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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0282800 |
| Transcript ID | LotjaGi3g1v0282800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp|Q94B55|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr|A0A0L9UNF0|A0A0L9UNF0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0282800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:56814312..56818294) extracted from Lotus japonicus Gifu genome v1.2.
GTGAATGTAAACTTTGTATTCATCATTACTTATATGTTAAATATATATGGGGGCAGAGAAACCAATCTTTAGGTGGAATC TAATTCATCTAATTGCTGCCCGAAGTCATTCTCTTTTTGAAGTCATTCTGAGTAAACTGCTATTCACTGACACGGTGAGC TACCATCTCTACCCCTCACTCTTCACTTGATTCCTTTCCTATTAATCAATTCAATCTTCTCTCACAAAACACAACACACA GTTACAATTTCCAATTCCATTTCTTAAAAACACAAAAATCTTATATATTTATAAATCATAAGCCAATAACACTCACTCAC CAATCGAAGACACCAAACCTGGTGGCGCAGCCAAAAGCAGAGAGGTGAAGTTCAACAAACCACTTCACCTCTCCCACCAC CACCACCACCACCACCACCACCATAATGGGTCAGGGTCTCAGTTGCAGAGGCAACCATGACCATGGTCTCTTCACTGCTG TGCAACAAGGTGACCTTCAAATTGTTACAGCTCTCTTGGAACAAGACCCAACTCTCTTCCACCAAACCACTCTCTATGAT CGCCACTCTGCTCTTCATATTGCTGCTGCCAATGGCCAGATCGAGGTACCCTTTTTCCCATTAATTCGTTTTGTTGTGAA AACTCTCCAGCTTTCACTCCCTGATGCGTTCAGTTCACGCTGATTCAGTTTCACAATTGGATACCCATTTACCCATTTCA CATTTGTTTCTGTTTGCAGATTCTTTCAAGGCTTTTAGATGGATCTGTTAACCCAGATATTTTGAATCGCCAGAAGCAGG TAAATTGTAGCTATGTTTCTCCATTTTGCATTGTTTTTATAGCGCGTGTCATTTTGCTTTTTTTTTTTGTTCTTTCCATT TCTAGAATGCTATATTCGCTTACCCTTCATTCATTGCGTTTTGTGAATCTTTCAGACTCCGCTTATGTTGGCAGCAATGC ACGGAAGGGTTGCCTGTGTGGAGAAGCTCCTTGAAGCGGGTGCTAATGTAATGTTTTCATTGCAGTCTCATTCTGAGTTG CCACCCTTTAATAACATGTTTGGATCAACTTCAATTTTCTCATAATCAATTTTGTCACCGGAAGCTACTTGCATAAATTT GTACACATAATTGGTTTTCGGTTCATTATCAATTATATAAGAATTTTCAAACATGCAGTTAATTATTGATGAATTTAGGA AACTGATGTATGCAATTCTCAGGTGTTGATGTTTGATACCCTAAACGGAAGAACCTGCTTACATTATGCAGCCTACTATG GCCATTCTTCTTGCCTCAAGGCAATTCTCTCTGCCGCTAAATCTAGTTCGGTGGCTGTTTCTTGGTTTGTCCTTTTTTCT GTTTTAATATCAATTTCTCTCCAATTACTGGTATTTTTGTTGTTGTTGTTTTTAATATTTTTGGATTCATTGCAGGGGAT TTGTTCGGTTTGTGAATATTAGAGATGGAAAGGGCGCAACGCCTTTACATTTGGCAGCTCGCCAAAGACGGCCAGAATGT GTGCATATTTTACTGGACAGTGGAGCTCTTGTTTGTGCTGCAACCGGTGGATATGGGTATTGATCTGTCAAAGTTCTCTG GTGATTGGCTTCAATCTGAGGTGTTTTTTTTCTTCCGTTTTGTGGATTAATCAATTGCTATTTGCAGGTGTCCTGGGAGC ACTCCCCTTCATCTAGCTGCTAGAGGAGGATCTCTGGATTGCATTCGTGAACTGTTGGCATGGGGTGCGGATCGTCTTCA ACGCGATGCATCTGGGTATGTTTTTATTTCTCAACACAGATTCTTGCCATTTTGATAAGGGCTCATTGGGTTTGGGACTT AAATTACATATCTATACACATTCCATCTTAATTTATGTGGCTAATTTTGTTACATATTGGTTAGTTATCTTAGTCAATGT TTGGAAATCATTTTACAATTGATTTTGAGGCTAAAACTAGTTCCAGGGTAAACTTATGTGAGTAGCTTTTGGGTGTTAAA ATTCATTATGAGGAAAGAGAAGCTGATCTAAACTAATATGCAATTGAAATATTACAATTTTTTGAAGTAATTAGGAAAAT CTTTTTTCTGATTAATCATGATTACATCACTTGTTTTGAGGGGCCCTCCTCCTGTACTAATGTCCTCTCTTTTCTGGCAT TTACCTGTTGTAATTTCTCAACTTTTGGGAGCAACTTACCTCATGTCACAATTTGGCCATCTGTTAGTGAAATGGATTCA TAGTATTTAACCAGGCTACATTTCCCCGTCATCAATTCTCACAATCCCTGAGGTTGTCTTCATGCTATTTGGCGTTTTTA TGCAGGCGGATACCGTATATGGTTGCTCTGAAACACAAACATGGAGCAGCATGTGTGTCCTTGCTAAACCCTGCGTCGGC AGAGCCTCTTGTCTGGCCATCTCCATTGAAGTTCATTAGTGAGCTTAATCTGGAAGCCAAAGCTTTATTAGAACAGGCCC TAATGGACTCAAACAAAGAAAGGGAGAAAAACATATTGAAAGGGAGTGCTTACACTCTTCCATCTCCATCACATTCTGAT GGGGTAGATGACAATATCTCTGAGGTAATCTAACACCCTCTACATTTAAATACACCAACTTCTTGTGTTTTGTAATTCAA TTGAATCAGGGCATTTAAATACCTTAGAATTCAGTAGAGTTATAGTTGGAATTCTGAAGTTGAATCAATTTGAAATGCTA CAACATTTTAAACCTCATATTGAGTTTATATTCCGAATTTAGTGCTATTGAAATTAGTAAACTCATTGTTTATTGTTGGG TGTCACATTATGCAGATTAGTGAGTCTGAATTGTGCTGCATCTGCTTTGAGCAAGTTTGCACAATTGAAGTTCAGAGCTG TGGTCACCAAATGTGTGCACAATGCACACTAGCCCTATGTTGCCACAACAAGCCTAACCCTGCCACTGCGTGTATTAACC CCCCAGTTTGTCCATTTTGCCGAAGCGCCATAGCGAGACTGGTGGTTGTGAAGGTAGAAAGCGCTTATTATGATGAAGGT GATCAAGATAATAACGTTGATATGATGAATTGTTCCAAGATTAGCAAGTCAAGGAAACCGAGAAACATGAATGACTGTGG TGGTAGTAGCAGCTTCAAGGGATTAACATTCGGGAAATTGGGCGGCCGAAGCTCTGGAAGGATTGCTGCAGAGTGGGTGG ATAAATTAGAGTGATGGATTAATCCTGCTTGTTAATCAATGATTCCATGTTGGTAAAGCACGGTAAGTAAGTGCTTAATG GCCAAGGCAAAATCAAAGTTAAAAAGTGGAGGAATAGGAATATTGTGTAATTTTGAGAAATAAGCAAAGGGATCAAGTTG AAGTGAAGTTCAAGTGTTGGTGGGGTGAAAAGAGGAGGGGATGTTGCGATGTTGTTGTAGCATATTATTATTACTTGAGA TTGAAGAAGCTAGCATCACCTCATGTGTAGATGATTTTGGGCAACCCTCAATAATAAATATTCTTGTACGTAAGTTAGTA AAGTGAGGAATAATTTCTCTCTAATGTGCATAAGTCAATGTCATGGGAAAAATGTATTGCTTAATTATTTGCATCTGGTT TATTTGTTTGTAACTTTGTACTGATATACGATGTGAGCAATAAATACAAAAGCGAAAGACAGGGCTTGCTGTTGCTTGTC ATATGGTCATGTCTCCTTGGTAGTTTATTATGCGCACTCAAGATGATCCTTGGACACTGATGCACGATTTTGTTTGGATA TCAGTTAAATGTAATAAATTTTTACGTTGATTCAATAGAACTTTGTTCATTTTTTACCATGAAGTATTTGCTAACGTCAA TTTGTTTACACATAGTGCCAAGGGATAACCTAAGCCTAAAGCTATATGTTTAGATATTTGTCAATATTCGTGTGAAGTTA ACAAAGTAAAGTTTTACTTCTTCATTAGTGCATTAAAACGTGCATTTTTTTCTATTTGCGAGG
CDS sequence (LotjaGi3g1v0282800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCAGGGTCTCAGTTGCAGAGGCAACCATGACCATGGTCTCTTCACTGCTGTGCAACAAGGTGACCTTCAAATTGT TACAGCTCTCTTGGAACAAGACCCAACTCTCTTCCACCAAACCACTCTCTATGATCGCCACTCTGCTCTTCATATTGCTG CTGCCAATGGCCAGATCGAGATTCTTTCAAGGCTTTTAGATGGATCTGTTAACCCAGATATTTTGAATCGCCAGAAGCAG ACTCCGCTTATGTTGGCAGCAATGCACGGAAGGGTTGCCTGTGTGGAGAAGCTCCTTGAAGCGGGTGCTAATGTGTTGAT GTTTGATACCCTAAACGGAAGAACCTGCTTACATTATGCAGCCTACTATGGCCATTCTTCTTGCCTCAAGGCAATTCTCT CTGCCGCTAAATCTAGTTCGGTGGCTGTTTCTTGGGGATTTGTTCGGTTTGTGAATATTAGAGATGGAAAGGGCGCAACG CCTTTACATTTGGCAGCTCGCCAAAGACGGCCAGAATGTGTGCATATTTTACTGGACAGTGGAGCTCTTGTTTGTGCTGC AACCGGTGGATATGGGTGTCCTGGGAGCACTCCCCTTCATCTAGCTGCTAGAGGAGGATCTCTGGATTGCATTCGTGAAC TGTTGGCATGGGGTGCGGATCGTCTTCAACGCGATGCATCTGGGCGGATACCGTATATGGTTGCTCTGAAACACAAACAT GGAGCAGCATGTGTGTCCTTGCTAAACCCTGCGTCGGCAGAGCCTCTTGTCTGGCCATCTCCATTGAAGTTCATTAGTGA GCTTAATCTGGAAGCCAAAGCTTTATTAGAACAGGCCCTAATGGACTCAAACAAAGAAAGGGAGAAAAACATATTGAAAG GGAGTGCTTACACTCTTCCATCTCCATCACATTCTGATGGGGTAGATGACAATATCTCTGAGATTAGTGAGTCTGAATTG TGCTGCATCTGCTTTGAGCAAGTTTGCACAATTGAAGTTCAGAGCTGTGGTCACCAAATGTGTGCACAATGCACACTAGC CCTATGTTGCCACAACAAGCCTAACCCTGCCACTGCGTGTATTAACCCCCCAGTTTGTCCATTTTGCCGAAGCGCCATAG CGAGACTGGTGGTTGTGAAGGTAGAAAGCGCTTATTATGATGAAGGTGATCAAGATAATAACGTTGATATGATGAATTGT TCCAAGATTAGCAAGTCAAGGAAACCGAGAAACATGAATGACTGTGGTGGTAGTAGCAGCTTCAAGGGATTAACATTCGG GAAATTGGGCGGCCGAAGCTCTGGAAGGATTGCTGCAGAGTGGGTGGATAAATTAGAGTGA
Protein sequence (LotjaGi3g1v0282800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQGLSCRGNHDHGLFTAVQQGDLQIVTALLEQDPTLFHQTTLYDRHSALHIAAANGQIEILSRLLDGSVNPDILNRQKQ TPLMLAAMHGRVACVEKLLEAGANVLMFDTLNGRTCLHYAAYYGHSSCLKAILSAAKSSSVAVSWGFVRFVNIRDGKGAT PLHLAARQRRPECVHILLDSGALVCAATGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDASGRIPYMVALKHKH GAACVSLLNPASAEPLVWPSPLKFISELNLEAKALLEQALMDSNKEREKNILKGSAYTLPSPSHSDGVDDNISEISESEL CCICFEQVCTIEVQSCGHQMCAQCTLALCCHNKPNPATACINPPVCPFCRSAIARLVVVKVESAYYDEGDQDNNVDMMNC SKISKSRKPRNMNDCGGSSSFKGLTFGKLGGRSSGRIAAEWVDKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 442 | 442 | 3.5E-248 | – | |
| PANTHER | 1 | 442 | 442 | 3.5E-248 | – | |
| Gene3D | 8 | 143 | 136 | 3.5E-30 | ||
| ProSiteProfiles | 10 | 248 | 239 | 47.27 | ||
| SMART | 10 | 39 | 30 | 330.0 | ||
| SUPERFAMILY | 14 | 244 | 231 | 3.94E-50 | ||
| Pfam | 15 | 109 | 95 | 2.3E-14 | ||
| ProSiteProfiles | 45 | 77 | 33 | 10.579 | ||
| SMART | 45 | 74 | 30 | 0.0015 | ||
| SMART | 78 | 107 | 30 | 1.0E-4 | ||
| ProSiteProfiles | 78 | 110 | 33 | 11.327 | ||
| SMART | 112 | 143 | 32 | 4.7E-4 | ||
| Pfam | 112 | 183 | 72 | 5.8E-11 | ||
| Gene3D | 144 | 304 | 161 | 2.7E-24 | ||
| ProSiteProfiles | 157 | 189 | 33 | 11.3 | ||
| SMART | 157 | 186 | 30 | 4.3E-4 | ||
| SMART | 194 | 223 | 30 | 0.12 | ||
| ProSiteProfiles | 194 | 226 | 33 | 12.476 | ||
| Pfam | 195 | 234 | 40 | 4.3E-7 | – | |
| Gene3D | 305 | 386 | 82 | 3.3E-6 | ||
| SUPERFAMILY | 316 | 374 | 59 | 2.72E-6 | – | |
| ProSiteProfiles | 321 | 370 | 50 | 9.185 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0282800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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