATAGACCATGTGGTCGAACCCTTCCCCGGACCCCGCGCATAGCTGGAGCTTTAATGCACCGGGCTGCCCTTTCT TTCCTCTTGTTAACTGTTCTACATGCACTGAACTGAATGATACAAAATTGTATCACCTATTATCCCCTTGATCTGTTATT AGTAGCCAATAAATAGACATTTTTTTTTTCAAATGCATGTGGTGTGAGTGTTGAGTACAAAAATTCCTATTTCAGTATTT TTCCTGTCATATCTTGATTTTTAATTTTCCTAATGCTAGAAGATCGTATAGGCATTATTGGTGGTCATGTAACTGCTGCT TCAGAAAATTCAACTGGAAAATCACTTCAAACTACTGCTAGATCCCGCCCACCTATTACCACTCATGTGTTGGATGTTTC GCGAGGCTGTCCCGCTGCTGGTATGGAAGTACTTTTGGAGGTGTGGAGAGGCAGTCAGTCTCGACCAACATTTGGGGCCG CCGGCGGTGGCAGTTGGGTGGTTCTAGGGTCATCTACAACAGATTTAGATGGTCGGAGTGGTCAGCTGTTGAGCATCGTG GACGATGCGAATCCAGGGGTATACAGGATAAGTTTTAACACCGGGAAGTACAACCCAAGCGGTTTCTTTCCTCATGTGTC TATTGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTTCATGTTCCTCTGTTGCTTTCACCATTTTCATTCAGCA CTTACCGTGGAAGCTAG
CDS sequence (LotjaGi3g1v0260800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAGTTTGGGTTTGTGTTTCTCATATGTGCATCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGAGACG TTATACAAACAGGCCAATTGTTGAATTTGAGATCGCTGCTCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGC TCTTTTCAAGCAGAGAAAACACTTCTTCTACAACTGATAAGTATTCCACTATTGTTGTTAAAAAGGCAGAAGAAGATCGT ATAGGCATTATTGGTGGTCATGTAACTGCTGCTTCAGAAAATTCAACTGGAAAATCACTTCAAACTACTGCTAGATCCCG CCCACCTATTACCACTCATGTGTTGGATGTTTCGCGAGGCTGTCCCGCTGCTGGTATGGAAGTACTTTTGGAGGTGTGGA GAGGCAGTCAGTCTCGACCAACATTTGGGGCCGCCGGCGGTGGCAGTTGGGTGGTTCTAGGGTCATCTACAACAGATTTA GATGGTCGGAGTGGTCAGCTGTTGAGCATCGTGGACGATGCGAATCCAGGGGTATACAGGATAAGTTTTAACACCGGGAA GTACAACCCAAGCGGTTTCTTTCCTCATGTGTCTATTGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTTCATG TTCCTCTGTTGCTTTCACCATTTTCATTCAGCACTTACCGTGGAAGCTAG
Protein sequence (LotjaGi3g1v0260800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKFGFVFLICASGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITELRLAKLFSSRENTSSTTDKYSTIVVKKAEEDR IGIIGGHVTAASENSTGKSLQTTARSRPPITTHVLDVSRGCPAAGMEVLLEVWRGSQSRPTFGAAGGGSWVVLGSSTTDL DGRSGQLLSIVDDANPGVYRISFNTGKYNPSGFFPHVSIVFEILESQKKQHFHVPLLLSPFSFSTYRGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | - | – | |
| Gene3D | 1 | 58 | 58 | 4.1E-23 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Pfam | 2 | 52 | 51 | 1.1E-11 | ||
| SUPERFAMILY | 2 | 56 | 55 | 7.32E-18 | ||
| Phobius | 4 | 11 | 8 | - | – | |
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 229 | 213 | - | – | |
| PANTHER | 67 | 229 | 163 | 2.2E-50 | – | |
| PANTHER | 67 | 229 | 163 | 2.2E-50 | ||
| Gene3D | 97 | 228 | 132 | 1.5E-35 | ||
| SUPERFAMILY | 103 | 229 | 127 | 1.7E-32 | ||
| CDD | 108 | 229 | 122 | 1.24915E-47 | – | |
| PRINTS | 109 | 129 | 21 | 2.4E-8 | ||
| TIGRFAM | 109 | 229 | 121 | 1.6E-27 | ||
| Pfam | 110 | 228 | 119 | 3.7E-31 | ||
| ProSitePatterns | 113 | 128 | 16 | - | ||
| PRINTS | 207 | 229 | 23 | 2.4E-8 | ||
| ProSitePatterns | 212 | 224 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Purine nucleobase metabolic process | The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Molecular function | Hydroxyisourate hydrolase activity | Catalysis of the reaction: 5-hydroxyisourate + H(2)O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+). |
Expression pattern of LotjaGi3g1v0260800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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