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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0302200 |
| Transcript ID | LotjaGi3g1v0302200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|A0A072TPW8|A0A072TPW8_MEDTR LRR and NB-ARC domain disease resistance protein; Found in the gene: LotjaGi3g1v0302200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:63110076..63113324) extracted from Lotus japonicus Gifu genome v1.2.
GTTAAGTGTAAATCCCACATTATTGCAATTACAGTATCCAATTGATATTGTAAGAAAAAAACAATAACCAATTGCAAATT ACAAAATTCAAGTAAACTCAGTAGAGGATATGATGGTTTAGAGAACATGTAACAATTCAAGTGCTACATGTTTCGATTTC TCTTTAAGCAAAGTTTTGGTCTTAAGTTTGGGAAAAAGCTGAGATTGAGAATATAATAATGCAAATGTTTCCATGATACA AGAATTGAAAGTTGACTTCTAATTTGTCTGCCTGGTTCAAAAAAAAGACTAAGATAAAAGTGAGATCTGAATTGAGACGC TGCATAATCTGAAGCGAAGCAGTGATCAACTAATCATCATATCATATCATATCATATCATGTCAGTGGCTGTAAGTTTGT GCAAATCTGCAGCTAACAAAGTTGTGGAAAAACTAAGCTCTCTGCTCAAAGAGAGATACACCTTGTACCTCTCCTTCGAG GACGACCTCAAGAAGCTCCAAAGCGACTTGTCAGCTATCTCAGCAGTTCTTCATGATGCAGCAGAGAAACCAACAACAAC GCAGAGCCACAGCGTTCAGGACTGGTTGGGGAAGCTCCATGACACCCTGCACGATGCAGAAGACGTGTTGGATGACATCA ACGCTGAAGCTTTGAGGCAGAAAGTGGTGGCAGAATGGCGCTTCGTCACACTGGTTAGAAACTTGCTCTTCCTCTCTGGG ATTGATGCTAGAATCAAGGATATTCGAGGGAGGATTGATGATATAGCGAAACAGAGGAATAGTTTTCGCTTGCAGGAACC GGATCGTGATGGCGATCGCGATCGTGATCGTGATGTGGTTTTTACGCGAAGGCGGAGGGAGCAGGCGCGATTCGCGGAGG TTGTTGGAAGAGAAGGGGATCAGAAAGAGGTTGTGGAGCGGTTATTTGGAGGAGGTGAGGGTGTTTTTGCTGTTCCTGTT GTGGGAATTGGGGGTTTGGGGAAGACTGCACTGGTTGATTTGATTTTTGATGATGATAGGGTTAAGATGGGTTTTGATTT TAGGGTTTGGGTGGATGTGTGTGATGATTTGAATCCAGAGAGGATTAGGCACAAGAGAATCACCAGAGCAGTGGACTGTC GCGATGAAAATGTCCCTGCCATGGACTTGTTGTCAAGCCTGGAGTATAAACTGAGGGGTAAGAAGTTCTTGCTTGTCATT GATGATGTTTGGAATTGTAATAGGGTAGACTGGCTTGTTCTGAAGAAATTGTTAGGAAATGGGGATAGAGGAAGCAGGAT TCTGGTGACGACGCGCTACAAAATCACTGCATCCATCATGGGTGAGAATAGGGGATTGTATGAGTTAGGTGGATTAGCTG ACGGTGATTGTTGGTGTTTGTTTGAGAAATGGGCATTTGGGGAGGGAGAAAGTGCCTGTCATCCAAATCTGGCAAGAATA GGTCAAGAGATAGTGATGAAATGTGGTGGGGTGCCCTTAGCCATACGCACTTTGGGTGGATTACTGTCTGGAAGCAAAGA GGAATCTTATTGGTTGTCTGTGAGAAATAGTGATACTTGGGGTATTGGCCATATAGCTGAAAGTGAAGATGGTATATTGT CAGTGCTCAAGTTAAGCTATGATCAATTGCCATTGGGGTTGAAAGAGTGTTTTGCATATTGCTGCTTACTTCCCAAAGGG AGAGAATTTGATAAGCAAGATTTGATCCACTTATGGATGGCTCAAAGTTTCATTCATTCTCCTGATCAAAGTGACCAACA ACAATTAGAGGACATTGGGAGTTGGTATGTCAATGAGCTTGTGTCGAGATCTATTTTTGATGTCGTAAGAGAGAATCATA AAGGTGAAATAGTGGAGTGCAGGATGCATGATCTATTGCATGATCTTGCTAAATCAGTGGCAGAAAGCTTGATGGCTAGC TCCGGCACTACTGCAAATAACACCAGACACCTTTCATTGTGGGATACAGAAGTTCCAACTTCATATCTCAATTTACCAAA GTTGAGAACACTTGTTTTGCACACCAAATGCTCAGAATCCGAATTGCACGCACTTTTATCCGGCTCAACTTACTTGCGCG TGTTGGATTTGAGCCACTCAGGACTAAAACATGTGCCAAGTTGCATTGGTAACATGAAACATCTGAGGTATCTAAATCTA AGTGGCAACCCTGACCTTCAGTCTCTTCCTGATTCCATTTGTGGGCTGCATTTTCTACAGACTTTGAAGCTATCAGGGTG CAGAAGAATTAGCACATTCCCCAGAAATTTCAGTCACTTGGTTTCACTTAGACATTTGGTGATAACCACTCCATATGTTT GGGAGAAACAACTTGGGACTTTAACCTCCCTTCGGTGGTTAACAATTGAAAACTGTAGGAACCTCTTGTCTTTGACTGAA GTGACACAGCACCTCGTTGCCCTTCGGACACTGCGTATCCACAACTGTAGTAAATTAACTTCATTGCCAAGTAGTTTGAA AAACTGCATTGCCCTTGAGGATTTGGAGGTTGTGAACTGCCCCAAGATGGAATCTTTGGAGATTTGCATGCAGGGTCTGT CTAGTTTTCGCTCTTTAACCATCAAGGGTCTACACAAGCTGACAACTCTACCCATGAAGCTTGAATTTTATGCGAGCAGT CTTCAGTACCTGATCATCATAGATTGCCTTAGTCTCATGAAACTGCCTGATTGCGTGGGGAATCTCTCATCACTGATGCG TGTACACATTAGATATTGCCCCAACCTGCAAAATTTGCCACATGGGTTCTCTCACCTTAGTGCTTTACAAGTCTTGAAAA TTGATGGGTGTCCCCTTTTAAGCACAAGATGTAGGAGGAATGTTGGCCAGGATTGGCAACAGATTGCTCATGTACGTGAA ATCTATCTTGACAGTGTCAAGATCTAGATCTCATAATGTTGTCTTACTTACATCCTTCCATAGTTAATGAATTGCAGGTA TATATATAGTCTAATTTTCAGTTCTCTCCACTCCATGTGTAACTTGGAACTGTAATGGCGCTATTTGGTAGATGAATAAT GAATTTTCACATCTCTCCACCTCCACGAGCCACCTCGTGGAGAGAGATATGATAAGAAGAGAGAATTGAGAATAATGTAT TATTATTTGGCTCTCATTAACAATTTAATTAGTTCAACTAACAATGTATTATTATTTTGTCTTTTAACTGATGTCGTCAT CCGTTTGAGAAACAATTGTATGTGTCTGCCGACAAATGTCTTTTCAAGG
CDS sequence (LotjaGi3g1v0302200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGTGGCTGTAAGTTTGTGCAAATCTGCAGCTAACAAAGTTGTGGAAAAACTAAGCTCTCTGCTCAAAGAGAGATA CACCTTGTACCTCTCCTTCGAGGACGACCTCAAGAAGCTCCAAAGCGACTTGTCAGCTATCTCAGCAGTTCTTCATGATG CAGCAGAGAAACCAACAACAACGCAGAGCCACAGCGTTCAGGACTGGTTGGGGAAGCTCCATGACACCCTGCACGATGCA GAAGACGTGTTGGATGACATCAACGCTGAAGCTTTGAGGCAGAAAGTGGTGGCAGAATGGCGCTTCGTCACACTGGTTAG AAACTTGCTCTTCCTCTCTGGGATTGATGCTAGAATCAAGGATATTCGAGGGAGGATTGATGATATAGCGAAACAGAGGA ATAGTTTTCGCTTGCAGGAACCGGATCGTGATGGCGATCGCGATCGTGATCGTGATGTGGTTTTTACGCGAAGGCGGAGG GAGCAGGCGCGATTCGCGGAGGTTGTTGGAAGAGAAGGGGATCAGAAAGAGGTTGTGGAGCGGTTATTTGGAGGAGGTGA GGGTGTTTTTGCTGTTCCTGTTGTGGGAATTGGGGGTTTGGGGAAGACTGCACTGGTTGATTTGATTTTTGATGATGATA GGGTTAAGATGGGTTTTGATTTTAGGGTTTGGGTGGATGTGTGTGATGATTTGAATCCAGAGAGGATTAGGCACAAGAGA ATCACCAGAGCAGTGGACTGTCGCGATGAAAATGTCCCTGCCATGGACTTGTTGTCAAGCCTGGAGTATAAACTGAGGGG TAAGAAGTTCTTGCTTGTCATTGATGATGTTTGGAATTGTAATAGGGTAGACTGGCTTGTTCTGAAGAAATTGTTAGGAA ATGGGGATAGAGGAAGCAGGATTCTGGTGACGACGCGCTACAAAATCACTGCATCCATCATGGGTGAGAATAGGGGATTG TATGAGTTAGGTGGATTAGCTGACGGTGATTGTTGGTGTTTGTTTGAGAAATGGGCATTTGGGGAGGGAGAAAGTGCCTG TCATCCAAATCTGGCAAGAATAGGTCAAGAGATAGTGATGAAATGTGGTGGGGTGCCCTTAGCCATACGCACTTTGGGTG GATTACTGTCTGGAAGCAAAGAGGAATCTTATTGGTTGTCTGTGAGAAATAGTGATACTTGGGGTATTGGCCATATAGCT GAAAGTGAAGATGGTATATTGTCAGTGCTCAAGTTAAGCTATGATCAATTGCCATTGGGGTTGAAAGAGTGTTTTGCATA TTGCTGCTTACTTCCCAAAGGGAGAGAATTTGATAAGCAAGATTTGATCCACTTATGGATGGCTCAAAGTTTCATTCATT CTCCTGATCAAAGTGACCAACAACAATTAGAGGACATTGGGAGTTGGTATGTCAATGAGCTTGTGTCGAGATCTATTTTT GATGTCGTAAGAGAGAATCATAAAGGTGAAATAGTGGAGTGCAGGATGCATGATCTATTGCATGATCTTGCTAAATCAGT GGCAGAAAGCTTGATGGCTAGCTCCGGCACTACTGCAAATAACACCAGACACCTTTCATTGTGGGATACAGAAGTTCCAA CTTCATATCTCAATTTACCAAAGTTGAGAACACTTGTTTTGCACACCAAATGCTCAGAATCCGAATTGCACGCACTTTTA TCCGGCTCAACTTACTTGCGCGTGTTGGATTTGAGCCACTCAGGACTAAAACATGTGCCAAGTTGCATTGGTAACATGAA ACATCTGAGGTATCTAAATCTAAGTGGCAACCCTGACCTTCAGTCTCTTCCTGATTCCATTTGTGGGCTGCATTTTCTAC AGACTTTGAAGCTATCAGGGTGCAGAAGAATTAGCACATTCCCCAGAAATTTCAGTCACTTGGTTTCACTTAGACATTTG GTGATAACCACTCCATATGTTTGGGAGAAACAACTTGGGACTTTAACCTCCCTTCGGTGGTTAACAATTGAAAACTGTAG GAACCTCTTGTCTTTGACTGAAGTGACACAGCACCTCGTTGCCCTTCGGACACTGCGTATCCACAACTGTAGTAAATTAA CTTCATTGCCAAGTAGTTTGAAAAACTGCATTGCCCTTGAGGATTTGGAGGTTGTGAACTGCCCCAAGATGGAATCTTTG GAGATTTGCATGCAGGGTCTGTCTAGTTTTCGCTCTTTAACCATCAAGGGTCTACACAAGCTGACAACTCTACCCATGAA GCTTGAATTTTATGCGAGCAGTCTTCAGTACCTGATCATCATAGATTGCCTTAGTCTCATGAAACTGCCTGATTGCGTGG GGAATCTCTCATCACTGATGCGTGTACACATTAGATATTGCCCCAACCTGCAAAATTTGCCACATGGGTTCTCTCACCTT AGTGCTTTACAAGTCTTGAAAATTGATGGGTGTCCCCTTTTAAGCACAAGATGTAGGAGGAATGTTGGCCAGGATTGGCA ACAGATTGCTCATGTACGTGAAATCTATCTTGACAGTGTCAAGATCTAG
Protein sequence (LotjaGi3g1v0302200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVAVSLCKSAANKVVEKLSSLLKERYTLYLSFEDDLKKLQSDLSAISAVLHDAAEKPTTTQSHSVQDWLGKLHDTLHDA EDVLDDINAEALRQKVVAEWRFVTLVRNLLFLSGIDARIKDIRGRIDDIAKQRNSFRLQEPDRDGDRDRDRDVVFTRRRR EQARFAEVVGREGDQKEVVERLFGGGEGVFAVPVVGIGGLGKTALVDLIFDDDRVKMGFDFRVWVDVCDDLNPERIRHKR ITRAVDCRDENVPAMDLLSSLEYKLRGKKFLLVIDDVWNCNRVDWLVLKKLLGNGDRGSRILVTTRYKITASIMGENRGL YELGGLADGDCWCLFEKWAFGEGESACHPNLARIGQEIVMKCGGVPLAIRTLGGLLSGSKEESYWLSVRNSDTWGIGHIA ESEDGILSVLKLSYDQLPLGLKECFAYCCLLPKGREFDKQDLIHLWMAQSFIHSPDQSDQQQLEDIGSWYVNELVSRSIF DVVRENHKGEIVECRMHDLLHDLAKSVAESLMASSGTTANNTRHLSLWDTEVPTSYLNLPKLRTLVLHTKCSESELHALL SGSTYLRVLDLSHSGLKHVPSCIGNMKHLRYLNLSGNPDLQSLPDSICGLHFLQTLKLSGCRRISTFPRNFSHLVSLRHL VITTPYVWEKQLGTLTSLRWLTIENCRNLLSLTEVTQHLVALRTLRIHNCSKLTSLPSSLKNCIALEDLEVVNCPKMESL EICMQGLSSFRSLTIKGLHKLTTLPMKLEFYASSLQYLIIIDCLSLMKLPDCVGNLSSLMRVHIRYCPNLQNLPHGFSHL SALQVLKIDGCPLLSTRCRRNVGQDWQQIAHVREIYLDSVKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 10 | 131 | 122 | 5.61693E-14 | ||
| Pfam | 13 | 98 | 86 | 1.0E-20 | ||
| PANTHER | 40 | 780 | 741 | 1.2E-134 | – | |
| PANTHER | 40 | 780 | 741 | 1.2E-134 | – | |
| Gene3D | 156 | 318 | 163 | 7.8E-26 | – | |
| SUPERFAMILY | 161 | 428 | 268 | 1.14E-54 | ||
| Pfam | 172 | 415 | 244 | 1.2E-37 | ||
| PRINTS | 191 | 206 | 16 | 6.6E-18 | – | |
| PRINTS | 264 | 278 | 15 | 6.6E-18 | – | |
| PRINTS | 362 | 376 | 15 | 6.6E-18 | – | |
| SUPERFAMILY | 495 | 817 | 323 | 7.82E-48 | – | |
| Gene3D | 502 | 842 | 341 | 1.2E-50 | ||
| Pfam | 565 | 622 | 58 | 1.7E-8 | ||
| PRINTS | 584 | 600 | 17 | 6.6E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0302200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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