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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0354700 |
| Transcript ID | LotjaGi3g1v0354700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | alpha/beta-Hydrolases superfamily protein; TAIR: AT1G52510.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q93K00|DHMA_MYCAV Haloalkane dehalogenase; TrEMBL-Plants: tr|A0A151RMT1|A0A151RMT1_CAJCA Haloalkane dehalogenase 2; Found in the gene: LotjaGi3g1v0354700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73650165..73655210) extracted from Lotus japonicus Gifu genome v1.2.
ATTATTTTCCTTTTCATAGATCAGGGAGCAATGTTTTTCAATTAAATTTTAGAAAATACAATGGATATTATATGAGGACC ACGTTGAAGTAAACACATGAACCGCAATTTATGAAGCATCAAAAGGAGGAAACAAAAAAGAACAAGAAAAACAGTGGCCA GTTTTGTTGAGTATGTTCTGTTCAACTTGAACCGTTGAAGCTCTCTGTCTTGCAGCAATTCCATCCCAAAAATGGTGTTT TCTGCAGTGTTCTCTCCCACTCTGAACCTCTCAGTGTCTTCCACCACCAACTGTTGTAGAAGAAGACCATTATCCACCAC CACCACCAGAGTGACTATCAGAGCTAGCTCCACAGAGAAGGGTGAATCCAAGGACAATGATTCCCCAGCATTCAACCCTT TTGGCTTTGTCACTGACAACCCGTCAAGCAGAAGTGCTATTCAACTTCCTGAAAACCCTGCTGAGGATGGCAACGTTGGA CAAATGCTAAATGTAACATTATTTTCCTCCTTATAATCCACTGGTTTCAATAACTTATTCCTTTTTTTATGTTTTCTTCT ACTGGAGTTTGTTCTTTCTTTTGAGTGGTGAAATTAGAATTTCAGTTGTTTGTGCGTGATAATTATGCATGCAATTATAT AATTTTGTCTGTGCTTACTTGTGATTCTAAATAGTGTTGATGCTATTCATTAAGTGGTGGGAGTGTTGTAATAGTGTATT GATTTGTGTGTTCCTAGAGGACTGAAGGCAAGGGAAAGGATTTCGGGTCATATGTTAAATCTGGGAAGTTGAGATGGTTT GTGAGAGAAACTGGTATTATTTCTTTGCTGGAAAAGTACTTACTTTCCTCTCTATTTTTCATCCTCAAGTTTAGTATATG GTATCTCCTTGTTTTTTCCTTTTTTTTTCCAGGATCAGCAGAAAGCAGAAGAGGAACAATCGTCTTCCTTCATGGGGCCC CAATGCAATCTTTTGGTTACCGTGTTGTTATGTCTCAGGTTATCCTGCTACATGGATCTATTTTGTTTATGTTTCATTCA ATTTCATTTTATTTTTAACAATCGGAATAATGAAACTTAATGTGATTCAATTCCATTACTTCTTTTAATCCGGACATGGC CTCATATTCATAACATAGTAGCTAAAAATGGTATGTTGTTAAAGCTAAAGCATTCTTAGAAGACATATAGCATGTTTGGA TCGACTTATTCTTCCTCATAATCAATCCTGACAACAAAAAGCTAATCACATAGCTTCTCCCCGGAATTGATTTTGGCTTT AGAATCAATTTTAGAAAGAGTTCCAAACATGCACTTATTCTTTATTCCTTTCTTTCTTCAGATCATCAACAGGTCTGAAT ATGTTTCTCTAATAAAAAATTTAATAGTCTTTGTTGTCATGATATTATCCATCTAATACTTGATGCTACATCTTTTCTAT AGTTAATTATCAATTTGATTGTACATCTGTTCATTAAATGTTAGTAATTGATTTTCCTCCCCATAAACAGTTGGCAGATG CAGGGTTCCACTGCTTTGCACCTGACTGGATTGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTAATTAC ACAGGTTTTATTTATGAATGAGCTCATACCATGATCAGTTTTTCCTGCAGAAACATCATACTTACAAACGTTGTTCTTCC AATTCTTATAGAAAAGGAGTTCCATGACGCCTTGGATAATCTGCTTGAGGTGTTGGAGGTCAAATCTCCACTTTTCCTAG TTGTTCAGGTATCTAAAGAATGAAGAATAAAATCTGTGGTAGAATTTCTCGTATTGAAATTTCAATGAATTGAGTGAAGT ACTGCAATATACTCACATCGCTGCGGTGAACCTCAGAATGTAGTGAATACTCTAGTTACATTTTTGTGAACTCCTTATTA ATTTCAGTGTCTAACATGTAGTCACACTTCTTCTTAAGGGATTTCTTGTAGGCTCATATGGACTGACTTGGGCCCTGAAG AACTCAAGCAGGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAGTTTCATCTGTCATTCCTGGACTATTTCAGCA GCTAAGGTTTAGTGCTTATAGTACCAATTGATGCATCACTAACTTCATAGATAAAGATGTTAGTTTTGATCTTGGTTCTT GTATTGTACTAACTCCCTTGATTTTCTTTTTCTTTCTAGATTTCCTCTACTTGGTGAATTTACATCCCAGAATGCTATTA TTGCTGAGCGGTTTATTGAAGCAGGTAGCCCGTATGTATCCAAAAGTTCATTTGACTATTGGCTGCTAAATTTATAAATT GAAGTTGTAGTCCGCAACTTATAATGTCATTTTAACCATGCTAAACAAATTCTTGCATAGCTTTTCCATCTCTAGTTCTC TACAGAGACCTTCCTATGTCTTCCTTTATAAATATACTGTAAACCTAGTTCATACTAGATTTTAGAACTACTTTCAGAGA TAAGGGATAGACTTCGCATAAGTGATAAGGAATCAACACCCTGGTCCTTTATTTAATGCATCTCTGAAAGACATGGAAGT GATATCACAAATTTAGTGCATAGAGCATACAGTACACATAGTCACTCATTGTTGTTTTGTCTTCACAAAACCACTGGAGT AAAAAAAATTCCCAAAATTTCATGTTAAAGCATTAAAATGTGAACTGATATGATATAAAAACCTAAAAATAATAATATTA TAAGGTGCTTGATCTAATATATGTCTCATTTTGCAGTTATGTTCTAAAAAATGAAAAAGCTGATGTGTACCGACTACCTT ATTTGTCAAGCAGTGGACCTGGATTTGGTAAGTGACATCCTTTTGACGAGAATGAATCCCCTCATGTCACATTACATCAT CCTCATGCTACGTAGGGTTTCACCTATTTAATATATATGGAGAGAGAGAAAGAATTTTAACATGGGAATTGTGAAACTCC ACATAAGACGATCCTAATCCCCTTTTGATGCTTCAATTTTCTGCATGTATTTGTTTTTCTTAGTGGGGGAAAAATTGTTC ATAGAACACCTATGTATATGTTTATTGGAGGAATATCAGAGAAGTTACTTGGTGCTAAGTTACAGTTTATGTCAATGAAA ATTTATTGTTCCATAATTTTACATTCTGCTCTCCTCGTATCTATTGAAAGATATTTGATGTATTCAGTTTGGTCCCAAGA CATTCTGTAATTTACTCATGACACAGATTTCTGGAATGAACTTGAGTGAAACTAATTTTGCTTAGTCTTAGCAGTAATCA AGTTTCTGGTGTTGGATTTCAGCTCTTCTTGAAGCTGCAAGAAAAACTAACTTCAAAGGTACTTTCAGTGAAATATCAGA AGGATTTGCAACTGGAAGGTACGTATATATACTGAATTTGAACCCTAAGAATTAATGACTTTTTTTTGGGGAATTGATAA GCTGTGCTTGATAGAGAAGGTTGGGGAAAACACCTAAATTGCAATTGTAGCCCTTACAGGAAAATGACGTTTATTAGTTA AATGACAGATTGACAGTTATATGTAGGGAAATTGGAGCATTTTTAATGCAAATGAAATATTCAGTATATACTCATTTCAA ATATTTTATTTAACTCAAGGATCATAAATAACTAAATCCTCTTACTAGATAATTGGTGCAGAAACTTAAACAGCTTTTTT TAGTCTATGTGACTCTTTCCCTGTATTGGTTTTTTTCAAATCTAATTCAACATCAAGTCTTGTTTGATATTTATTAGTTA TGATGCCAAATAATGTATATGTTCCTTGGTTCAATCCTGCATATGTTCCTGCTTTTACTAACAATTACAAACATAGACTT GCTTGCAAAAGCTTTTGTGACATGAATTTTGATTAGTAGAGAAAGCATATCCATAACTTTTTATGTGAAGAACTCAGTGT TCAATCTCCAAATCCAGTTTGTGGGAAGGGGATGGAAAATCAAAAACATATCTTGAACCTGCAGTGGTAAACTGGTTTTG TAATTTGTACTTCAGATGGGATAAACCAGTAGTGCTTGTTTGGGGAATATCAGACAAGTACTTGCCCCAGTCTGTGGCAG AAGAGTTCCAAAAAGGAAACACAGAACACATCAAGCTTAAATTGATAGAAGGAGCTGGGCATATGCCACAAGAGGACTGG TGAGTGACATTAACATATGATTCAAATGCAGAGAAGTGTGTTTTATTGAATCTGTTAAGGATTGTCCTTTATATTTTTGA CAGGCCTGAGAAAGTTGTTGAGGCTTTGAGGTTCTTCTTCTGATTCAGCAACTTTCTGATTGAAAGGGCATTCCTGAGTT CTTTCTGAAATTGTAAATTTAGTGTCTCAATTTTTTTACACTGGGCAACTAATAAAATTCTGGTCTTGTTGAAATGAATC TGTTCTCCATGCCCTAATAGAAAATGAAATGACCAGGTAGCTTTAGCAGAAATGACATAATATTATCCTTCATTCCTTTT TTTTTTATTCAAATTAAGGATGAGTAAATGTAGATCGAAAGGGGAAGTCTGGATGCCAATCTTTTATATAGTTCATTGGA AAAGTGATGGAAGAGAAGTAATGCTCTTGCCAGTGAAACCGAAATTCCATCTTCTATTTCCAAACAATCAATTGTGTAAG AAACACATGGATGAACTTACCATTTCCATCAAAGAATCAAAGGACATTGATGGTTGGATGGGGTGGTCAGGTGACTAACC ATGCACAAATAACTATATCTGGTCAGGCATACTCCTCAACCGTCATGGGGTGGTCGGATGACCAGTGACTGACCATGCGG CGGAGGCAGGAATTTTATTGGGGGGGTGACGAAGATTTAAAGGAAGGTAATTTATAAAAAAAAATTTACTTTAGGTAATT TATAAGAAAATTTTACTTTTTCTCATAAAGCATGTGCAAAAAAATCATATATAACTAACAGTTTTTTTATAAGCATAAGA AATATATAATTAGTTTTAGTATAATAGATACTAACCAGCTCATAAGCATTCTGAGAAGAAAAAAAAATCAGACTTCACAA AAAAAG
CDS sequence (LotjaGi3g1v0354700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTTTCTGCAGTGTTCTCTCCCACTCTGAACCTCTCAGTGTCTTCCACCACCAACTGTTGTAGAAGAAGACCATT ATCCACCACCACCACCAGAGTGACTATCAGAGCTAGCTCCACAGAGAAGGGTGAATCCAAGGACAATGATTCCCCAGCAT TCAACCCTTTTGGCTTTGTCACTGACAACCCGTCAAGCAGAAGTGCTATTCAACTTCCTGAAAACCCTGCTGAGGATGGC AACGTTGGACAAATGCTAAATAGGACTGAAGGCAAGGGAAAGGATTTCGGGTCATATGTTAAATCTGGGAAGTTGAGATG GTTTGTGAGAGAAACTGGATCAGCAGAAAGCAGAAGAGGAACAATCGTCTTCCTTCATGGGGCCCCAATGCAATCTTTTG GTTACCGTGTTGTTATGTCTCAGTTGGCAGATGCAGGGTTCCACTGCTTTGCACCTGACTGGATTGGATTTGGTTTCAGT GACAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGACGCCTTGGATAATCTGCTTGAGGTGTT GGAGGTCAAATCTCCACTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGCTCATATGGACTGACTTGGGCCCTGAAGAACT CAAGCAGGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAGTTTCATCTGTCATTCCTGGACTATTTCAGCAGCTA AGATTTCCTCTACTTGGTGAATTTACATCCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGCAGGTAGCCCTTATGT TCTAAAAAATGAAAAAGCTGATGTGTACCGACTACCTTATTTGTCAAGCAGTGGACCTGGATTTGCTCTTCTTGAAGCTG CAAGAAAAACTAACTTCAAAGGTACTTTCAGTGAAATATCAGAAGGATTTGCAACTGGAAGATGGGATAAACCAGTAGTG CTTGTTTGGGGAATATCAGACAAGTACTTGCCCCAGTCTGTGGCAGAAGAGTTCCAAAAAGGAAACACAGAACACATCAA GCTTAAATTGATAGAAGGAGCTGGGCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGAGGCTTTGAGGTTCTTCT TCTGA
Protein sequence (LotjaGi3g1v0354700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFSAVFSPTLNLSVSSTTNCCRRRPLSTTTTRVTIRASSTEKGESKDNDSPAFNPFGFVTDNPSSRSAIQLPENPAEDG NVGQMLNRTEGKGKDFGSYVKSGKLRWFVRETGSAESRRGTIVFLHGAPMQSFGYRVVMSQLADAGFHCFAPDWIGFGFS DKPQPGYGFNYTEKEFHDALDNLLEVLEVKSPLFLVVQGFLVGSYGLTWALKNSSRISKLAILNSPLTVSSVIPGLFQQL RFPLLGEFTSQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEGFATGRWDKPVV LVWGISDKYLPQSVAEEFQKGNTEHIKLKLIEGAGHMPQEDWPEKVVEALRFFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 192 | 192 | - | – | |
| MobiDBLite | 27 | 55 | 29 | - | – | |
| PANTHER | 69 | 373 | 305 | 8.4E-82 | – | |
| PANTHER | 69 | 373 | 305 | 8.4E-82 | – | |
| Gene3D | 93 | 374 | 282 | 3.2E-42 | ||
| SUPERFAMILY | 98 | 374 | 277 | 1.28E-41 | ||
| Pfam | 122 | 369 | 248 | 1.3E-14 | ||
| PRINTS | 126 | 144 | 19 | 1.4E-7 | ||
| PRINTS | 146 | 161 | 16 | 9.7E-7 | ||
| PRINTS | 146 | 161 | 16 | 1.4E-7 | ||
| Phobius | 193 | 211 | 19 | - | – | |
| PRINTS | 210 | 223 | 14 | 9.7E-7 | ||
| Phobius | 212 | 374 | 163 | - | – | |
| PRINTS | 319 | 333 | 15 | 9.7E-7 | ||
| PRINTS | 351 | 373 | 23 | 1.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi3g1v0354700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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