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LotjaGi3g1v0285500.1

Overview

Field Value
Gene ID LotjaGi3g1v0285500
Transcript ID LotjaGi3g1v0285500.1
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Pumilio-like protein; TAIR: AT2G29190.1 pumilio 2; Swiss-Prot: sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2; TrEMBL-Plants: tr|I1MDC9|I1MDC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0285500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:57699767..57707667) extracted from Lotus japonicus Gifu genome v1.2.

CTTTAAAAAAAACAGAGACTGAGTAATTTGGGGTTGGGTTTGGTTGCCATTATCAGTGTATTGTATATAATGTATATAAT ACTACTAAATGGTTTGATTTCCTCCTCTTCTTCCTAGAAACAAAAGAAAGAAAGAAAACAGAACAAACAAAACCCTAAAA GGGTTCTTGTATCAACCAAAATCGCCGCCGGATTGATCTCAACTGTTCCTCTTTCATCTAACTGCACAAAAAACCTCACT TTCCTCTCTCTCTCTGTTTCCCACGCAATTTTGTTAATTCAAGATTCATGTCAGCAATTTTCATCACCCCAGCTTCAAAT TATCAATCTTTTTTTGCTGATTGATTCTTCCTCAGTTTTCTTTCAGCTGTAGCATCCATGGCGATGACTAATTCTTGGTA TTATTGTTTTTACTTATTTTAATTTCTTGTTCTTGGTAGTTAAGTGAGAGCTTCTGAAGCTGTAAATATGGGGCTTTGGC TTTCTGTTAGGAAAAGTTTGCGTTTTTAACTTGTTTAGCTATTTAGGGTTTGGTTTGTGGTGATGGGTAGTTGCTGATCA GGTTAAACTGTGATGATCAATTTGACTAGTTTCTGAAAATGCTGTCTGAACTGGGTAGGAGGCCGGTGCTGGGTGGGAAC GAGGGTTCTTTTGGTGATGAATTGGATAAGGAGATAGGGATGTTGCTTCGTGAGCAGCGGCGGCAGGATGTTGATGATCA CGAGCGCGAGCTCAATCGGTATAGGAGTGGATCAGCGCCTCCAACTGTGGAGGGTTCTCTGAATGCAGTTGGAGGGTTGT TTGGAGGCGGCGGCGGCGGCGGTCTCGCTGGCCCATTTTCTGAATTTCCTGGGGCTAACCATGAGAATGATTTTGCGTCT GAGGAAGAGCTTAGGTCTGATCCGGCTTATCTTCAATACTATTACTCCAATGTGAATTTGAATCCTCGACTTCCGCCTCC TTTGCTATCAAAGGAGGATTGGAGGTCTGCACAGAGAGCTTCAGTTCTTGGTGGAATTGGAGATAGGAGAAAAGTGAACA GGGTTGATGACAGTGGTGCTAGATCATTGTTTGCAACCCCTCCGGGGTTTAACTCGAGGAAGTCAGAGAGTGAGGCGGAG AACGAGAAAATGAGAGGTTCTGCTTCTGCAGAGTGGGGTGGTGATGGGCTCATTGGCTTGCCAGGCCTAGGTCTTGGGAG TAAACAAAAGAGCCTTGCAGAAATTTTCCAGGTAGCTTGCTTCTTTCATTGTGTTCTATTCTTGGCACCCTCACTCTTTA GCATCTATTCATTTTTGTGTTTTCACTTTTATCTTTGACACATCATACGATATTGGTTTCTTAGGTTCAACATGTGGTTC ATTGATGCATTTATATCTTTTTTTTAATGTTTGAACTTGTTAAATCTTGTGGGAAATAAAGTTTGATTTATTCAATGGTA GACGTTAAGATGCCTCTGTGGCATTATTATTTCTCTTTTAGCTTGTACAATGTCATTTCTATTGCTCATGGTGTTGGGAA GTAGCAGTATAAAATTCATGTGAAGCTTCATTGTTTTTTCATCAACTTCCACTGATGATGGGTTCCTTTTTGTTTGTCCA GTAGTGCTTGGCTTTTTTTAGTTTCATGCTGGCTGAAATGTTTATACTTCTAGTTCTGTACCTTGCTCTGTTGCATCCTT TCTAAAATCTTATAGGCACTCACTGAAAACCTGTAAGACCACGAATAATTCTGGAACTGACTGACTTGGCTCTGTGTGGG GTTTACATTCAGCACTTCTGAAGAATAATATCTTTTGGCACACTTGTGAACATCATAATATGGAAGCTTCTGAGCATATG TTGGTCATGGTCCTGCTGCAGCTTCTTTTTTGTCTGTTGCTGGATTCATATTTCAGACATTTCATCACATCATTTGTTTG GCTTAATCTTTATTTTATCTCTTAAACCTTGGAAGTTTGTGCCACAATTCATTAACTTTTTCTAGTAAAAATGTATAATA GGCTTCCTAATCAGTTGTAACTTGTAGTTGTACCAATGTTCATTTAGCTTTCTAGCATATACTACACACTCATTTGTAAT TATTTAGCAATTTCCCTGTCATCTAATACTTTTTAACTTTTGTTTCCTTACCATTGTCCGCAAGGGCACATGTCACTGAC ATGTGCATTATGTCAGCATTCTTCACACACACAATTATTTTCCTTTGTTTCTGTTCATTTTTTTGTACCCATAACTTATA ATCAGCAATTGCGCAGGATGACATGGGACATAAGAACACTATTGCTGGATTTCATTCTCGCCCAGCCAGCCGCAATGCAT TTGATGAAAATGTTGATATTATGACTTCTGCTGAAGCAGACCTGGCTCATTTATGCCGTGATTCCTCAACCACTGATGCC TTAAGATCTGGAACAAATCTTCAGGGTTCATCTGCAACCCAAAATATTGGCACACAAAGTTCATATAGTTATGCTGCTGC ACTTGGCTCTCCCTTGTCACGAAGTACCACTCCTGATCCACAGCATGTTGCTAGAGCCCCCAGTCCTTGCCTCACACCTA TTGGTGGTGGGAGAGTTGTTGCTGCTGAGAAGAGAGGCATGGCCAATCCTGATGCATATAATGTTTCATCCGGCCTCAAT GGGTCAGCTGATATTGTGGATGCATTATCTGGCATGAATTTGTCAGCTGATGATGTATTGGATGGTGATAACCATTTCCC ATCACAGGTTGAGTCAGATGTTGATAATCATAGGAGATATCTTTTTGGTTTGCAAGGTGGTCAGGATCATGGCAAGCAGC ATGCATATTTAAAGAAGTCTGAGTCAGGACACATGCAAAAAACAGCTTACTCTGGTCCAGGTAAGAGCGGTGGGAACGGA TCAGACATCAACAATTCCTTGGATAGGCAGATTGAGCTGCAAAAATCTGCTGTTTCTCCCAATAACTCATATTTCAAGGG ATCACCTACATCTCCTTTTAATGGTGGAGGTGGTATGCCTGCTCAGTACCAGCCTTTAGATGGTACCAATTCATCATTCA CTAACTATGGCCTGAGTGGGTATGCTGGAAATCCAGCATTGGCATCCTTGATGGCTAGCCAACTTGGAACTGGTAATATG CCACCCCTATTTGAAAATGTTGCTGCAGCATCAGCAATGGCTTCCCCTGGAATGGACTCTAGAATTCTTGGTGGTTTGGC TTCTGGCGTTGCTTCTCCATCTGATTTGCATATTCACGGAAGAATGGGAAATCAAATTTCAGGTGGTGCTCTCCAGGCTC CTTTTGTCGATCCCATGTATCTTCAGTACATGAGAGCATCTGAATATGGTTCCCCACAACTGGCTGCACTTAACGACCCA TCTGTGGATAGAAATTACTTGGGCAACTCGTACATGAATTTACTTGAGCTTCAGAAAGCTTATCTTGGGAATCTGCTTTC ACCTCATAAGTCTCAATACAATGTTCCACTGGGTGGTAAATCAGGTGGCTCCAATCATCATGGTTATTATGGAAATCCTG CGTATGGGGTTGGTTTGTCTTACCCTGGAAGTCCGATGGCAAACTCTTTATCCTCTTCTCCAGTTGGATCTGGCAGTCCT ATTAGGCACAATGATCTGAATATGCATTTTGCGTCTGGAATGAGGAATGTAGCTGGTGTTATGGGACCATGGCATCTAGA TACTGGAAACATGGATGAAAGCTTTGCATCGTCTCTGTTGGAAGAGTTTAAAAGCAACAAAACAAAATGTTTTGAGCTTT CTGAAATTTCCGGCCATGTTGTTGAATTCAGGTTTTTTTGCCTGTTAGTTGTTTTGGTGGTTAATTACTTAATTTTATAT TGCTCTAATTTCATTTGAAAAAATTAATTTTATGAATTGTCTCTCATCTGCAGTGCTGATCAATATGGGAGCCGGTTTAT CCAACAAAAGCTTGAAACAGCAACTACTGAAGAAAAAACTATGGTTTATCAGGAAATTATGCCTCATGCTCTTGCGTTGA TGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGGTAGATATTAATTAACATTCTCACTCTACTGCTTAAGTTGTTCGC TTTTAATGGATCTTGTTAGACTGACAATTTCCATCTGGCAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAGTTA GCCAACAAGCTATTTAGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGTCGGGTCATCCAGAAGGTATTGACAGC TTTGTGTATAGTGATTTCTATGAATGACTGTGCATGGTCTTCTGAATATATCATCTGTTTATGTTTTTTTAATAAATATT TTATATATCTCTTTAGGCCATAGAAGTTGTTGATCTAGACCAGAAGATAAAGATGGTTCAAGAGCTTGATGGTAATATCA TGCGCTGTGTACGAGATCAGAATGGTAACCATGTTATTCAGAAGTGTATTGAATGTGTACCTGAAGATGCAATCGACTTT ATTGTCTCAACCTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGTCGGGTGATACAGGTAAAATTCTT CGGTACTTGTGTTATTCTTTGTATGTACTTAAATCCTTGAACATACAATGATGCCTTTTACATGGCAGAGAGTCCTGGAG CACTGCAAAGACCCTAACACACAGCAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTAGCCCAGGATCAGTA CGGAAACTATGTTGTCCAGGTTTATAATTTATTCTTACAACTTACAGTTAGGGCTTTTCTATTGCTGCAACTATTGACTT GAAAGTTGAAGCCTGACAGTTTCATGCTGTGTGTGGTAGTTGATGTTGTTGCTTGTGAATTCCCTGCAGCAATCTAGCTT TGTTGAGATGATAATACAGATCATCATAGTTTTTCTGCACTTTCGGTTGATTATAATCCTTGTAGTTCACCTCTCATGTT TTTCTGAAATTATTCCACTGCACATTTTTTTTCTACAATTGTTTTATTTACCTTTTATCTGAACATATGAATGTCTCCTC CTTTGTTATGAATATGATATACATTGACACAGCATTTTCCTTGTCAATGGTATGACGAAATTCAGTATTAGACTTTTTTA TGTTTTTAATTGTGCATGTCTTGGAAGACATGTGTATTGTGTATAACTCCTTCCAAATTTTTATTGCTTGTGATATGAAC TTCTAGTTGCTTCTCCAGCAAATACTTGGTACCTCATACAAATGAAGCTTTTGTATTACTTGACTTTATATCCACATAGT ATGTCATATATACAAGTCAAGCTGATCACTTGTCCTGTTTCATCCCCTCTTGAATAACAGCATGTACTTGAGCATGGGAA ACCTCATGAGCGTTCAGCTATTATCAAGGAATTAACTGGCAATATTGTTCAAATGAGCCAACAGAAGTTTGCCTCAAATG TTGTGGAGAAGTGTTTGGCCTTTGGAGGTCCTGCTGAACGCCAATTTCTTGTGAATGAGATGCTTGGATCCACGGATGAA AATGAGCCTCTTCAGGTTCTTTAAATTACCTTTATAAACTACATTATCCCCCCTACTGTCTACTGATTATTCTGAGAACC TTAGAATTATCTCTCCAAAGATTTAAATATGAGTAGTTATTACTATAATTAAAAACATGTTGACCTAGTCTTTTAAAAAT AATATTGTCCATGCATCCACGCTGTAGAATGTTTGAATACATTGATGTGTTTTCACATATTTCGTGAATCTGTATTGAGC CTTGATTACTGAAGTTTATGATCTATAAAAAGATGGTAATTTTATTCCTACAGTCCTTTTGATACAATTGATACACTTCG TAAGGATGCTCTAGATCCCCATCATATCTTTACGAAACTGGTAGTAGTTTGTCATTCTTCAAATGCTAAATCGGGTTCCT TTTATTTACAGGCCATGATGAAAGATCAATTTGCTAATTATGTTGTGCAAAAGGTGCTGGAGACTTGTGATGACCATCAG CGTGAGCTAATTCTTTCACGAATTAAAGTCCATCTGAATGCATTGAAAAAATACACCTACGGAAAGCATATTGTCGCACG TGTAGAGAAACTTGTTGCTGCTGGAGGTACTTAATTCCTCATTTGCACTATCACTTATTTTGATATATTTCTGCATCATG TGTTTGGCTTAGGTGTTTGTTCTTTTGACATATGGACATGAAGTGAGCTGCTAATTGTGTTCCATCATGTATAGCATGTT TGGTTGCATGGTGGAATGCTCTACAATCACTTCTGGTTAGATTTACGAGTCTAACCAGAAGTGCACGGTAGAGTGTGTTT ATTTCCAGTTGGGAAACCCTAGAATCAATTGATGTTTGAGAGTCATTTTAGAGATTTGATTTCAGACCCAAAGTCATTTC TGATAGAAGCTAGAGAGAGTAGTTTATGTATTGAACATGATCAATAGTGAGACATTACAACTAAATTTCGTTACATAACC CAACAATATCCTTCTCTCCATAATTGTATCCAAACACAAATCAATTGTGACAGACGCTCATCTAGACACACTTTAGCTTC TAAGTAAACATGCATTGGATTATGTGAAAATTGTGAAAACAAACACGCTATGTATGCTTCTTAATTGCATGCTTCTATTG AGTTTTCATATGCTGAAGAAGTATTACAAAGTAGCTTGCCAACTTGTGATCTCATTTGTTGCAGAGAGGAGAAGTGCTGC TCAGTCTCCTCATCCTACTGCTTAGATGGGCATAGAAAAAGGATGTTCTTTGTACAGCTAACTGAGGCTAGTGTGAGCTT CTTCCCCATCTCCTCCTCCTTTGTTCTCCTGCATCCACGAATGGAAATAAAATTATCAGTTGTCTTGTAATGAACTGTAC ATTTGTAGTCTTAAGCTTATACATAGAATTTAAGTGAGGTTGAGGTTCAGATGTGTAATACATGCCCTGCAGAGAGATAA TACACGCCTTTTAAGGATGTAAAGTTTTATAAAATGGTGAGGTAGTTTATAAGTTGACGATGACGATGCGACTGTACAAA ATGTTGCTATGTGGAGAGCTGTTTATGTTTAGGTGAGAGCAGGGTTTTTCTTTCATGTATGGTTATTGACTTTATTCCCT AATTTTTCAAGTTTACTTTTCCCTTCACTATATCTTGTGATAGCGATGTTATGCTGAGTTACTTTTTGCGACATAACAAT GACAAATTAGTTCTTTGGTCACTTTATTTGTATTCATTGTCCTTTTTGTGTAAAAGTCGGGTAAGCAACAAAAAAAGTGA TCAGGATGGAGTGAAATCTTCTAGTCGTTGCTTACCATCAAATGATATGATACATTTTTTAAGAAAGTTTAAATTGGACT AAGTGCATGCTTTAATACACGGTAGATAACCACGATAAGTCAAAAGCATGGTGAATAGAAGTAATTTCTATTAGCTTTGC TTTTGTCCACCGTGCTTTTGTCTCTCCTGTGGTTTTTTAACCGTGTATTCTCTCCATTACAGTCCTTCCCTGATCTTGTT CTGCCTATGACTTTCATCCCTATCAAGGGAGCTCTATCTAATGAATGGAGAGTCCATTTTGAAATTGTGTTTCTTTATCT AATGAATGGAGAGTCTTTTAGAAATAGTTGCTCAGTAACCCAGAGTACATGCTTCAACAGGAATTACACAGGATAGTTGG TCATATTGTCATCATCCTAAGAAAAGAATACCCGCAGGTCATATTAGAACTTGTTCCTTTCTTCCTTCTATTTTTCATAG GCAAAAGAACGGGTAAAGAGCTTCACTTTTTTATCAACTTGTTTAATGCCATTATGTTGAACTACTCAAGTCAGCAGATA ACCTTGTGGAGCTTGTCTTCTCAGTTCATATTGAAGAACTCATAGTATAGGAAGGACTCAT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0285500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGTCTGAACTGGGTAGGAGGCCGGTGCTGGGTGGGAACGAGGGTTCTTTTGGTGATGAATTGGATAAGGAGATAGG GATGTTGCTTCGTGAGCAGCGGCGGCAGGATGTTGATGATCACGAGCGCGAGCTCAATCGGTATAGGAGTGGATCAGCGC CTCCAACTGTGGAGGGTTCTCTGAATGCAGTTGGAGGGTTGTTTGGAGGCGGCGGCGGCGGCGGTCTCGCTGGCCCATTT TCTGAATTTCCTGGGGCTAACCATGAGAATGATTTTGCGTCTGAGGAAGAGCTTAGGTCTGATCCGGCTTATCTTCAATA CTATTACTCCAATGTGAATTTGAATCCTCGACTTCCGCCTCCTTTGCTATCAAAGGAGGATTGGAGGTCTGCACAGAGAG CTTCAGTTCTTGGTGGAATTGGAGATAGGAGAAAAGTGAACAGGGTTGATGACAGTGGTGCTAGATCATTGTTTGCAACC CCTCCGGGGTTTAACTCGAGGAAGTCAGAGAGTGAGGCGGAGAACGAGAAAATGAGAGGTTCTGCTTCTGCAGAGTGGGG TGGTGATGGGCTCATTGGCTTGCCAGGCCTAGGTCTTGGGAGTAAACAAAAGAGCCTTGCAGAAATTTTCCAGGATGACA TGGGACATAAGAACACTATTGCTGGATTTCATTCTCGCCCAGCCAGCCGCAATGCATTTGATGAAAATGTTGATATTATG ACTTCTGCTGAAGCAGACCTGGCTCATTTATGCCGTGATTCCTCAACCACTGATGCCTTAAGATCTGGAACAAATCTTCA GGGTTCATCTGCAACCCAAAATATTGGCACACAAAGTTCATATAGTTATGCTGCTGCACTTGGCTCTCCCTTGTCACGAA GTACCACTCCTGATCCACAGCATGTTGCTAGAGCCCCCAGTCCTTGCCTCACACCTATTGGTGGTGGGAGAGTTGTTGCT GCTGAGAAGAGAGGCATGGCCAATCCTGATGCATATAATGTTTCATCCGGCCTCAATGGGTCAGCTGATATTGTGGATGC ATTATCTGGCATGAATTTGTCAGCTGATGATGTATTGGATGGTGATAACCATTTCCCATCACAGGTTGAGTCAGATGTTG ATAATCATAGGAGATATCTTTTTGGTTTGCAAGGTGGTCAGGATCATGGCAAGCAGCATGCATATTTAAAGAAGTCTGAG TCAGGACACATGCAAAAAACAGCTTACTCTGGTCCAGGTAAGAGCGGTGGGAACGGATCAGACATCAACAATTCCTTGGA TAGGCAGATTGAGCTGCAAAAATCTGCTGTTTCTCCCAATAACTCATATTTCAAGGGATCACCTACATCTCCTTTTAATG GTGGAGGTGGTATGCCTGCTCAGTACCAGCCTTTAGATGGTACCAATTCATCATTCACTAACTATGGCCTGAGTGGGTAT GCTGGAAATCCAGCATTGGCATCCTTGATGGCTAGCCAACTTGGAACTGGTAATATGCCACCCCTATTTGAAAATGTTGC TGCAGCATCAGCAATGGCTTCCCCTGGAATGGACTCTAGAATTCTTGGTGGTTTGGCTTCTGGCGTTGCTTCTCCATCTG ATTTGCATATTCACGGAAGAATGGGAAATCAAATTTCAGGTGGTGCTCTCCAGGCTCCTTTTGTCGATCCCATGTATCTT CAGTACATGAGAGCATCTGAATATGGTTCCCCACAACTGGCTGCACTTAACGACCCATCTGTGGATAGAAATTACTTGGG CAACTCGTACATGAATTTACTTGAGCTTCAGAAAGCTTATCTTGGGAATCTGCTTTCACCTCATAAGTCTCAATACAATG TTCCACTGGGTGGTAAATCAGGTGGCTCCAATCATCATGGTTATTATGGAAATCCTGCGTATGGGGTTGGTTTGTCTTAC CCTGGAAGTCCGATGGCAAACTCTTTATCCTCTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGATCTGAATAT GCATTTTGCGTCTGGAATGAGGAATGTAGCTGGTGTTATGGGACCATGGCATCTAGATACTGGAAACATGGATGAAAGCT TTGCATCGTCTCTGTTGGAAGAGTTTAAAAGCAACAAAACAAAATGTTTTGAGCTTTCTGAAATTTCCGGCCATGTTGTT GAATTCAGTGCTGATCAATATGGGAGCCGGTTTATCCAACAAAAGCTTGAAACAGCAACTACTGAAGAAAAAACTATGGT TTATCAGGAAATTATGCCTCATGCTCTTGCGTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGC ATGGACTTGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTATTTAGCCATGTTCTGACACTTAGCCTTCAAATGTATGGT TGTCGGGTCATCCAGAAGGCCATAGAAGTTGTTGATCTAGACCAGAAGATAAAGATGGTTCAAGAGCTTGATGGTAATAT CATGCGCTGTGTACGAGATCAGAATGGTAACCATGTTATTCAGAAGTGTATTGAATGTGTACCTGAAGATGCAATCGACT TTATTGTCTCAACCTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGTCGGGTGATACAGAGAGTCCTG GAGCACTGCAAAGACCCTAACACACAGCAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTAGCCCAGGATCA GTACGGAAACTATGTTGTCCAGCATGTACTTGAGCATGGGAAACCTCATGAGCGTTCAGCTATTATCAAGGAATTAACTG GCAATATTGTTCAAATGAGCCAACAGAAGTTTGCCTCAAATGTTGTGGAGAAGTGTTTGGCCTTTGGAGGTCCTGCTGAA CGCCAATTTCTTGTGAATGAGATGCTTGGATCCACGGATGAAAATGAGCCTCTTCAGGCCATGATGAAAGATCAATTTGC TAATTATGTTGTGCAAAAGGTGCTGGAGACTTGTGATGACCATCAGCGTGAGCTAATTCTTTCACGAATTAAAGTCCATC TGAATGCATTGAAAAAATACACCTACGGAAAGCATATTGTCGCACGTGTAGAGAAACTTGTTGCTGCTGGAGAGAGGAGA AGTGCTGCTCAGTCTCCTCATCCTACTGCTTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0285500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGSLNAVGGLFGGGGGGGLAGPF SEFPGANHENDFASEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRSAQRASVLGGIGDRRKVNRVDDSGARSLFAT PPGFNSRKSESEAENEKMRGSASAEWGGDGLIGLPGLGLGSKQKSLAEIFQDDMGHKNTIAGFHSRPASRNAFDENVDIM TSAEADLAHLCRDSSTTDALRSGTNLQGSSATQNIGTQSSYSYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVVA AEKRGMANPDAYNVSSGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSE SGHMQKTAYSGPGKSGGNGSDINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYGLSGY AGNPALASLMASQLGTGNMPPLFENVAAASAMASPGMDSRILGGLASGVASPSDLHIHGRMGNQISGGALQAPFVDPMYL QYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSY PGSPMANSLSSSPVGSGSPIRHNDLNMHFASGMRNVAGVMGPWHLDTGNMDESFASSLLEEFKSNKTKCFELSEISGHVV EFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYG CRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVL EHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKCLAFGGPAE RQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERR SAAQSPHPTA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12537:SF128
31 1042 1012 0.0 –
PANTHER
PTHR12537
31 1042 1012 0.0 –
MobiDBLite
mobidb-lite
34 64 31 - –
MobiDBLite
mobidb-lite
34 48 15 - –
MobiDBLite
mobidb-lite
151 186 36 - –
MobiDBLite
mobidb-lite
288 307 20 - –
Pfam
PF07990
304 713 410 2.2E-152
IPR012940
MobiDBLite
mobidb-lite
384 424 41 - –
MobiDBLite
mobidb-lite
403 424 22 - –
MobiDBLite
mobidb-lite
436 465 30 - –
ProSiteProfiles
PS50303
694 1034 341 132.745
IPR033133
Gene3D
G3DSA:1.25.10.10
694 1039 346 7.8E-142
IPR011989
SUPERFAMILY
SSF48371
697 1031 335 2.49E-119
IPR016024
CDD
cd07920
710 1030 321 6.43875E-176
IPR033712
SMART
SM00025
714 749 36 2.4E-5
IPR001313
Pfam
PF00806
714 744 31 1.7E-6
IPR001313
ProSiteProfiles
PS50302
714 749 36 11.3
IPR001313
SMART
SM00025
750 785 36 2.1E-6
IPR001313
ProSiteProfiles
PS50302
750 785 36 10.46
IPR001313
Pfam
PF00806
753 781 29 3.7E-6
IPR001313
ProSiteProfiles
PS50302
786 821 36 10.577
IPR001313
SMART
SM00025
786 821 36 4.5E-7
IPR001313
Pfam
PF00806
787 816 30 2.2E-5
IPR001313
ProSiteProfiles
PS50302
822 857 36 9.924
IPR001313
SMART
SM00025
822 857 36 4.5E-7
IPR001313
Pfam
PF00806
827 855 29 8.2E-6
IPR001313
ProSiteProfiles
PS50302
858 894 37 10.88
IPR001313
SMART
SM00025
858 894 37 3.2E-7
IPR001313
Pfam
PF00806
859 890 32 6.2E-9
IPR001313
SMART
SM00025
895 930 36 1.8E-6
IPR001313
ProSiteProfiles
PS50302
895 930 36 12.117
IPR001313
Pfam
PF00806
898 926 29 2.4E-6
IPR001313
ProSiteProfiles
PS50302
931 966 36 9.69
IPR001313
SMART
SM00025
931 966 36 8.6E-8
IPR001313
Pfam
PF00806
932 964 33 2.5E-5
IPR001313
ProSiteProfiles
PS50302
967 1008 42 10.017
IPR001313
SMART
SM00025
973 1008 36 8.7E-7
IPR001313
Pfam
PF00806
981 1007 27 2.4E-6
IPR001313
ProSiteProfiles
PS50302
1009 1044 36 4.651
IPR001313

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0285500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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