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LotjaGi3g1v0284000.1

Overview

Field Value
Gene ID LotjaGi3g1v0284000
Transcript ID LotjaGi3g1v0284000.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT2G28930.3 protein kinase 1B; Swiss-Prot: sp|P46573|PBL10_ARATH Probable serine/threonine-protein kinase PBL10; TrEMBL-Plants: tr|A0A0L9UNG1|A0A0L9UNG1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0284000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:57127388..57130701) extracted from Lotus japonicus Gifu genome v1.2.

CACCCACCTTCCTTTTGTATTAACTAACCCCGCATCCCCATCCACTATTTTCATTCATCCAAAAAAGGGTCCCTTTCTCT CTCTCTCTCTCTAATGGCTTTTCCTTACAATCCAGCACACCATAAGCAACTAATATAATAACTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCCCTCTTACTTACTGTTTAGACTCTGGATCACCATTGCAAAGTGTAAACAGGTTCTTCTTCGCCTTTTC CTTCATTCATATTTCCTTCATTCCATTTTCTCTCTCTGTATTCAGCTCAACTCACATGGTTTCTGCACATCTGCTAGATC TTTGTAACTGCCTCCACAACATGGGAGCTTGTTTGAGTGCTCAAATTAAAGCTGAAAGCCCCAATAACACTGGTATGTTC CACAATTTTCTTCCTCTTTGCAACAACTTCTTCAAGTTGGTGTGCTGTTTGCATCATTCATTTCAGCTTGTGCAGTTCTG CTTTCATATCAATTGCTATGTCCTGTGTGAGAAGTTAGATTTGGTGTAGTTTAAGCTCTGCTTCCAACTGTTTAGTGCGT TTGATTTGTTAATTGTACTCATTTCTGCTGGCTATGTTTGGTTTTTGGTGTAAAAATATATGAATTTGGGTATGTTTCCC AATTTTATCATGTTAACTGTTTTTTAACCCTGTTTTGATGCTAATTTTAAGTTCCATTTTTGGATAAAACAAAAATTTGT AGGCTCCCTTAGGTAGTAGTCTTAAGCATGATTCCAAAAATTTGTTCCATTACATTATATAAGCATAATTGAAGATCCAG TTGGGTAGTTCAGTGAATGTTATGTTTTGTTTTGATATTGATCAAAGTTTAACTGTAATGGATTTGGCCCGGTTTAGCAG GGTTAAGTTCGAAGAATGTGAGTACAAATGGAAATGATCTCAGCTGCGCAAACAGTAATGGTTTGGCTGCTTCAGTGGCT CAAACTCCGCGTAGTGAGGGTGAGATCTTGCAGTCATCTAATGTAAAGAGCTTTACCTTCATAGAACTTAAGACAGCCAC CAGAAACTTCCGTCCAGACAGTGTGTTGGGAGAAGGTGGGTTTGGATCAGTTTTCAAGGGGTGGATTGATGAAAATACAT TGGCTGCTGCCAAACCTGGCATTGGCATTGGTATTGCTGTGAAAAGGCTAAATCATGAAAGCTTCCAGGGTCACAGGGAG TGGTTGGTGAGTTTAATCCACTTCCTTAATTCATTTGCTCATACTTTTTAAGAAGCAAACTCTGCATCTGTCACTTAGTT TAGGCGAGGCATGGATAGTGATTTAAGATGCAAGTCTCATTTTGCCTTATTTATCTCTCCATGTTCTTCTAAGCTCACTG AATTATTTGACATCACCATATTCTACATCTGCTACAATTTTATTGGTACCAAATGAAATGATGATGATATTAAGTTAAGC TTGGAATACCTGGTGGTGCAGACAATTCATAGTTTCGCTTACTGTATTTCTGTTTTCACTTTAGGCTGAAGTCAACTATC TTGGACAGTTTTCTCATCCACATCTAGTGAAATTGATTGGGTATTGCCTTGAGGATGAACACCGCCTTCTCGTCTATGAA TTTATGCCTCGTGGGAGCTTGGAGAATCATTTGTTCAGGAGTGAGTTCTTCCTGTCCCTTCTTTTCACATAGTTTCAACT TTAGAAGTTTGTTTAACACTGTTAAAGTGACAATATTATTGTGACAGGAGGATCGTATTTTCAACCTCTTTCTTGGAGCC TCCGTGTGAAAGTTGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAACAAAAGTGATATATAGAGAT TTTAAGACTTCAAATGTCTTGCTGGATTCAGTATGTGGAATTCTGATATTTTTCTTTCAATGTATAATTACGGAAATAGG TTTAAACAATATCGAACGAGACTATGAAAGAAGTTATTTGCATAGCATATCTGAAACATATTTCTTGATTTGATCACAGA ACTATACTGCAAAGCTTTCTGATTTTGGGCTGGCAAAGGATGGTCCAACAGGTGACAAAAGTCATGTCTCCACCAGGGTA ATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTATTTTTAGTTTCATGTTACTGAACCATTTGTTTTT CCTTTGATGAGTTTTTAAGTTATGCTAGACTCAGCTTAGTAGCTTTCTGTTTAATGGCTAAAAACATTGTTATCGTAGGT CATCTTACTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTGGAAATGCTATCTGGTAAGAAGGCAGTGGACAA GAATAGACCATCTGGACAACACAACTTGGTGGAATGGGCTAAACCCTACCTGGCTAACAAGCGTAAGGTTTTCCGAGTGT TGGACAGCCGGCTCGAAGGGCAGTATTCAAGCGATGAGGCCTACAAGGTGGCCACCCTTGCTTTGCGCTGCCTATCAACC GAATCCAAGTTCAGGCCAAACATGGATGAAGTAGTTAAAGCTTTGGAGCAGCTGCAGGTTTCTAAAGTGAAAGGAGGCAA TCAAAATGCTTCTGCTAATGGAGCTCGAATGCGTAGAAAAAGTGCTGATGATGTTGGCCGTGTGAGGACCCTGTCATCTT ATCCCCGCCCCTCTGCATCCCCTCTCTATACAAACCTTCGAAGTTAACAAAGTTGAAAGTACATGAACTCAGGTATCTCT GTTGGTAAATAGACTTGTACATAGTATTCAGCTAGTATATTCAGAACCAAGCTTCTCTGTTGGCATTGCTGAGTGTGATT GCTAATGTCCTCAAATTTATATTGCACATATTCTGAGTTCTCTAAAGTGCTTGTAACAATCAAAACTAGCTGGGGAGGCT GGTACTTTTGCAGATTGCTCCGGTTAGATCATTTTTGTTCTATTCTATATCGGTGTGGTGCGGTTGCTTAATCTATTTTG TAAAACATCGTTGCCATATCGGGCTTCCACATCAAGCTTCAAACATGCGAAATACAATTAAAAGCTGATGGTTTATTCTA TGTGTTTCAATTCTTTCATGCTTTCTTTGTTGTGAACATGGACATGATCCTCTGGTTACAGAGGAAAACATTGGCTGTCT TTACATTATTTTAAAGAGAGATCAGTGGAAATTGTTTTGAAATATGACATTGATGCCAATGCTACAAACAATACTAATAG TATTTTCCATTTGGTGTTGGTGTGAATACATCAAAAAAAATTGAATTGTTTATTATTTATTAAATTTGATAATTATGTTA TCATTTTTATTTTATAAAGGATAAATTGGTAAAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0284000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGCTTGTTTGAGTGCTCAAATTAAAGCTGAAAGCCCCAATAACACTGGGTTAAGTTCGAAGAATGTGAGTACAAA TGGAAATGATCTCAGCTGCGCAAACAGTAATGGTTTGGCTGCTTCAGTGGCTCAAACTCCGCGTAGTGAGGGTGAGATCT TGCAGTCATCTAATGTAAAGAGCTTTACCTTCATAGAACTTAAGACAGCCACCAGAAACTTCCGTCCAGACAGTGTGTTG GGAGAAGGTGGGTTTGGATCAGTTTTCAAGGGGTGGATTGATGAAAATACATTGGCTGCTGCCAAACCTGGCATTGGCAT TGGTATTGCTGTGAAAAGGCTAAATCATGAAAGCTTCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGAC AGTTTTCTCATCCACATCTAGTGAAATTGATTGGGTATTGCCTTGAGGATGAACACCGCCTTCTCGTCTATGAATTTATG CCTCGTGGGAGCTTGGAGAATCATTTGTTCAGGAGAGGATCGTATTTTCAACCTCTTTCTTGGAGCCTCCGTGTGAAAGT TGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAACAAAAGTGATATATAGAGATTTTAAGACTTCAA ATGTCTTGCTGGATTCAAACTATACTGCAAAGCTTTCTGATTTTGGGCTGGCAAAGGATGGTCCAACAGGTGACAAAAGT CATGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTCATCTTACTGCTAAGAG TGATGTCTATAGTTTTGGAGTTGTCCTGCTGGAAATGCTATCTGGTAAGAAGGCAGTGGACAAGAATAGACCATCTGGAC AACACAACTTGGTGGAATGGGCTAAACCCTACCTGGCTAACAAGCGTAAGGTTTTCCGAGTGTTGGACAGCCGGCTCGAA GGGCAGTATTCAAGCGATGAGGCCTACAAGGTGGCCACCCTTGCTTTGCGCTGCCTATCAACCGAATCCAAGTTCAGGCC AAACATGGATGAAGTAGTTAAAGCTTTGGAGCAGCTGCAGGTTTCTAAAGTGAAAGGAGGCAATCAAAATGCTTCTGCTA ATGGAGCTCGAATGCGTAGAAAAAGTGCTGATGATGTTGGCCGTGTGAGGACCCTGTCATCTTATCCCCGCCCCTCTGCA TCCCCTCTCTATACAAACCTTCGAAGTTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0284000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGACLSAQIKAESPNNTGLSSKNVSTNGNDLSCANSNGLAASVAQTPRSEGEILQSSNVKSFTFIELKTATRNFRPDSVL GEGGFGSVFKGWIDENTLAAAKPGIGIGIAVKRLNHESFQGHREWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYEFM PRGSLENHLFRRGSYFQPLSWSLRVKVALDAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYTAKLSDFGLAKDGPTGDKS HVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKKAVDKNRPSGQHNLVEWAKPYLANKRKVFRVLDSRLE GQYSSDEAYKVATLALRCLSTESKFRPNMDEVVKALEQLQVSKVKGGNQNASANGARMRRKSADDVGRVRTLSSYPRPSA SPLYTNLRS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF56
2 373 372 1.4E-207 –
PANTHER
PTHR45621
2 373 372 1.4E-207 –
Gene3D
G3DSA:3.30.200.20
49 159 111 9.5E-34 –
SUPERFAMILY
SSF56112
51 361 311 2.46E-79
IPR011009
ProSiteProfiles
PS50011
74 359 286 37.799
IPR000719
Pfam
PF07714
78 356 279 8.5E-47
IPR001245
ProSitePatterns
PS00107
80 112 33 -
IPR017441
CDD
cd14066
80 359 280 1.41991E-93 –
Gene3D
G3DSA:1.10.510.10
160 383 224 9.8E-62 –
ProSitePatterns
PS00108
205 217 13 -
IPR008271
MobiDBLite
mobidb-lite
365 387 23 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0284000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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