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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0317100 |
| Transcript ID | LotjaGi3g1v0317100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nudix hydrolase-like protein; TAIR: AT3G12600.1 nudix hydrolase homolog 16; Swiss-Prot: sp|Q9LHK1|NUD16_ARATH Nudix hydrolase 16, mitochondrial; TrEMBL-Plants: tr|I3T356|I3T356_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0317100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67137366..67145043) extracted from Lotus japonicus Gifu genome v1.2.
GCGTTTGTATGAACACAAACATTAACAACCAATGTAAAAAAAAAAAAAACATCATGCTTCAAATTACCTTTCATTCATCA TGATAAGCATCATATAAAAAAGTCATGGGTAAACATTTCAGTGTAAAATAGATTTGATGTTTAGTGTTTTATTTTTTCAA GAGAAAACTAACAAAAGAACAGAAAAGCTAGCTAGCTGCATCCGGATACAGAGATGTATGAAGGAGGCTGCTTCCAAACT TGAGTGCGAGTGCCACATCTTCTCGCTTCACGTGCTAAATAATTTGTTGCATGATTCCTCTCCCGGTTGATATGAAGGAA AATAGTACTTTGAAACTTCCCCATTATGCTCCTAATCTAACCAATAATATCCCTTCCCAATATGTGCCAACAGCTAGCAT TGACCACCTGCAATTAGTCACACGAGCACTCCACACGCTTGATATTGAGCTCCAAATCCAATGCATGCTTGAGACCCAAT TTAACTGCTTTGAGTTTTGCTATAAAAGCGTTGTCTGGTCCAGCACAGCACTCATGGATATCCCAGATATCCAATCCCCA ACACCATTTTGATAGACCACCGCGGAACCTATCTGGTTCATATGAGGATTCCAGTTGTCGTCAGTATGCATGCGCACAAC ATCGCCGGTGAGAGCATCTGAATTAGAGGGCAATACCGGTAAGACTAAAGTTGGAGTATAACGACCGTTCGGAGCATGAA TCCAACGCAGCGGAGTTCAACGATGGCACTTGAACAACGATTATCTCCTCAACTATTTGTTGCCGCAGAATTGTGTGCAA ACAACACATATCCACTTGCCATCCCTCCCTAAAAAAAAAGCCCACCTCCGATCCAATCTCTCTCACCCTTCACCGGCCAC CGACAAACCAGCCAATCACATCAACCCACGTGTCGCCACAGAATTGGTTAATCCATTCTGAAACCGTGCTCCTTCCACCA GGATATATATATAAACCTCCCCACACATGTTGACCCTAACCCACGTGACTTTGACCCATCCCTGATCCGTTGGAAGCGCT TCTTCTTCTCCTTCTCTTCTCTTCTCTTCTCTCTCAATCCAACCCTCATTGCATTCCTCCATTTTCGCTCTCTCTCTCTC TGCAAACCCTAGAAACACCGAATGTGCAATCGCAATCCATTGCAGGCGTAACCAGTAACGAAATCGCGCGCCGCCGCTGA CAATTTCCTTCAAATTTCATCCACAATTCCAATGGCGAATGAAGCATCGATTGCTTTCGTGATCGCGCGTGATTGAGGAA CCTGGGTTAGGCTGTTGCTTTGGTGGTGGCATTATTATGTCTGGTTTGGTTGCGCGTACGGGTAGGCATCAGCAGCGGTA CGAGAACGGTTATCGCCTTGTTGCCGGGTACATACAGCATTGCCTTTGCCCCCTTTTGGATTTTCTTTGTTTCGGTGGTG AATTTTGTTTAAGAATCGTGATTCGTGATGTCGTTTTCATGAATGTTCCATTTTCTTTGTTTATGTTGAGATGTCACATT CTTGTCTGGTTGATGGTGATGCTTAGTTTTGTTGTTATGATTATTTTTACTTTTGATTGAGAAAGATTGTTTCGTTTTTT TGTGGTGGTGGGTTAATTTTATCTTGATATAAATAATTAATTTTTTTCTGGTCTGGATTTGTCTGTATCTTGTAGCTAAA TAGATTGATTATCTAGGTAATTTATATGTGGCCCGCGCACTTAAAAGAGAAGAGAGAGCTCATTGTGTATAGGGTGTTTT GCAATAGGGGATTATAATCTAGTTTGTGTGGTGTATTGACTTTTGGTGCTTGTCATAATATATATAACCAATAAGGTTAC AATAAAGATTGGTCGACACCCGGTGGCAGAGGCAAGGGAGGATACACCCTGCCATGACTGCCTCAAGCTTTTTAATTTTC ATTTTTTCATATGTGAAACCACAATAGAGTAGACATGCTATATTATTTGAACTTGGCCCCCTGGTCTCTAATTTCTGTCT CCGCCATTGTAGACCACTAGAGAGGGATAGGAAGAGAGGAGAGATAAGTGGTAGATGTGATGTATGATTTGATGTGATCC GAAGGGTTAGATAGAGAGGGAAAAATAAGGGTGTCCCAAGGTGTATGTACTGTTTGGTGGTATAGATATCATTACTGAGA GGTAAATAGTTGTGTCAACTTGACTTTTTGGTACACATTCATTTGTTTGGGCTGGTAGTTTTGTGGGACCAACCAATTTG GTCCTGTATGGTTGTCTAATGGTTAACACTTCAAGAGTTTAGTTCAATATAGAGATCATGAGGCATCATGAATCTTGTAA ATAAATTACAGTATTAAACTTGAGCACTAGTGATGCATGAAATCTTGGAAATATCAACGGGATTTAGCATCCTTTTGGTT CAGAATTTAGATTCTGTGATGCATTGACTTACTTCTCTAGTCAGTGTTTATGTTCTTCTCCTCAGCATGTAATATTTTTA ACATCAACAAAGCTGCCAAATCATTTTATTGGCTTAACTGTAAATTTTAAATCCTTTGCTTTTTGAAGGAGTCTTGGTGG CTCTTGACTAAACCGATTGCTTAGGAGTTGTCTTTAGATTAGATTGATAATAAGTGACCTGAAAATGTAATTTTGTATGA ATATGATTGATTTGGAAAGTCATCCTATCCTAACTTCACTACAATTATAATTTCATTTGTTTAACTTTCCTTGTTTTTGT AGTTGGATTTAGGTTTGCAAGGATGTTATATTTGTTAACCTGGATGCAAACTCATTAGATTTGTAGTTATATAAGACGAT GTGTCTATTCACATACACTTCTCACTCCCACTGAACTATTTTTCATGTAGTGTATACAGCTTAGTTTTGTCATATCATCT TTTTTACCTTTTTGAATTGTAAAGTCAAGATCATTGTTTAATCCAAATAACTCAATTTCTAGACGTAATTGAATGATTAT TTGATACAGTCTCATAGGAACTAGTTACAATATGAATGTGGAATTTGTAAAAGTGGACTGAAAAATAAAAGGCTTATTAG CACTTTTGGTCCACCAGGTTTGTAAAATGTGCAAACGAAGTCCCTAAAGTTTAAAAATAGCATTCCGTTACCCCCACGTT TGGCTCCGTCAACACTTTTGGTCCCCCTCCATAATTCCGTCCAAAAACTAACGTTTTTGGCTGAGGTGGACTATTTTTAA ATGAGTTGGCCACCGATTAGGATAGAGAATGGTAGTTAGGAGAGAATCTAATTATTAATTCAATCCAATCTTATTTCTGA TTTTCCAGAATCATCTCTTCAGTCTTCTCCCCAAATTCTCCCAAACCTGCAATCTAACCACATTGATATGATCAAATTTT GATCTTCTTGTCCATGCCAATTGTTTCTCCCACAATGCAGGGTGAGACTAACGACAGATTGATATAGTGGCCAACAATGT TCTTCCCTTTAAACAAGATTGTAATATGCGTTGCTCATCAATGATACAAGAAGAGAAGCATCGGAATCTTAGATTGATTC TAAGAGCAAAAAGGATTCATCTCTTCCACTTCATCTTCATATCCCCATCTACAGAATCTTCTTGAACCCAGAAAACCTTT CCTCCTAATCTAGTGAGAAACCCAGAAATCAAACCCCCAAGCCCACAAATCCCCATCTTCTTCTTATTCCTCTCTATTCT TCTATGCAAGCACCTCCAGATTCTTCTGCTTTTTTTTTTCTTCTTCTTCCGATCCAGAAAAACCATTCAACCCATAAATC GACCTGCCCCAAACCTAGAAACCCAAACCCAAAAAATCAACCCATAAACCGTTGAACCCCAAAACCCCAAATCCAGAGAA AATCGGAACTCCAACCTAAAAACCCCCAATCCAAAGAAAACCGAAACTCCAACCTAAAAAACCCCAATCTAGAGAAGTAC TGAAGAAGGGTATAAAGGGCCGTTGATTTGGGGATTTTCCAAGAGAGAAGATGGATCGAGCAAGTTGGAGGTGATGGTTG AAGCAGGATTGAGCTCGGTGAGCATAGTTTGAAGTTTGAACCCATGAATACAGATCGGTTGGGTCGTAGTGAACGGTATC AGAAGCTCCGCCGGAAACGCCATCAACACCCCTGGAGCTCCGCCGCCGCACCCTCCACCGCGTCCCTTCTTCTTCTTTCC CCTGTTCCGTTTTTCTGCAACTCTTCTTCCTCTGTTACATGAATGAGGGATTTAAAAGTTAATTAGGGATTTAAGAGTTC TTTATAGTGTTTATTTTTAATTAAATGATTTTATTTTATTTTGTTTTAATTTGTAATTGTATATGTGGAATTTACTAATA GCCACTTCTAAGCTCATCTCTCCTATTCAGGTTCCACATCATTTAAAAAAAATCCACATCAACCAAAAACGTTAAAATTT TAACGGAAGTGTGGTGAGGGACCAAAACTGCTAACGGAGACTAACGTCGGGGTAGTAAAATGCTATATTTAAACTTTAGG GACTCCGTTTGCACATTTTTGAAACCTGGGGACCAAAAGTGCTAATAAGCCAAAATAAAAAGGTGGAATGTTGATATGTC GCTTGACTTATTTCATTAGCCTTTTAAGTGAGAAACTATTATTATGACAATCAAACATTTTCAGTTAGGAATTGAATGGA ATTTGTATTTGTTTCTTTTTCTTTTTATGTATTTTTTGGATATATATATATACTTAAATATCTGACCTGAAATGCTAATT GGTTGCAGGTGTGTTCCATTTAGATATAAAAGTTCTGATGATTGTGCGGACTCTAGTTCTGAGAAGATTGTTGAAGTGCT TATGATTAATTCACCTAGTGGACCAGGTCTTTTGTTTCCGAAGGTATAATATAACTTCTTTCTTAGTCCTATTCATTAAT TGGGATGATTGGTGCAGCCGTACAGCTTGCTTTTACTATATGAAAAATTTACAATTGTCATGTAAAATTCCCATTGGAAT TGTATTTTGCAAATCCAATGCAGTTTGAAGCTGTTGTCAAACTGCATTGGGAAGCTGTTTTATGCACTCACTGTACTGGG AAATTTTATAGCTGTTGTAGTTGGCTGTTCTTCTGCCTCTAATACTAATCCTGGTGGCTTATTGAGAAAAAGGAAAAAAA AGCTTTTGCATCTCTTGCTTGCTTGTTTTGATATTTCTTCATGTCAATGTTGTCCTTATAAATATATAAATGACATGCAC ATAGCTGTAGCATCATTACCATAATACCAATTAGAAAGAGGATTATTAAGCGAATGAGGTTATGCCTGATATTTTAGTTC TTTTCTTGGATTGATTGATGGCGGGGATAAAGGATTGGGAGAATTTGCAAGTTCCTGTTTTAAAGTGTCGACTAAAAGCA ACATGGCCTTTGGATTGCTCTAGTATCTTTGGTTTTAACTGCCTTTTTTAGCAAATACTTTGTAGCATGATACTATTGTA TTAAAAGATTATAAGTTGAATTGGAACTTGAGTTCAGAGATTCTGTATGCTTGATGGTTGTGCAGATGATATTGCCACTT CATAGTCAAATTTCCAAAAAGGCTATATGCCATTATTTGTTGAATATTGGGGGTTTCTAGAACACAATTGTCAAAGTGTT TATGTTAGGATTTTTATGCACATCATTCATTGTTTCTTAAATTAATTTAAAATAATTTTTCTTTATTTTGGTCTTTTGTA TGAGATGGTAAAATCAATGAGGTTCTGTTCTCAATATTACCATTGCGGAGGACAAATCGATTTACTATACATGTCTGAAT GTAAACAATAGCCATATATTGTAATAAAAGACTAGCTTTTAATCTCTTAAATTATCAGACCTTACTGAACTTATTGATGA GCCTTGCGACATCTTTTTTATTTTCGTTTTATGCTATTAGAGATGTGCGGTCTCTTTCTCAGCTATTATAAGTTACATGT AGCTTGTGCTGTCCGTTATGCTTTGGTGATTTGTCATGCTTGTTTTTTGACTAAGTTTATTACAGTTGGGGTCTCTGTTA TAGTTGGTTAGAGTAGGTAAAATATGAGGGCTTCTGCTTGAAGCTTCTCCTAGAGTATAAGCACTGGATCCCAATACTAA GTTTAATGGATTTCAGAATACAGATCTATACTTTATCTCTCTTTTTCACTCTTGCTCAACTTCTATCAGATGCTGTTTGA AAAGATTTTGCTGCCCTGTAATAATTTAGGGTCTGTTTAAAATATTTTGTGCTGCTTAGTTTTGCCGTGTTTATTTTGTA ACTTAGTCTGATTGAGATCAGTTGTCTTTTTTATCCTTTTTCTTTGAATGGTCCCTGAGTGGAGATGCCATTTTCTGATT ATTATGATGTTTTCCCATAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCAGCTGTACGAGAAGCTATAGAAG AAGCTGGAGTTCGAGGAGACCTACTGGTGAGCAACTTATCCACATATATGAATCCGTTTAATCTTTTACCTTTCTGTATA CAGTTCCAATGCTTCTTGAATATCTTGATGGATTGATGTATCTAGATGTTTTGATGGTTTTGTTGGGAGTAGTCTAGGAA TTTTTTGTGAAATCATATCTCACACTATTCCATGTTGTTATGACTATGAGTTGGTGACTGTTGGTAATTTGCAATGATGT TTTCCTCAATAATGTGACTTTATATCTGTGAGAACTCACAAGAATCCACATTTAACATTTAAAATGTGATGGACTTTGTA TAGAAGAATTCACATCATGTTTTTCAATTTATGCCAACATGTTTTTTTTTCAGCAAAAGTCAGTGGCATGACATGATTTT AGGGTCTTCTATGTGTTTTGGCATGTTCTTTTGATCCTTTCATTGTCGTGTCCCTTGAAATTCATTTCATACTATGATTC AGTTGATTTTACTATGAACAAGGCTGATGAATATTTTTACTTTGCCATATGATCCTGTAATTTGGATGGATTCTTGCAAA CTTATGGTTGAAACCTGCTGCTACTGGGTGTCAGAATTTTCTTGGGTACTATGAGTTTCGGAGTAAAACCCACCAAGATG AGTTCAGTCCAGAAGGGTTATGTAAAGCAGCAATGTTCGCCTTGTATGTGAAGGAGGAACTTGACTTATGGCCTGAGCAA AGTACCAGAAATAGGCGTTGGCTGGCTGTATCGGAGGCACTTGAAAGCCTCCGGCATGCATGGATGAGGGATGCACTGGA ATGCTTCTGTAAATGGCACGAAGATAAGCTGGGGGGAGTGGAACAAGAGGAGGATTTACCTGATCTAGACTGATTTGCTG ACTATTCATTTATAGGGGATAATTGTATCTTTTATAAAAATGTTACTATTGGGGTAGTTACTTTAGCAAAGATAACTCTG ATCAGAATTGCATAGATATTGTTTTAAGTTTATGGATTGATCTCTGGTTCTTTTAATTCAGAGATTCATAACTTTTGAGT TTAGTCGAGATGCGGATCAACATCCTCTTATATGAAACTGAAAACTTACATGGTATTATCATGTGGAAATTTTCTATCTC TATAATTATATATATTAAATAGGTAGGTGGGATCTTCTGAATTTATGTATGAAGAGAGAAATTGACACAATGTTTAACTT TGACATTTACTTGTAACATGAGATGATGATCTCTCGTGCTTTTTCTTTTAATTCTCATTAGAGAGAAATTGACACAAT
CDS sequence (LotjaGi3g1v0317100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGTTTGGTTGCGCGTACGGGTAGGCATCAGCAGCGGTACGAGAACGGTTATCGCCTTGTTGCCGGGTGTGTTCC ATTTAGATATAAAAGTTCTGATGATTGTGCGGACTCTAGTTCTGAGAAGATTGTTGAAGTGCTTATGATTAATTCACCTA GTGGACCAGGTCTTTTGTTTCCGAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCAGCTGTACGAGAAGCTATA GAAGAAGCTGGAGTTCGAGGAGACCTACTGAATTTTCTTGGGTACTATGAGTTTCGGAGTAAAACCCACCAAGATGAGTT CAGTCCAGAAGGGTTATGTAAAGCAGCAATGTTCGCCTTGTATGTGAAGGAGGAACTTGACTTATGGCCTGAGCAAAGTA CCAGAAATAGGCGTTGGCTGGCTGTATCGGAGGCACTTGAAAGCCTCCGGCATGCATGGATGAGGGATGCACTGGAATGC TTCTGTAAATGGCACGAAGATAAGCTGGGGGGAGTGGAACAAGAGGAGGATTTACCTGATCTAGACTGA
Protein sequence (LotjaGi3g1v0317100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGLVARTGRHQQRYENGYRLVAGCVPFRYKSSDDCADSSSEKIVEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAI EEAGVRGDLLNFLGYYEFRSKTHQDEFSPEGLCKAAMFALYVKEELDLWPEQSTRNRRWLAVSEALESLRHAWMRDALEC FCKWHEDKLGGVEQEEDLPDLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 10 | 164 | 155 | 4.33E-23 | ||
| Gene3D | 11 | 156 | 146 | 5.2E-30 | – | |
| ProSiteProfiles | 18 | 162 | 145 | 13.436 | ||
| CDD | 21 | 155 | 135 | 1.5769E-41 | – | |
| PANTHER | 23 | 181 | 159 | 2.2E-79 | – | |
| PANTHER | 23 | 181 | 159 | 2.2E-79 | – | |
| Pfam | 47 | 158 | 112 | 7.3E-15 | ||
| ProSitePatterns | 63 | 84 | 22 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0317100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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