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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0355900 |
| Transcript ID | LotjaGi3g1v0355900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT1G80100.1 histidine phosphotransfer protein 6; Swiss-Prot: sp|Q9SSC9|AHP6_ARATH Pseudo histidine-containing phosphotransfer protein 6; TrEMBL-Plants: tr|A0A0B2S001|A0A0B2S001_GLYSO Histidine-containing phosphotransfer protein 6; Found in the gene: LotjaGi3g1v0355900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73773772..73775472) extracted from Lotus japonicus Gifu genome v1.2.
GGAACTGAAGATGAAGAAGAATAATCAATGCGGTCCAAGGCTTTAAATAGCACTGCCATTCCCGCGGCAACAACAACAAC AACAGGAACATATAGCTGGAAACACAAACCTCTATAAAACCCTGAACAAAACACATACACCACTCCTCCACATTGTACAC ACTTGCTCTTCGTGGTCCTTGACACTCTCAAAACAAACTCTGATCAATCATTCTTTTTGTGAGCACTGGTCAATTGAGTT GATCAGGTCACTCTCTCAGTCAGCCAAAACGGGTCTCCCTCTGTGGTTGCTTGGCCTCGGTGCGGACCTCTTGTGGGCCG ACATGAACCGCCTCCTAGCCTTTCTCTTTCACCAGGGAGTCTTGGATGAACAATTCTTGCAGCTTCAGCAGCTGCAAGAT GAAAGCTCCCCAAACTTCGTCTCAGAAGTTGTCAACATTTATTTCCACGAGTCCGAGAAGCTTCTTAGGAATCTCAGAGC ACTCCTGTATGTAATCAACTCTTTTCATTTTCTTGTTATGCATTTCATACAATTAACTTGTGAATTCTCTTTAACACAAT GTGTCTATATATATATGGTGCAGGATGGAGAGGGAGTTCTCAGACTATAAGAAAATGGGGATCCATTTGAATCAATTCAT GGGTAGCAGCTCCAGCATTGGTGCCAAGAGAGTCACAAATGTTTGTGTTGCCTTTCGTGCCGCTAGTGAACAGAACAACC GTACAGGGTGCGTGAACTGCCATCAAAAGCTTCACTACCCCCTCTAAATCTGTGCATACATACTTCTTTTTTCACACACT CTGCAGTGAATCATTTTCTGCAATTTATTAGTGCGTGTATGCCCAATTTCAGATGCTTGCGAGCGTTGGAGATGCTGGAG CATGAATATTGCTATCTCAAGAACAAATTGCATGAACTATTCCAAGTAATTCCATTACACTATCTATTATTATTAGGAGT TTGTTTAAATGACTTTTGATAAAGTTTGAGTTAAATCACTCTAGTACGTCCTAAGACGTGACAATTTAGGGTACATTGTG TTTACTATATGGTAATGTGCAGATTGAGCAGCAACGTGCTTTGGCAGCAGGAGTGAGGTACCCCGTAGTGCAAAATCAAT AAAGCAAAGTGAAATGTTTGATTGAATTTTTTTCACTATTTTCCTTTTGAAGCCTTTCTGGTTCTGGTTTCGTGAGCCTA ATGGCATGCTTTCTGGTTTTAGACAAACCAAGCGGTAGCCAACTTTTGTACTGGCTTGTGTAGGAAATAGGAAAAAGGGG GGGTCACTGTCTCTGGTGTTTTGTATTCTCTTTATATACGTAGTGGCACCATGTTCTTTCTTGCAGTCTGCTTTAATTGC TGTAAGCCTGTTCACTTTTTCTAACCAAAGTGGATCAAATCTATTGAAAGTTGCTAGTGCTTTGATTCATAGTACCATTC TTAGAAATTACTTTTGGTTTGTATTTTAGCTAGAGAATTGGAATGAAGAGAGTAAAGAAGAAGGAAAAGGATGCAACTAA ACTAGGAAATCAGCAAGTGTGAAAAAATTGTCTTGATCATATAAATATTTAGGGTGTTTTGGATTCAAGTTGAAAGCATA TGTAAGCCAACGAAACTAGTAAAGGGTCACTCTCACCATTTTCTCATATAAAATTTGTGATTTTGTGTTAAACTTATTAC ATATGTATATGAACAGCAAAG
CDS sequence (LotjaGi3g1v0355900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCGCCTCCTAGCCTTTCTCTTTCACCAGGGAGTCTTGGATGAACAATTCTTGCAGCTTCAGCAGCTGCAAGATGA AAGCTCCCCAAACTTCGTCTCAGAAGTTGTCAACATTTATTTCCACGAGTCCGAGAAGCTTCTTAGGAATCTCAGAGCAC TCCTGATGGAGAGGGAGTTCTCAGACTATAAGAAAATGGGGATCCATTTGAATCAATTCATGGGTAGCAGCTCCAGCATT GGTGCCAAGAGAGTCACAAATGTTTGTGTTGCCTTTCGTGCCGCTAGTGAACAGAACAACCGTACAGGATGCTTGCGAGC GTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCATGAACTATTCCAAATTGAGCAGCAACGTGCTT TGGCAGCAGGAGTGAGGTACCCCGTAGTGCAAAATCAATAA
Protein sequence (LotjaGi3g1v0355900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRLLAFLFHQGVLDEQFLQLQQLQDESSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMGIHLNQFMGSSSSI GAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVVQNQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 142 | 142 | 4.3E-91 | – | |
| Gene3D | 1 | 146 | 146 | 4.5E-43 | ||
| Phobius | 1 | 14 | 14 | - | – | |
| PANTHER | 1 | 142 | 142 | 4.3E-91 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 9 | 6 | - | – | |
| SUPERFAMILY | 6 | 131 | 126 | 1.2E-24 | ||
| Phobius | 10 | 14 | 5 | - | – | |
| Phobius | 15 | 146 | 132 | - | – | |
| ProSiteProfiles | 29 | 125 | 97 | 10.137 | ||
| Pfam | 35 | 99 | 65 | 6.5E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi3g1v0355900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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