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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0342200 |
| Transcript ID | LotjaGi3g1v0342200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7-dehydrocholesterol reductase, putative; TAIR: AT1G50430.1 Ergosterol biosynthesis ERG4/ERG24 family; Swiss-Prot: sp|Q9LDU6|ST7R_ARATH 7-dehydrocholesterol reductase; TrEMBL-Plants: tr|A0A0S3T0X2|A0A0S3T0X2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0342200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:71744341..71748882) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGGAAACGAAGAAGAGTGAAATTGTTCACTCACCACTAGTCACCTACGCTTCCATGATTTCTCTCCTCACACTCTG TCCTCCATTCGTAATCCTCCTGTAAGATTCGATTCGATTCGATTCAATCCATTTCATTTCACCTCAATTTCACAGATCTC ACTCACTTCGTCAATTTCACGCAGATGGTACACCATGACACTCGCCGATGGATCCATTTTACAAACATTCAACAACTTGA ACCAAACCGGCGTCAAAACCTTCTTCCTCCATTCATGGCCCAAACCCTCTGCAACCGCTTACAAAATCATCGCCGTCTAC GCCGCATTTGAAGCCGCGCTTCAGCTTCTTCTCCCCGGTAAAACTGTTCACGGCCCTGTCTCCCCCGCCGGCAACGTACC TGTCTACAAGGTCAACTATCACTTCTCTTTTCTCTTCTTCTTTCTAAACTTGATAGGATCAATGATTCAATGTTGTGTTG TTGTTTCAGGCGAATGGTGTTGCAGCGTATCTAGTGACTTTGATTACTTATCTTGGTTTATGGTGGTGCGTTTAATGTTT TCAAATTTCAACCCTGTTTGTTTGTCTCTTTTTGCATTTCTAGTTTGTTTACCACTATTAGCATGTTTATTAATTGCTGA AATGAGATTATGGTCCTTTATGATTAGTTGACTGGGGGAGATACTAGATTTGATTCATTTTATAATACATTCATCCGTTT CGAGCCGAAGAAAATGAGAATCGGGCGAAAATTTGACACACTATTCAGAATTATGAATTGTGAATCAAAAGAGACAGGAT GGATTTTTTTAGGGAGGCAAATACAACATTTAAATACGAGAGAAAAATTCTATTAGGGGTAATCATAGCATGTGACTCTT ACTTGGTCTTTGCTGTTGGTGTTAGTTGAGAGGAGGAAAGTAATGAAGTCATATAAAATTAATTTTTGGCTATGAATTAG AGATCTCAATTCATAGTAAGTATTCTGTGTTATGTTTGAAAATGCAACTTATGAATAAACTGATTGAATGTTTGCACAAA GATCAGCAGTTTTTATTACCCCTCCCCCTAAAAAACAGAGAGAGAATCAGCAAAGTAGATATAAATACATAATTTAGATG TTCACTGGGAACAAAACTTGGAATATTGGAGGCTATTTCACGTGTGTGATGGATATATTGGGTGAAACACAAAAAGGAAA AAGAAAAACAAAGCTGGTATCTCCAATTGATTATGGCTTTGAATTTTGTATCTTAATGAAGGTAGGCCTGTCCTGGTAAA GGCTAAAAAATAAAAAAAGTCCAAGTTAGTGTGTGTTCTTCTGTAAGAAATTTGTGTTACAATACAAGCTTTTCCTTCAA AGCAAGATTTTTCTTTTCACTTTTTTTGTGGAAGATGACTTGCGAATTTTGTATGTATTTTTCAGGTTTGGGATATTCAA CCCTACAATTGTTTATGATCATTTGGGAGAGATATTTTCAGCCTTGATCTTTGGGAGCTTGGTCTTTTGTGTTCTCTTAT ACATAAAAGTGAGACAGTGAAATAGGAGAAGTAAATTGTTTCCTATGATTTACATTCAAAACTTCTAACTAGAGTGTTAT GTTTGCTAGGGTCATTTGGCACCATCTTCCACGGATTCTGGTTCCTCGGGGAACATAATCATTGATTTTTACTGGGTAAA CTAATCTCTTCTTTTTACTTTGACTAAACAGTTTCAAAAAAAAGTTACGTGTTTATATACATTAAATGTTGAAAAAGATT GAAGAAAGAGAAAGTGAACGAGGAAATAATGTATAAATAAAAGTGAGGGGCAGCATGATAATTCTCCCAGTCTCCCCAGT CTGATACTTGTTGCTGTCATGCCTCTAGAGGACTGTTGATGCAATGAACCGTTCTTCAAAATTACTGCCTCTCTTATTCT AGACCAAGAAGGCATAGACAATGCATATAAAATTCTTTTAGAAAGTATCAATACTTTGTCCGTCTGGTCTCATTAAAGTT GCATCCATGATGCCAGTGTGCTTTGAAATTTTTCTTCTAGAAATGTTTCCATGTTTTATGATTATTATTACCATTTTCAC CATATATGAAGAAAATGCTTGAGAAATTAAAATTTTATCTGTTGGGACTTGTTTTTATAAGAACAATAACAGCCCAGGGT ATGTGGCAAATGAGACCTAACTTATAGCCATTCTTGCAGGGTATGGAGCTCTATCCACGCATTGGAAAATATTTTGACAT AAAAGTTTTCACAAACTGTAGATTTGGAATGATGTCATGGGCTGTTCTTGCACTAACCTATTGCATAAAGCAGGTTTAGT CTCTGTTTATATTCTTTGTATTAGTATTGAAGTCATTTAATATCAGATAATGTCTTCTTGTATCAGATCAAGCTAATGAT TGTAGTGTCCAACATTTAGTTGCCTTACACAGTTAGCTATCCTTTGATTACCTATTTGTAGTTTCTGATACTTCCTTGTA GAAACAGCACAAGCCTGGGGGCCTTGGTGGTTAGGTGACCCTGTAACAGAAGCTCGGGATCATCTACTTTTGTATTGTAT TGTCTTCTAAACTGTAATAAGATTTCATCTATGATTTTGGATATGAATCACGTTTATCTTTATGTGGGTTGACTTCCTTA GTTGCCTTGGATATAATGACTGTATGATGCTGACTTATCAACCTCCATAAATAAGATGTGATGATGGGTCCAGTACCAGA TAAATCTGGAATGTGTTATTTTTTGAATACTACTGTTGTATGATATATCCACCCTATGGTTAATTCTCTAATGAATGTGC TCTTGTCTTAATAGTATGAAGAAAATGGGAAAGTAGCTGACTCGATGCTTGTAAATACTACATTAATGCTGGTGTATGTT ACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACATGATCGAGGTATACACGTGCTTTATTA TTGTTTCTGTGACACACTTACTCTTTCCCATTGTTCTATCGAAGTATGAGTGGTTGTTAGGAAGACTAGTATTTTTTATC TTCAAGAAAAGAATGATCTCCAGTTTTCATGGATATAGACTATATCTTCCATTCCATGATATATATGATTGCTAAATTCT TTGCACACATCGTATTTAAACTTCTTTATCGTCTCACTAAATCTTAAAACACCTAAATCTGGCAGCTGGATTTTATATTT GCTGGGGCTGTTTGGTGTGGGTTCCATCTGTGTACACTTCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGC ACCCAGGTACAATCCCCATCCTGTTTGTGTTGCTGGTTTGTTATAGTTATACAGTGAGTGGGGAACAGAATGAAAAGATA GGGTTGAGTTGTTGAAGTGGTGTTGCCAGCAGATTTTTCCTTACTTTTAATATATATTATAATCTTTCCCCAATTTTACT GAAAGTTGTCTTTCTTTCTTGTCTTCCAGCTTGCTCTTTTTATCTTAGTGGCTGGCATTCTTTGCATATACATCAACTAT GATTGTGACAGGCAAAGGCAAGAATTTCGTCGGACAAATGGAAAATGCTTGGTCTGGGGAAAAGCTCCATCAAAGGTCTA AATTCATAGAATTTACTTATTTCATTTTCATTTGGAATGTATGAGATTGGAATACTTACATGAATATTTTCCAGTAGACT TACACAAGGTAACCATGATGAAAATGCACTTGCAGATAGAGGCCTCATATACTACTAGTTCTGGGCAAACAAAAAGAAGC CTTCTTTTAACCTCTGGATGGTAAGTTTTCACTTATAATTCTGTAAACACAAATGTGTGGCAACTATTGGGGGAGAATGG TTATTACTGGAGAACTGAGACCATACATGCCTCCCGTGATTGACGAGTTTAAGCTCACCATTTGTTGGGGCTGGTTCCGG ACATTTGATTTGAAGTATATTATGATTCCATTAAGTTGATGTTAATAGTTTATATCTAGGTGTGAATGTTATTTTTAACC ATAGGTGGCTTTTAAACTCAAAAGAGGCCTTGGATTTTGATATCTAATGTGACTAGAAGAAAACGCTTTCTGTCTTAGAA AATAACGGTTCACGTTTTTTTGAGTACCTGTAGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATACTAGCTG CTTTCTTCTGGACAGTGCCAGCTCTTTTCAATCATGTAAGGGTGTCTCTTTCTCTGAACAACAGTACAAGTTGAAAATTT GAGACAATATTAAGCTTAGCTTCTTTTTTCTGGTGCAGTTTTTACCTTACTTCTATGTGATATTTCTTACCATCCTTCTT TTTGATCGAGCAAAAAGGGATGACGATCGATGCAGATCCAAGTAAGCATTCTGTTATATCTTTTAATTGGTTTGCTTTGT GAGTTTTGACTTGTTAGTCGGATACAGTCTCCCATTTTTCTTATCAATAAGAAATGAACAATATACCACCAATCAACCAG GATTGGGCTGTTTCTGAAGTATACAAATCATTAGTGTAAACTGTAAAGCAATAGAATTTTAG
CDS sequence (LotjaGi3g1v0342200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGAAACGAAGAAGAGTGAAATTGTTCACTCACCACTAGTCACCTACGCTTCCATGATTTCTCTCCTCACACTCTG TCCTCCATTCGTAATCCTCCTATGGTACACCATGACACTCGCCGATGGATCCATTTTACAAACATTCAACAACTTGAACC AAACCGGCGTCAAAACCTTCTTCCTCCATTCATGGCCCAAACCCTCTGCAACCGCTTACAAAATCATCGCCGTCTACGCC GCATTTGAAGCCGCGCTTCAGCTTCTTCTCCCCGGTAAAACTGTTCACGGCCCTGTCTCCCCCGCCGGCAACGTACCTGT CTACAAGGCGAATGGTGTTGCAGCGTATCTAGTGACTTTGATTACTTATCTTGGTTTATGGTGGTTTGGGATATTCAACC CTACAATTGTTTATGATCATTTGGGAGAGATATTTTCAGCCTTGATCTTTGGGAGCTTGGTCTTTTGTGTTCTCTTATAC ATAAAAGGTCATTTGGCACCATCTTCCACGGATTCTGGTTCCTCGGGGAACATAATCATTGATTTTTACTGGGGTATGGA GCTCTATCCACGCATTGGAAAATATTTTGACATAAAAGTTTTCACAAACTGTAGATTTGGAATGATGTCATGGGCTGTTC TTGCACTAACCTATTGCATAAAGCAGTATGAAGAAAATGGGAAAGTAGCTGACTCGATGCTTGTAAATACTACATTAATG CTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACATGATCGAGCTGGATT TTATATTTGCTGGGGCTGTTTGGTGTGGGTTCCATCTGTGTACACTTCTCCTGGAATGTACCTTGTCAACCATCCTGTAA ATCTTGGCACCCAGCTTGCTCTTTTTATCTTAGTGGCTGGCATTCTTTGCATATACATCAACTATGATTGTGACAGGCAA AGGCAAGAATTTCGTCGGACAAATGGAAAATGCTTGGTCTGGGGAAAAGCTCCATCAAAGATAGAGGCCTCATATACTAC TAGTTCTGGGCAAACAAAAAGAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTG AAATACTAGCTGCTTTCTTCTGGACAGTGCCAGCTCTTTTCAATCATGTAAGGTTTTTACCTTACTTCTATGTGATATTT CTTACCATCCTTCTTTTTGATCGAGCAAAAAGGGATGACGATCGATGCAGATCCAAGATTGGGCTGTTTCTGAAGTATAC AAATCATTAG
Protein sequence (LotjaGi3g1v0342200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGETKKSEIVHSPLVTYASMISLLTLCPPFVILLWYTMTLADGSILQTFNNLNQTGVKTFFLHSWPKPSATAYKIIAVYA AFEAALQLLLPGKTVHGPVSPAGNVPVYKANGVAAYLVTLITYLGLWWFGIFNPTIVYDHLGEIFSALIFGSLVFCVLLY IKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLM LVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVAGILCIYINYDCDRQ RQEFRRTNGKCLVWGKAPSKIEASYTTSSGQTKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHVRFLPYFYVIF LTILLFDRAKRDDDRCRSKIGLFLKYTNH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | - | – | |
| PANTHER | 6 | 425 | 420 | 7.1E-241 | – | |
| PANTHER | 6 | 425 | 420 | 7.1E-241 | – | |
| Phobius | 14 | 36 | 23 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 37 | 71 | 35 | - | – | |
| Pfam | 46 | 422 | 377 | 1.3E-72 | ||
| Phobius | 72 | 92 | 21 | - | – | |
| Phobius | 93 | 112 | 20 | - | – | |
| Phobius | 113 | 132 | 20 | - | – | |
| TMHMM | 113 | 132 | 20 | - | – | |
| Phobius | 133 | 143 | 11 | - | – | |
| TMHMM | 142 | 161 | 20 | - | – | |
| Phobius | 144 | 161 | 18 | - | – | |
| Phobius | 162 | 264 | 103 | - | – | |
| ProSitePatterns | 176 | 191 | 16 | - | ||
| TMHMM | 201 | 218 | 18 | - | – | |
| TMHMM | 233 | 255 | 23 | - | – | |
| Phobius | 265 | 283 | 19 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 284 | 294 | 11 | - | – | |
| TMHMM | 293 | 315 | 23 | - | – | |
| Phobius | 295 | 315 | 21 | - | – | |
| Phobius | 316 | 368 | 53 | - | – | |
| Phobius | 369 | 386 | 18 | - | – | |
| Phobius | 387 | 391 | 5 | - | – | |
| TMHMM | 387 | 406 | 20 | - | – | |
| Phobius | 392 | 409 | 18 | - | – | |
| Phobius | 410 | 429 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Sterol biosynthetic process | The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0342200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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