Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0354200.1

Overview

Field Value
Gene ID LotjaGi3g1v0354200
Transcript ID LotjaGi3g1v0354200.1
Lotus japonicus genome version Gifu v1.2
Description Glycerol kinase-like protein; TAIR: AT1G80460.1 Actin-like ATPase superfamily protein; Swiss-Prot: sp|Q9M8L4|GLPK_ARATH Glycerol kinase; TrEMBL-Plants: tr|G7JGV7|G7JGV7_MEDTR Glycerol kinase-like protein; Found in the gene: LotjaGi3g1v0354200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:73588479..73592160) extracted from Lotus japonicus Gifu genome v1.2.

AAAAGTTGGTTAAATGGATAAACTTTGAATCGTCCATTTGGCTAGAAACATGGATTGACATTCGACATTCCCAAAGAAAC CGCATTTATAGTCAAACGTGATTAATATAAATACACCATCCATATTGCTAGTGAAACACAAAAACAAAAGTCTTCTATCT TCGTTGATCACGGACAATATACTACAACATCATCATCATCTTGATCTCAATCTCAAAACTCAGAGCAACAACAACAACAT AGAGACAAAAAAACCATGTCGAAGGATGATGTTTTCATTGGCTCAATTGACCAAGGAACCAGCAGCACCAGGTTCATAAT CTACGACAAATCAGCTCGCCCAATCGGATCTCACCAGGCTGAGTTCACTCAGTTCTACCCACAAGCAGGGTAAGAAGCCA TGATCACAACACCCCATGTTTGTTTTCTCACTCAATTTTCGTTCTTTTTACCAAAAAAATTATGGGTTTGTTGTGTTTTT TTAGGTGGGTGGAGCATGATCCTATGGAGATCTTGGAGAGCGTGAAGGTGTGTATTGCTAAGGCTTTGGACAAGGCTACT GCTGATGGGTTCAATGTGGATAAGGGGTTGAAGGCTATTGGTCTCACCAATCAGAGGGAGACTACTCTGGTTTGGAGCAA ATCCACTGGTGCTCCTCTTCATAATGCCATTGTTTGGATGGATGTTCGCACTGCTTCTGTTTGCAGGTCTTTCTTTTTGC CCTTTGCCTTTTTTGTGATTTTGATTGCTCTGGCTAATTGTATTGTTCAATTTGTATGTTTAAGAATTCAGTTCATTTAC AAATTGTGTGAAAAATTCATCTTTTGTTTATGTTAACTGTCACTCTTCACCAGATTTTATTGTAGATAATTTCATTTTAA GTGCTGTATTTCTAACTTGGAAAATGTTGGGTAGACCCCAATAGGAGTAGACACCCAAAGTGAGAAAGGAATGGAAGAGA TAAGTAATGAATGTGATATATGATTCGGCGTGATAAGAAATGAGAGATAGAGGAAAAAAATAGAATTTGGATCCTCTCAA TCCAAATCGCTCTCGATCCAAGATGTGAACTATTGATTTTAAATTAAATCCAATGGTCTAAAAGTTAATGGTTTAAACTC AACCTCGTGATCCAAGCCAATTGTTTAAGTGCCAAAATTTGTAAACCATTAGATTTCAAATCAACGATTCAGATCTTTGA TTGAGAGGATTCAAATTCGAAAAAAATGAGGTGTCTGAATTATTTTGTGCATGATAAGTATTTAGATTTTTATGTTTGAA TGGTGTTAATTCTGCCTCTGATTGATAGGGATCTGTTTGTAAAATGTTCTGATTAGGTCTATAATATAGATATAGAGTCT ATATCTATATATCCTGTACTTTGTAAGCGTATCCAGTTTATGTTAGTTCCATGTTTGAAGTTTGTTACTGTGTCATTCCT TTGTTGTCCCTTTTCCATTGTCAGAAATGTCATAGATGTCATTGGATCCTTTTGAAACAGGAGGCTAGAAAAGGAGTTAT CCGGTGGTAGAACCCACTTTGTGGAGAGTTGTGGTTTGCCTCTCAGCACATATTTCAGTGCTGTGAAACTGCTGTGGTTG ATGGAAAATGTGGATGCTGTCAAGGAGGCTATAAAGAAAAAGGATGCCCTGTTTGGAACTATAGATACTTGGTTGATATG GAACTTAACTGGTGGAGTGAAGGGAGGGTTGCATGTTACTGATGTTTCTAACGCATCCCGGACAATGCTGATGAATCTGA AAACGCTTGAGTGGGATGCAGATACCTTGAAAACCCTTGGAATCCCTTCTGAAATTTTGCCTAAGATTGTCAGCAACTCT GAAATTATTGGAAATGTTGCTACTGGCTGGCCAATTGCTGGTGTCCCTATATCTGGTTGTTTAGGGGATCAACATGCTGC AATGCTAGGACAAGCATGCCGCAAAGGAGAGGCAAAAAGCACTTATGGCACTGGTGCTTTCATATTACTAAACACTGGTG AAGGGATAGTTCAGTCAAAGCATGGTCTTCTATCCACCATTGCCTTCAAGCTCGGTCCGAAAGCTCCAGCCAATTATGCA CTGGAAGGATCAGTTGCTATTGCTGGAGCAGCAGTGCAGTGGCTTAGAGACAGTCTTGGCATCATTGCTAGTGCTCCAGA GATAGAGGCTCTGGCATTACAGGTTGAATCAACAGGTGGGGTTTACTTTGTTCCTGCTTTCAATGGATTGTTTGCTCCGT GGTGGCGTGATGATGCTCGAGGGGTTCTTATTGGGATCACAAGGTTTACGAGCAAGGCTCACATAGCTCGAGCTGTGCTT GAGAGTATGTGTTTTCAAGTGAGAGATGTTTTGGATTCAATGCAGAAAGATTCCTCAGAAGAGTCCAAGACAGATGAGTT TTTGCTAAGAGTGGATGGTGGGGCAACTGCTAACAATCTGTTGATGCAGATTCAGGTTTGGACTAACTGAACTTTTTCTT TAATCTAATTCTGTATGTTTCAAATTTTTTAATTTTGTTAAATATCATGTTCATTTTGTCATCACTATGATTATATGGTT CATAATGCTTCTTTTATGTTAGTGTTTTTTTCTTTCAAGTTCTGCATAACTCATTTTTATATGAAAAGATGTTTGTATTG GGTGATTGGCCATTGAAATGTTAGTGCGTGTTTGGTTTTCTATTCTGGAACTCCAGAATCAATTCTTAATGAAAATATTG ATGTTTGATGCAAAAGCTTTGTTACTTTTGACATGAGTGATAAATTTTTGTCAATAATGTTTCACAGGCAGATTTGATGG GAAGCTCAGTAATTAGACCTGCTGATATAGAGACAACTGCTCTTGGAGCAGCCTATGCAGCTGGGTTAGGTGCTGGGATT TGGAGTGAAGATTTTCTTTTCGATTCTAAGGAGAAAATGAAGAATGCTAATGTTTTCCGTCCAACAATGGTGGAGGAAGT GAGGAAGAAGAAAGTGGATTCTTGGTGCAAAGCTGTTAGCAGAACATTTGACTTAGCAGATCTTACTCTTTGATTGTGTC TTCGCAATTAATTTTTTTCCACATCCTCTATTTATGACTACACTTTTTTATCTTTTAGTCTTGGTCACTAAAATAAAGTG AATAAGTATGTCAATTGTCAAATAAATTTGACCTTTTGTTTTCTAATTTGTTCCTTATTTTCCTTGTGTTTGGGTAGGAA AATATGCATTGTCTAGAAAGAAAATGAGAATACATGTGTGAGCTCTGTAATGATCTTTTCATAGCATCTTTGGATCAAAC TTATTTTTCCTCAATCAGTTATGAGTTCTATTCACTTAAGCTTCTCCCCAAAATTGATTTTGTCTTTAAAATCAATTGTC GAAGGACTTTCATACATGCTATCATTACTGATCCAACAAGACATGGTAAAACAAACGGAACGCCCCCTCTCCCAAATAAA AGAATTATTTAAATATTTGATTTTGACATTACGAAGCTTTAATAGAGGAGGAACAACTTTTCTAGGTGGAGCTATGATTA GTTCTTGTACTTCAATATCCAGTTTCCCAGTATTAGAATGTTGTTAGAATTTTATTCTTCTTTTCCTATCTTTTTTTTTT CAAGGTTTTCCCTTCAAAGTTTTGGTACAACATCTTGGATCAACATTATATACTGAGCTGAAAAATAATATGATCAAGAC TG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0354200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGAAGGATGATGTTTTCATTGGCTCAATTGACCAAGGAACCAGCAGCACCAGGTTCATAATCTACGACAAATCAGC TCGCCCAATCGGATCTCACCAGGCTGAGTTCACTCAGTTCTACCCACAAGCAGGGTGGGTGGAGCATGATCCTATGGAGA TCTTGGAGAGCGTGAAGGTGTGTATTGCTAAGGCTTTGGACAAGGCTACTGCTGATGGGTTCAATGTGGATAAGGGGTTG AAGGCTATTGGTCTCACCAATCAGAGGGAGACTACTCTGGTTTGGAGCAAATCCACTGGTGCTCCTCTTCATAATGCCAT TGTTTGGATGGATGTTCGCACTGCTTCTGTTTGCAGGAGGCTAGAAAAGGAGTTATCCGGTGGTAGAACCCACTTTGTGG AGAGTTGTGGTTTGCCTCTCAGCACATATTTCAGTGCTGTGAAACTGCTGTGGTTGATGGAAAATGTGGATGCTGTCAAG GAGGCTATAAAGAAAAAGGATGCCCTGTTTGGAACTATAGATACTTGGTTGATATGGAACTTAACTGGTGGAGTGAAGGG AGGGTTGCATGTTACTGATGTTTCTAACGCATCCCGGACAATGCTGATGAATCTGAAAACGCTTGAGTGGGATGCAGATA CCTTGAAAACCCTTGGAATCCCTTCTGAAATTTTGCCTAAGATTGTCAGCAACTCTGAAATTATTGGAAATGTTGCTACT GGCTGGCCAATTGCTGGTGTCCCTATATCTGGTTGTTTAGGGGATCAACATGCTGCAATGCTAGGACAAGCATGCCGCAA AGGAGAGGCAAAAAGCACTTATGGCACTGGTGCTTTCATATTACTAAACACTGGTGAAGGGATAGTTCAGTCAAAGCATG GTCTTCTATCCACCATTGCCTTCAAGCTCGGTCCGAAAGCTCCAGCCAATTATGCACTGGAAGGATCAGTTGCTATTGCT GGAGCAGCAGTGCAGTGGCTTAGAGACAGTCTTGGCATCATTGCTAGTGCTCCAGAGATAGAGGCTCTGGCATTACAGGT TGAATCAACAGGTGGGGTTTACTTTGTTCCTGCTTTCAATGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGAGGGG TTCTTATTGGGATCACAAGGTTTACGAGCAAGGCTCACATAGCTCGAGCTGTGCTTGAGAGTATGTGTTTTCAAGTGAGA GATGTTTTGGATTCAATGCAGAAAGATTCCTCAGAAGAGTCCAAGACAGATGAGTTTTTGCTAAGAGTGGATGGTGGGGC AACTGCTAACAATCTGTTGATGCAGATTCAGGCAGATTTGATGGGAAGCTCAGTAATTAGACCTGCTGATATAGAGACAA CTGCTCTTGGAGCAGCCTATGCAGCTGGGTTAGGTGCTGGGATTTGGAGTGAAGATTTTCTTTTCGATTCTAAGGAGAAA ATGAAGAATGCTAATGTTTTCCGTCCAACAATGGTGGAGGAAGTGAGGAAGAAGAAAGTGGATTCTTGGTGCAAAGCTGT TAGCAGAACATTTGACTTAGCAGATCTTACTCTTTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0354200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSKDDVFIGSIDQGTSSTRFIIYDKSARPIGSHQAEFTQFYPQAGWVEHDPMEILESVKVCIAKALDKATADGFNVDKGL KAIGLTNQRETTLVWSKSTGAPLHNAIVWMDVRTASVCRRLEKELSGGRTHFVESCGLPLSTYFSAVKLLWLMENVDAVK EAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLEWDADTLKTLGIPSEILPKIVSNSEIIGNVAT GWPIAGVPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGIVQSKHGLLSTIAFKLGPKAPANYALEGSVAIA GAAVQWLRDSLGIIASAPEIEALALQVESTGGVYFVPAFNGLFAPWWRDDARGVLIGITRFTSKAHIARAVLESMCFQVR DVLDSMQKDSSEESKTDEFLLRVDGGATANNLLMQIQADLMGSSVIRPADIETTALGAAYAAGLGAGIWSEDFLFDSKEK MKNANVFRPTMVEEVRKKKVDSWCKAVSRTFDLADLTL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.420.40
2 263 262 2.4E-103 –
PIRSF
PIRSF000538
5 517 513 8.8E-149
IPR000577
PANTHER
PTHR10196
7 513 507 3.9E-241 –
PANTHER
PTHR10196:SF69
7 513 507 3.9E-241 –
TIGRFAM
TIGR01311
7 511 505 3.2E-216
IPR005999
SUPERFAMILY
SSF53067
8 265 258 4.63E-82
IPR043129
Pfam
PF00370
8 262 255 8.5E-72
IPR018484
ProSitePatterns
PS00933
143 155 13 -
IPR018483
Gene3D
G3DSA:3.30.420.40
264 513 250 2.5E-81 –
SUPERFAMILY
SSF53067
265 511 247 9.5E-70
IPR043129
Pfam
PF02782
270 465 196 1.4E-57
IPR018485
ProSitePatterns
PS00445
373 393 21 -
IPR018483

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004370
Molecular function Glycerol kinase activity Catalysis of the reaction: ATP + glycerol = sn-glycerol 3-phosphate + ADP + 2 H(+).
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0006072
Biological process Glycerol-3-phosphate metabolic process The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0354200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…