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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0285800 |
Transcript ID | LotjaGi3g1v0285800.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pumilio-like protein; TAIR: AT2G29190.1 pumilio 2; Swiss-Prot: sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2; TrEMBL-Plants: tr|I1MDC9|I1MDC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0285800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:57770173..57779370) extracted from Lotus japonicus Gifu genome v1.2.
GGTTGCCATTATCAGTGTATATAATACTACTAAATGGTTTGATTTCCTCCTCTTCTTCCTAGAAACAAAAGAAAGAAAGA AAACAGAACAAACAAAACCCTAAAAGGGTTCTTGTATCAACCAAAATCGCCGCCGGATTGATCTCAACTGTTCCTCTTTC ATCTAACTGCACAAAAAACCTCACTTTCCTCTCTCTCTCTGTTTCCCACGCAATTTTGTTAATTCAAGATTCATGTCAGC AATTTTCATCACCCCAGCTTCAAATTATCAATCTTTTTTTGCTGATTGATTCTTCCTCAGTTTTCTTTCAGCTGTAGCAT CCATGGCGATGACTAATTCTTGGTATTATTGTTTTTACTTATTTTAATTTCTTGTTCTTGGTAGTTAAGTGAGAGCTTCT GAAGCTGTAAATATGGGGCTTTGGCTTTCTGTTAGGAAAAGTTTGCGTTTTTAACTTGTTTAGCTGTTTAGGGTTTGGTT TGTGGTGATGGGTAGTTGCTGATCAGGTTAAACTGTGATGATCAATTTGACTAGTTTCTGAAAATGCTGTCTGAACTGGG TAGGAGGCCGGTGCTGGGTGGGAACGAGGGTTCTTTTGGTGATGAATTGGATAAGGAGATAGGGATGTTGCTTCGTGAGC AGCGGCGGCAGGATGTTGATGATCACGAGCGCGAGCTCAATCGGTATAGGAGTGGATCAGCGCCTCCAACTGTGGAGGGT TCTCTGAATGCAGTTGGAGGGTTGTTTGGAGGCGGAGGCGGCGGCGGCGGTCTCGGTGGCCCATTTTCTGAATTTCCTGG GGCTAACCATGAGAATGATTTTGCGTCTGAGGAAGAGCTTAGGTCTGATCCGGCTTATCTTCAATACTATTACTCCAATG TGAATTTGAATCCTCGACTTCCGCCTCCTTTGCTATCAAAGGAGGATTGGAGGTCTGCACAGAGAGCTTCAGTTCTTGGT GGAATTGGAGATAGGAGAAAAGTGAACAGGGTTGATGACAGTGGTGCTAGATCATTGTTTGCAACCCCTCCGGGGTTTAA CTCGAGGAAGTCAGAGAGTGAGGCGGAGAATGAGAAAATGAGAGGTTCTGCTTCTGCAGAGTGGGGTGGTGATGGGCTCA TTGGCTTGCCAGGCCTAGGTCTTGGGAGTAAACAAAAGAGCCTTGCAGAAATTTTCCAGGTAGCTTGCTTCTTTCATTGT GTTCTATTCTTGGCACCCTCACTCTTTAGCATCTATTCCCTGGGTTGTAACATATCTTATTTTTGTGTTCACTTTTATCT TTGACACATCATAAGAGACTGGCTTTCTTAGGTTCATTGATAAATTTATATATTTTTTTAATGTTTGAACTTTTTAAATC TTGTGGGAAATAAAGTTTGATTCATTCAATGGTAGACGTTAAGATGCCACAGATGCCTCTGTGGCATTATTATTTCTCTT TTAGCTTGTACAATGTTATTTCTATTGCTCATGGTGTTGGAAAGTAGCAGTATAAAGCTCATGTGAAGCTTCATTGTTTT TTCATCAACTTCTACTGATGATTGGTCCTTTTTGTTTGTCCAGTAGTGCTTGGCTTTTTTTAGTTTCATGCTGGCTGAAA TGTTTATACTTATAATTCTGTACCTTGCTCGATTGCATCCATTGTAAAATCTTATAGGCACTCAATGATAACCTGTAAGA CAACGAATAATTCAGGAATTGACTGACTTGGCTCTGTTTGTGGTTTACATTCAGCACTTATGAAAAATTATATCTTTTGA CACATTTGTAAACATCAAGCTTCTGAGCATATGTTTATCATTGTCCTGCTGCAGCTTCTTTTTTGTCCTTTGCTGGATTC ATATTTCATTCATTTCATCACGTCATTAATCTTTATTTTATCTCTTGAACTTTGAAAGTTTGTGCCACAGTTCATTAACT TTTTTTTTGTAAAATTGTACCAATGTTCATTTAACTTGCTAGCATCGACTGTAGACATTTTGTACTACACTCTCATTTGT AATCAATAATCATGTAGCGATTTCCCTTTCTTCAAATACTTTTTACTTTTGTTTCCCTAACCATTGCCTGCAAGGGCACA CGTGACTGACATGTGCATGATGTCAGCATTCTTCTCCACACACATGATTTTTTTTCTTTTGTTTCTGTACATTTTTTTGT GCCCAAAATTTATAATCACCAATTGCGCAGGATGACATGGGACATAAGACCACTATTGCTGGATTTCATTCTCGTCCAGC CAGCCGCAATGCATTTGATGAAAATGTTGATATTATGACTTCTGCTGAAGCAGACCTCGCCGATTTATGCCGTGATTCCT CAGCCACTGATGCCTTAAGATCTGGAACAAATCTTCAGGGGTCGTCTGCAACCCAAAATAATGGCACGCAAAGTTCATAT ACTTATGCTGCTGCACTTGGCTCTCCCTTGTCACGTAGTACTACTCCTGATCCACAGCATGTTGCTAGAGCTCCCAGTCC TTGCCTCACACCTATTGGTGGCGGGAGAGTTGCTGCTGCTGAGAAGAGAGGCATGGCCAATCCTGATGCATATAATGTTT CAACTGGCCTCAATGGGTCAGCAGATATTGTGGATGCACTATCTGGCATGAACTTGTCAGCTGATGATGTGTTGGATGGG GATAACCATTTCCCATCACAGGTTGAGTCCGATGTTGATAATCATAGGAGATATCTTTTTGGTTTGCAAGGTGGTCAGGA TCATGGCAAGCAGCATGCATATTTAAAGAAGTCTGAGTCAGGACACATGCAAAAAACAGCTTACTCTGGTTCAGGTAGGA GCGGTGGGAACGGGCCAGACATCAACAATTCCTTGGATAGGCAGATTGAGCTGCAAAAATCTGCTGTTTCTCCCAATAAC TCATATTTCAAGGGATCACCTACATCTCCTTTTAATGGTGGAGGTGGTATGCCTGCTCAGTACCAGCCTTTAGATGGTAC CAATTCATCATTCACTAACTATGGCCTGAGTGGGTATGCTGGAAATCCAGCATTGGCATCCTTGATGGCTAGCCAACTTG GAACTGGTAATATGCCACCCCTATTTGAAAATGTTGCTGCAGCATCAACAATGGCTTCCCCTGGAATGGACTCTAGAATC TTTGGTGGTTTGGCTTCTGGCATTGCTTCTCCATCTGATGTGCATACTCACGGAAGAATGGGAAATCAAATTTCAGGTGG TGCTCTCCAGGCTCCTTTTGTCGATCCCATGTATCTTCAGTACATGAGAGCATCTGAATATGGTTCCCCACAACTGGCTG CACTTAACGATCCATCTGTGGATAGAAATTACTTGGGCAACTCGTACATGAATTTACTTGAGCTTCAGAAAGCTTATCTT GGGAATCTGCTTTCACCTCATAAGTCTCAATACAATGTTCCACTGGGTGGTAAATCAGGTGGCTCCAATCATCATGGTTA TTATGGAAATCCTGCATATGGGGTTGGTTTGTCTTACCCTGGAAGTCCGATGGCAAACTCTTTATCCTCTTCTCCAGTTG GATCTGGCAGTCCTATTAGGCACAATGATCTGAATATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGTTATGGGT CCATGGCATCTAGATAGTGGAAACATGGATGAAAGCTTTGCATCGTCTCTGTTGGAAGAGTTTAAAAGCAACAAAACAAA ATGTTTCGAGCTTTCTGAAATTTCTGGCCATGTTGTTGAATTCAGGTTATTTTTTTCTGCCTGTTGGTTGTTTTGGTGTT AATTTTATATTGCTATACTTTCTTTTGAAAAAATAAATTTAATGAATAGTCTCTCATCTGCAGTGCTGATCAATATGGGA GCCGGTTTATCCAACAAAAGCTGGAAACAGCAACTACTGAAGAAAAGACCATGGTTTATCAGGAAATTATGCCTCATGCT CTTGCATTGATGACTGATGTCTTTGGTAATTATGTGGTTCAGAAGGTAGATATTAATTAACATTCTCACTCTGTACTGCT TGTGCACACTTGAGTCGCTCTCTTTTAATGGATCTTGTTAGACTGACAATTTCCATCGGGCAGTTTTTTGAGCATGGACT TGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTTTTTAGCCATGTTCTGGCACTTAGCCTTCAAATGTATGGTTGTCGGG TCATCCAGAAGGTATTGACAACTTTGTGTATAGTGATTTCTATGAATGACTGTGCATGGTCTTCTGAATATGTCATCTGT TTATGTTTTTTTAACAAATATTTTATATATCTCTTTAGGCCATAGAAGTTGTTGATCTAGACCAGAAGATAAATATGGTT CAGGAGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGTAACCATGTTATTCAGAAGTGTATTGAATGTGT ACCTGAAGATGCAATCGACTTTATTGTCTCAACCTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGATGTC GGGTGATACAGGTAAAATTCTTCGGTACTTGTGTTATTCTTTGTATGTACTTGAAGTCCTTGAACATACAATGATGCCTT TTATATGGCAGAGAGTCCTGGAGCACTGCAAAGATCCTAACACACAGCAAAAAGTTATGGATGAGATTTTAGGGGCAGTT AGCATGTTAGCCCAGGATCAGTACGGAAACTATGTTGTCCAGGTTTATAATTTATTTTTTACAACTACAGTTTGGGCTTT TCTATTGCCGCAACTATTGACTTGAAAGTTGAAGCCCTACAGTTTCATGCTGTGTGTGGTAGTTGATGTTGTTGCTTGTG GATTCCCTGCAGCAATCTAGCTTTGTTGAGATGATAATACAGATCATCATAGTTTTTCTGCACTTTCGGTTGATTATAAT CCTTGCAGTTCATCCCTCATGTTTTTCTTAAATTATTCCCCTGCACATTTTTTTTCTACATTTTTCATTTACCTTTTATC TGAACATAGGCATGTCTCCTTCTTTGTTATGAATATGATATACATTGACACAGCATTTTCCTTGTCAATGGTCTGACGAA ATTCAGTATTACACTTTTTTATGTTTTTTATTGTGCATGTCTTGGAAGACATGTACTCTTCAGTCATAATTGTTTGATCA CTTGATGTTATACTATGCAGTCCTTTCTACTTTATGTGTATTGTGTATACCTCCTTCCAAACTTTGTTGCTTGTGATATG AACTTCTAGTTCCTTCTCCAGCAAATACTTGGTACCTCATACAAATGAAGCTTTTGTATTACTTGACTTTATATTCGTAT AGCATGTCATATATACAAGTCAGTTAGTCAGCTGATCACTTGTTCTGTTTCATCCCCTCTTGGATAACAGCATGTACTTG AGCATGGGAAACCTCATGAGCGTTCAGCTATTATCAAGGAATTAGCTGGCAATATTGTTCAAATGAGCCAACAGAAGTTT GCCTCAAATGTTGTGGAGAAGTGTTTGGCCTTTGGAGGTCCTGCTGAACGCCAATTCCTTGTGAATGAGATGCTCGGATC CACGGATGAAAATGAGCCTCTTCAGGTTCTTTAAATTACCTTTATAAACTACATAATCCCCCCTACTGTCTACTGATTAT TCTGAGAACTTTAGAATTATCTCTCCAAAGATTTAAATGTGAGTAGTTCTTACTATAATTAAAAACATGTTGACCTAGTC TTTTTAAAAATAATATTATCCATGCATCCACACTGTAGAATGTTTGAATAGATTGATGTGTTTTCACATATTTCGTGAAT CTGCATTGAACCTTGATCACTGAAGTTTATGATCTATAAAAAGATGGTAATTTTATTTATAGAGTCCTTTTAATACAATT GATACACTTCGTAAGGATGCTCTAGATCCCCATCATATCTTTATGAAACTGGTAGTAGTTTGTCATTCTTGCAAATGCTA AATCAGGTTCTTCTTATATACAGGCCATGATGAAAGATCAATTTGCTAATTATGTTGTGCAAAAGGTGCTGGAGACTTGT GATGACCATCAGCGTGAGCTAATTCTTTCACGAATTAAAGTCCATTTGAATGCATTGAAAAAATACACCTACGGAAAGCA TATTGTCGCACGTGTAGAGAAACTTGTTGCTGCTGGAGGTACTTAATTCCTCATATGCGCTATCACTTATTTTGATATAT TTCTGCATCATGTGTTTTGCTTAGGTGTATGTTCTTTTGATATATGGACATGAAGTGAGCTGCTTGCTAATTGTGTTCCA TCATATATAGCATGTTTTGTTGCATGGTGGAATGCTCTACAATCACTTCTGGTTAGAATTTACGAGTCTAACCAGAAGTG CACGGTAGAGTGTTTATTTCCAGTTGGGAAACCCTAGAATTAGTTGATGTTTTCATTTTAGAGTTTTGATTTCAGACCCA AAGTCAATTCTGATAGAAGCTAGAGAGAGTAGTTTTGGTATTGAACATAATCAATAGTGAGACATTACAACTGAATTTCA TTACATAACCCAACAAAATCCTTCTTTCCATAATTGTATCCAAACACAAATCAATTGTGACAAACGCTCATCTAGTCACA CTTTAGCTTCTAAGTAAACATGCATTAGATTGTGTAAAAATCGTGAAAACAAACATGCTATGTCTGCTTCTTACTTGCAT GCCTCTATTGAGTTTTCATATGCTAAAGAGAGTATTACACAATATAGCTTGCCAACTTGTGATCTAATTTGTTGCAGAGA GGAGAATTGCTGCTCAGTCTCCTCATCCTACTGCTTAGATGGGCATAGAAAAAGGATGTTGTTTGTACAGCTAACTGAGG CTAGTGTGAGCTTCTTCCCCATCTTCTCCTCCTTTGTTCTCCTGCATCCACGAATGGAAATAAAATTACCAGTTGTCTTG TAATGAACTGTACATTTGTAGTCTTAAGCTTATACATAGAATTTAAGTGAGGTTGAGGTTCAGAGGTGTAATACATGCCC TGCAGAGAGATAATACACGCCTTTTAAGGATGTAAAGTTTTATAAAATGGTGAGGTAGTTTATGAGTTGACGATGACGAC GCGACTGTACAAAATGTTGCTATGTGGAGAGCTGTTTATGCTTAGGTGAGAGCAGGATTTTTCTTTCATGTATGGTTATT GACTTTATTCCCTAATTTTTCAAGTTTACTTTTCCCTTCACTATATCTTGTGATAGCGATGTTATGCTGAGTTTCTTTTT GTGACATAACAATGACAAATTAGTTCTTTGGTCACTTTATTTGTATTCATTTTGTCCTTTTTGTGTAAAAGTCGGGTAAG CAACAAAAAAAGTGATCAGGATGGAGTGAAATCTTCTAGCCTTTGCTTACCATCGAATGATATGATACATATTTTAAAAA AGTTTAAATTCGGCTAAGTGCATGTTGAATACACAGTAGAGAACCACGATAAGCCAAAAACATGGTGAATAGAAGTAACT TATATTAGCTTTGCTTTTTTCTACTGTGGTTTTTTAACTTTTAACCGTGTATTCTCTCTATTCCAGTCCTTCCCTGATTT TGTGCTGCCTATAACTTCCATCCCTATCTGGGGAGCTCTATCTAATGAAAGAGAGTCTATTTTGAAATTGTCTTTCTCTA TCTAATGAATGTGGACTCTTTTATAAATAGTTGTCCAGCAACCCAGAGTACATACTTCAACAGAAATTACACAGGATAGT TGGTCACACTGTTATCATCCTAAGAAAAGAATACCCGCAGGTCATCATGCTTTTGCATATTAGAACTTGTTCCTTTCTTC CTTCTATTTTTTATAGGCAAAAAACGGATAAAGAGCATCACTTTTTTATCAACTTGTTTAATGCCATTATGTTGAACTAC TCAAGTCAACAGAAAACCTTGTGGACCTTGTCTTCTCAGTTCTTATTCAAGAACTCATAGTGTAGGAAGGACTCATTTTT GACAATATGTTTAAAACTAACAAGAATTTTTCTACATGTCTGGTTTTGGATAGCACGCCCTTAGCTTTGCTTGGAATTAA TTCTACTCATTGAGACATGGTTTCCGAACACTATTAATATGTTTGGATGAGTTTCTGAAGTTACTCACATTATTTCTCTT CATAATCGATTTTTCTTTCAGAATCAATCTTAGAATGATTTCAAAACACGCGAATATATCACTCATGATTCATCAAAATC AAATTCTATCAAGCCGAACAAGATAATTCTCTTGCTAAAATTTGCTTGTTTCCGAAACTCAATCACATTGTGAAGACTAC ACAATTTGCTAATCATGCTAAAAATGATTAAAGTAAATTCCCATTCCAATGCATAGGACCTGACATAACTTCATTGTAGT TAATTGCATCCTAATCATCATCTTCATCTTTATCAATCTTCTGCCCAAATCCTTTAGGCCCTGCCCTGGCTCTGACCACT TTCTTCTTCTTCTTCTTTCCACCCTTAGCTGCTGCTTCTTTCTCAAACTTCTCTGTCTCTTTCTTCTGCAGGAAATCTTT CACTCCTAAATAGACAACCTGCCACACAAACATACCCTTCAACTCAAAACACAACCCTCATCCCAGAATTGTCAAGTTAA AGCAAAAAATCCAAACTTAAAACAAAATGTAAACTGGGATTTTTTTCTTTACCCCAAAAGTGATAACAGATAACCCAATG AAAGCAACAAAGAAAAGAGCTGAAATGAACACAGACACCCCATCATCAGTGGTGGTGACCAAGTCGGCAGCATCAACCGC TGCAGATTCCAGAGACAGAGCAGTGTCTTCGGCGGTGGCAGCCGGAGTAATGGGGCGGAGTGTGGTGGTGTTTCTTGGAC GTGGGTTTTGAAAAATAATGGATTTTTTGGATGGGATTGTGATGGGGGAGAGAGATGGCAGAGAAGGAAGAGATGTGGTT GCCAGAGAGATGCATGGGTGGGACTTTGAGTGGTGGAAAGTGGAGGAGAGGAAGGTTGCTATCTGTGGAGATGGGGTGGT GGCCATGGCTTCTCAGTCCTCAGCTTCAGCCTGTGACTTCTTTCCTGTCTGACGTGGCCCAACCAAAGCTTTGGGTTGGA TTGCTTTGCTATCAGTATATCAGTAATAATTCCTAGAGGAAAATGTTGATTGACCAAAAATATTGAGTAGATACATATTT TCAATGGAGATGATCTATAGCCTGGTACTCATATCAAAAGGAAAGGAGAGCGGTGATAAATTTAGTATCTGTTTGGTT
CDS sequence (LotjaGi3g1v0285800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTCTGAACTGGGTAGGAGGCCGGTGCTGGGTGGGAACGAGGGTTCTTTTGGTGATGAATTGGATAAGGAGATAGG GATGTTGCTTCGTGAGCAGCGGCGGCAGGATGTTGATGATCACGAGCGCGAGCTCAATCGGTATAGGAGTGGATCAGCGC CTCCAACTGTGGAGGGTTCTCTGAATGCAGTTGGAGGGTTGTTTGGAGGCGGAGGCGGCGGCGGCGGTCTCGGTGGCCCA TTTTCTGAATTTCCTGGGGCTAACCATGAGAATGATTTTGCGTCTGAGGAAGAGCTTAGGTCTGATCCGGCTTATCTTCA ATACTATTACTCCAATGTGAATTTGAATCCTCGACTTCCGCCTCCTTTGCTATCAAAGGAGGATTGGAGGTCTGCACAGA GAGCTTCAGTTCTTGGTGGAATTGGAGATAGGAGAAAAGTGAACAGGGTTGATGACAGTGGTGCTAGATCATTGTTTGCA ACCCCTCCGGGGTTTAACTCGAGGAAGTCAGAGAGTGAGGCGGAGAATGAGAAAATGAGAGGTTCTGCTTCTGCAGAGTG GGGTGGTGATGGGCTCATTGGCTTGCCAGGCCTAGGTCTTGGGAGTAAACAAAAGAGCCTTGCAGAAATTTTCCAGGATG ACATGGGACATAAGACCACTATTGCTGGATTTCATTCTCGTCCAGCCAGCCGCAATGCATTTGATGAAAATGTTGATATT ATGACTTCTGCTGAAGCAGACCTCGCCGATTTATGCCGTGATTCCTCAGCCACTGATGCCTTAAGATCTGGAACAAATCT TCAGGGGTCGTCTGCAACCCAAAATAATGGCACGCAAAGTTCATATACTTATGCTGCTGCACTTGGCTCTCCCTTGTCAC GTAGTACTACTCCTGATCCACAGCATGTTGCTAGAGCTCCCAGTCCTTGCCTCACACCTATTGGTGGCGGGAGAGTTGCT GCTGCTGAGAAGAGAGGCATGGCCAATCCTGATGCATATAATGTTTCAACTGGCCTCAATGGGTCAGCAGATATTGTGGA TGCACTATCTGGCATGAACTTGTCAGCTGATGATGTGTTGGATGGGGATAACCATTTCCCATCACAGGTTGAGTCCGATG TTGATAATCATAGGAGATATCTTTTTGGTTTGCAAGGTGGTCAGGATCATGGCAAGCAGCATGCATATTTAAAGAAGTCT GAGTCAGGACACATGCAAAAAACAGCTTACTCTGGTTCAGGTAGGAGCGGTGGGAACGGGCCAGACATCAACAATTCCTT GGATAGGCAGATTGAGCTGCAAAAATCTGCTGTTTCTCCCAATAACTCATATTTCAAGGGATCACCTACATCTCCTTTTA ATGGTGGAGGTGGTATGCCTGCTCAGTACCAGCCTTTAGATGGTACCAATTCATCATTCACTAACTATGGCCTGAGTGGG TATGCTGGAAATCCAGCATTGGCATCCTTGATGGCTAGCCAACTTGGAACTGGTAATATGCCACCCCTATTTGAAAATGT TGCTGCAGCATCAACAATGGCTTCCCCTGGAATGGACTCTAGAATCTTTGGTGGTTTGGCTTCTGGCATTGCTTCTCCAT CTGATGTGCATACTCACGGAAGAATGGGAAATCAAATTTCAGGTGGTGCTCTCCAGGCTCCTTTTGTCGATCCCATGTAT CTTCAGTACATGAGAGCATCTGAATATGGTTCCCCACAACTGGCTGCACTTAACGATCCATCTGTGGATAGAAATTACTT GGGCAACTCGTACATGAATTTACTTGAGCTTCAGAAAGCTTATCTTGGGAATCTGCTTTCACCTCATAAGTCTCAATACA ATGTTCCACTGGGTGGTAAATCAGGTGGCTCCAATCATCATGGTTATTATGGAAATCCTGCATATGGGGTTGGTTTGTCT TACCCTGGAAGTCCGATGGCAAACTCTTTATCCTCTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGATCTGAA TATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGTTATGGGTCCATGGCATCTAGATAGTGGAAACATGGATGAAA GCTTTGCATCGTCTCTGTTGGAAGAGTTTAAAAGCAACAAAACAAAATGTTTCGAGCTTTCTGAAATTTCTGGCCATGTT GTTGAATTCAGTGCTGATCAATATGGGAGCCGGTTTATCCAACAAAAGCTGGAAACAGCAACTACTGAAGAAAAGACCAT GGTTTATCAGGAAATTATGCCTCATGCTCTTGCATTGATGACTGATGTCTTTGGTAATTATGTGGTTCAGAAGTTTTTTG AGCATGGACTTGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTTTTTAGCCATGTTCTGGCACTTAGCCTTCAAATGTAT GGTTGTCGGGTCATCCAGAAGGCCATAGAAGTTGTTGATCTAGACCAGAAGATAAATATGGTTCAGGAGCTTGATGGTAA TATCATGCGCTGTGTACGAGATCAGAATGGTAACCATGTTATTCAGAAGTGTATTGAATGTGTACCTGAAGATGCAATCG ACTTTATTGTCTCAACCTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGATGTCGGGTGATACAGAGAGTC CTGGAGCACTGCAAAGATCCTAACACACAGCAAAAAGTTATGGATGAGATTTTAGGGGCAGTTAGCATGTTAGCCCAGGA TCAGTACGGAAACTATGTTGTCCAGCATGTACTTGAGCATGGGAAACCTCATGAGCGTTCAGCTATTATCAAGGAATTAG CTGGCAATATTGTTCAAATGAGCCAACAGAAGTTTGCCTCAAATGTTGTGGAGAAGTGTTTGGCCTTTGGAGGTCCTGCT GAACGCCAATTCCTTGTGAATGAGATGCTCGGATCCACGGATGAAAATGAGCCTCTTCAGGCCATGATGAAAGATCAATT TGCTAATTATGTTGTGCAAAAGGTGCTGGAGACTTGTGATGACCATCAGCGTGAGCTAATTCTTTCACGAATTAAAGTCC ATTTGAATGCATTGAAAAAATACACCTACGGAAAGCATATTGTCGCACGTGTAGAGAAACTTGTTGCTGCTGGAGAGAGG AGAATTGCTGCTCAGTCTCCTCATCCTACTGCTTAG
Protein sequence (LotjaGi3g1v0285800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGSLNAVGGLFGGGGGGGGLGGP FSEFPGANHENDFASEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRSAQRASVLGGIGDRRKVNRVDDSGARSLFA TPPGFNSRKSESEAENEKMRGSASAEWGGDGLIGLPGLGLGSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDI MTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVA AAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKS ESGHMQKTAYSGSGRSGGNGPDINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYGLSG YAGNPALASLMASQLGTGNMPPLFENVAAASTMASPGMDSRIFGGLASGIASPSDVHTHGRMGNQISGGALQAPFVDPMY LQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLS YPGSPMANSLSSSPVGSGSPIRHNDLNMHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISGHV VEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLALSLQMY GCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRV LEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFGGPA ERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGER RIAAQSPHPTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 20 | 20 | - | – | |
PANTHER | 31 | 1043 | 1013 | 0.0 | – | |
PANTHER | 31 | 1043 | 1013 | 0.0 | – | |
MobiDBLite | 35 | 64 | 30 | - | – | |
MobiDBLite | 152 | 187 | 36 | - | – | |
MobiDBLite | 290 | 309 | 20 | - | – | |
Pfam | 305 | 714 | 410 | 8.4E-152 | ||
MobiDBLite | 398 | 466 | 69 | - | – | |
MobiDBLite | 404 | 450 | 47 | - | – | |
ProSiteProfiles | 695 | 1035 | 341 | 132.628 | ||
Gene3D | 695 | 1040 | 346 | 1.4E-141 | ||
SUPERFAMILY | 698 | 1032 | 335 | 9.21E-119 | ||
CDD | 711 | 1031 | 321 | 2.82628E-176 | ||
ProSiteProfiles | 715 | 750 | 36 | 11.3 | ||
Pfam | 715 | 745 | 31 | 1.7E-6 | ||
SMART | 715 | 750 | 36 | 2.4E-5 | ||
SMART | 751 | 786 | 36 | 2.1E-6 | ||
ProSiteProfiles | 751 | 786 | 36 | 10.46 | ||
Pfam | 754 | 782 | 29 | 3.7E-6 | ||
SMART | 787 | 822 | 36 | 2.2E-6 | ||
ProSiteProfiles | 787 | 822 | 36 | 10.367 | ||
Pfam | 788 | 818 | 31 | 3.4E-4 | ||
SMART | 823 | 858 | 36 | 4.5E-7 | ||
ProSiteProfiles | 823 | 858 | 36 | 9.924 | ||
Pfam | 828 | 856 | 29 | 8.2E-6 | ||
SMART | 859 | 895 | 37 | 3.2E-7 | ||
ProSiteProfiles | 859 | 895 | 37 | 10.88 | ||
Pfam | 860 | 891 | 32 | 6.2E-9 | ||
ProSiteProfiles | 896 | 931 | 36 | 12.117 | ||
SMART | 896 | 931 | 36 | 1.8E-6 | ||
Pfam | 899 | 927 | 29 | 2.4E-6 | ||
ProSiteProfiles | 932 | 967 | 36 | 9.667 | ||
SMART | 932 | 967 | 36 | 3.6E-7 | ||
Pfam | 933 | 965 | 33 | 4.3E-5 | ||
ProSiteProfiles | 968 | 1009 | 42 | 10.017 | ||
SMART | 974 | 1009 | 36 | 8.7E-7 | ||
Pfam | 982 | 1008 | 27 | 2.4E-6 | ||
ProSiteProfiles | 1010 | 1045 | 36 | 4.604 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi3g1v0285800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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