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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0360900 |
| Transcript ID | LotjaGi3g1v0360900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q9M9E1|AB40G_ARATH ABC transporter G family member 40; TrEMBL-Plants: tr|A0A0A1H9X9|A0A0A1H9X9_LOTJA ATP binding cassette transporter; Found in the gene: LotjaGi3g1v0360900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74362295..74365483) extracted from Lotus japonicus Gifu genome v1.2.
CATATTGGTATTGGATAGGGATTGGGGCATTGACTGGGTTCATGTTCCTTTACAACATTATATACACTCTGGCTCTCACT TTCCTTAATCGTGAGTAATTGAGTATTTCGTGTATGGTTATTTAAGATTCTAGTAGTGATTCAAAATTTTACAAATTAGT ATGTGTGATTTGTACAGCATTTGACAAGGCACAGACAACAATAAATGAAGAATCAGAAGACAAAACACCTAATGGCCGAG CCCCCAAAGATCTCATAGGTGATTTATCTTTTTCATCCAAGTCATGAAAACTCAGATGAAAGCATATTATTTTTATGTGT AAGCTTGTTGATTAGTGATTCATAATATGCCTTTAGACGCTGAACCAATTTTCATTTGTCTATAATAAACTTCAGGAAAT GCTGATAGTGCTGTGGATTCTAGCCATGGCAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACATTCGA CAATATCGTATACTCTGTTGACATGCCACAGGTAAGTCACTATAAGTTATAATTTAAGATTTGGGTTTGTGACTGTTTTT TCAGTTAACTTCACTCTAGTTAGGAACAATTTGAACCCTGACTCTTGAGATTTTAATTGGAAGGAAATGAGGGATCAAGG TGTAATGGAGGATAGGTTAGTCCTTTTGAAGGGCGTAAGTGGTGCATTCAGGCCTGGTGTTCTCACAGCATTGATGGGTG TAAGTGGAGCTGGTAAAACTACTTTGATGGATGTTTTAGCTGGTAGGAAAACTGGTGGGTCTATTGGTGGGAGCATAAAA GTTTCTGGCTACCCAAAAAACCAAGAAGCATTTGCTCGAATATCTGGTTATTGCGAGCAGAATGATATCCACTCTCCCCA TGTTACTGTCTATGAGTCCTTGCTCTACTCGGCATGGCTTCGTTTACCAGCAGAAGTTGATTCCAATACTAGAAAGGTTC GAACTTATAGCTCAAGACACTTTATGATTTTACTTTTTATTTAATGTAGAAAGACTCAAAGCAATTTCCATACCTTGAGC TATTTATTGATTGAGACAAATGGAAGCAGTCGTTCATTGAGGAAGTTATTGAACTAGTGGAGCTAAACCCATTGAGGAAC TCACTGGTTGGTTTGCCTGGTGTGAGTGGTCTCTCAACTGAACAGAGGAAAAGACTAACTATTGCAGTTGAATTAGTGGC AAATCCTTCCATAATTTTCATGGATGAGCCTACATCTGGGTTAGATGCTAGAGCTGCTGCTATTGTTATGAGAACTGTGA GGAACACAGTTGACACAGGAAGAACAGTTGTTTGCACCATCCATCAACCAAGTATTGACATATTTGAAGCTTTTGATGAG GTAAGAGATGATATGATAAATTGAAGATGTGTTTTATAGTTTTCCTAATTTTGGACTTGAATCTGATATATATTACATGT GGTTCTAGTTATTCCTAATGAAGCGTGGAGGACAAGAAATCTATGTTGGGCCACTGGGTCGTCATTCTAGCAAATTGATC GAGTATTTTGAGGTTGGTTGCAATTTATATTCAATTTTATTTCAAGAGGATAGCCATAATTCATGTGGGGTAACTTATTT TGTAATATTTTCCATTGTCCAGAGCATTGAAGGGGTTAATAAAATCAAAGATGGCTACAATCCAGCAACTTGGATGTTGG AAGTTACAAGTTCAGCACAAGAACTTACTTTAGGTGTTGATTTTCATCACACATACAAAAATTCTGAGTTGTTTAGGTAA GCTGGTTTATTTTGATATCGATTCACTATATAGTACCTAAGATCGTATTCGAGGAAGCCTTATATTGTTCTCAACTATTT TCCAGGAGAAACAAGCAACTTATAGCAGAACTCGGCAAACCTGCTCCTGGTTCAAAGGATCTTCATTTCCCCACTCAATA CTCACAGTCATTTTTGGTCCAATGCTTGGCTTGCTTATGGAAACAGCACTGGTCATATTGGCGCAACCCACCGTACACTG CTGTGAGGTTTTTCTTCACTACATTCATAGCCTTGATGTTTGGAACAATATTCTGGGGTCTCGGAGGCCAATAGTAAGTC AAACTTCAGTAATTTAATAATTAGACATTGGAGTTGGTCATGCTTTCTTTTCAACATGAATTCTGATTACTTTGTTTTTT TTACATCCAGCAAAAATAGACAAGATCTGTTTAATGCTTTGGGTTCCATGTACACTGCTGTTCTCTTCCTTGGCATCCAG AATTCTGCCTCAGTACAACCCGTGGTAGCTGTTGAAAGAACTGTCTTTTATAGAGAAAGAGCAGCTGGAATGTATTCTGC CTTGCCCTATGGACTTGCACAGGTAATAAAATCACTCTTTTGCAAAATGAATATGGCACTATGGTTTGCATAGTTTCTCA TGTCAAAAAAACTCCCTCAATTTTGTCACAGGTTATCATAGAGCTACCTTATGTTTTTGCCCAAGCTGTATCATACGTCG TCATAGTTTATTCCATGATGGGATTTGAATGGACTGTTGAGAAATTCTTTTGGTATTTGTTCTTCATGTTCTTCACATTG TGCTACTTCACATACTATGGCATGATGACTGTTGCTGTTACCCCAAATCACCATGTTGCTGCAATTGTGGCCTCTGCATT TTATGGAATTTGGAACCTCTTTGCGGGATTTGTCATCCCACGAACAGTAAGTGTTGTCAACCCTTAAATTCCCTTAGAGA ATGGATTCAATGGCTGTATTATGTTGATGCTTACTGATAATGTTCTGATTTTTTACAACAGAAAATTCCTGTGTGGTGGA GGTGGTACTACTGGGCATGTCCGGTGGCTTGGACTCTCTATGGGATGGTAGCGTCGCAGTTTGGGGATATAGACAACATG CTTGAATCAGATGATATTTCAGTCCAAGACTTCATCAGGAGTTTTTTTGGTATGAATCATGACTTCGTAGGAGTTTGTGC AGTTGCGGTTGTTGGGTTTGCAGTGGTCTTTGCATTTATCTTTGCAGTCTCAATCAAGGTCTTCAACTTCCAAAGACGTT AGATTAGACTCTTTCAGCCAACTTGAAAGATTTTTCACATCTTAAAAAATTTCCAACTTGTTTGTTTGTAATAATACTTG TATCTATCATATTAATGAATTTCTTGGCGCGCGAACAAAATTGCAAGTTATTTTTTTGGTTTGGGGGAA
CDS sequence (LotjaGi3g1v0360900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCTTTACAACATTATATACACTCTGGCTCTCACTTTCCTTAATCCATTTGACAAGGCACAGACAACAATAAATGA AGAATCAGAAGACAAAACACCTAATGGCCGAGCCCCCAAAGATCTCATAGGAAATGCTGATAGTGCTGTGGATTCTAGCC ATGGCAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACATTCGACAATATCGTATACTCTGTTGACATG CCACAGGAAATGAGGGATCAAGGTGTAATGGAGGATAGGTTAGTCCTTTTGAAGGGCGTAAGTGGTGCATTCAGGCCTGG TGTTCTCACAGCATTGATGGGTGTAAGTGGAGCTGGTAAAACTACTTTGATGGATGTTTTAGCTGGTAGGAAAACTGGTG GGTCTATTGGTGGGAGCATAAAAGTTTCTGGCTACCCAAAAAACCAAGAAGCATTTGCTCGAATATCTGGTTATTGCGAG CAGAATGATATCCACTCTCCCCATGTTACTGTCTATGAGTCCTTGCTCTACTCGGCATGGCTTCGTTTACCAGCAGAAGT TGATTCCAATACTAGAAAGTCGTTCATTGAGGAAGTTATTGAACTAGTGGAGCTAAACCCATTGAGGAACTCACTGGTTG GTTTGCCTGGTGTGAGTGGTCTCTCAACTGAACAGAGGAAAAGACTAACTATTGCAGTTGAATTAGTGGCAAATCCTTCC ATAATTTTCATGGATGAGCCTACATCTGGGTTAGATGCTAGAGCTGCTGCTATTGTTATGAGAACTGTGAGGAACACAGT TGACACAGGAAGAACAGTTGTTTGCACCATCCATCAACCAAGTATTGACATATTTGAAGCTTTTGATGAGTTATTCCTAA TGAAGCGTGGAGGACAAGAAATCTATGTTGGGCCACTGGGTCGTCATTCTAGCAAATTGATCGAGTATTTTGAGAGCATT GAAGGGGTTAATAAAATCAAAGATGGCTACAATCCAGCAACTTGGATGTTGGAAGTTACAAGTTCAGCACAAGAACTTAC TTTAGGTGTTGATTTTCATCACACATACAAAAATTCTGAGTTGTTTAGGAGAAACAAGCAACTTATAGCAGAACTCGGCA AACCTGCTCCTGGTTCAAAGGATCTTCATTTCCCCACTCAATACTCACAGTCATTTTTGGTCCAATGCTTGGCTTGCTTA TGGAAACAGCACTGGTCATATTGGCGCAACCCACCGTACACTGCTGTGAGGTTTTTCTTCACTACATTCATAGCCTTGAT GTTTGGAACAATATTCTGGGGTCTCGGAGGCCAATACAAAAATAGACAAGATCTGTTTAATGCTTTGGGTTCCATGTACA CTGCTGTTCTCTTCCTTGGCATCCAGAATTCTGCCTCAGTACAACCCGTGGTAGCTGTTGAAAGAACTGTCTTTTATAGA GAAAGAGCAGCTGGAATGTATTCTGCCTTGCCCTATGGACTTGCACAGGTTATCATAGAGCTACCTTATGTTTTTGCCCA AGCTGTATCATACGTCGTCATAGTTTATTCCATGATGGGATTTGAATGGACTGTTGAGAAATTCTTTTGGTATTTGTTCT TCATGTTCTTCACATTGTGCTACTTCACATACTATGGCATGATGACTGTTGCTGTTACCCCAAATCACCATGTTGCTGCA ATTGTGGCCTCTGCATTTTATGGAATTTGGAACCTCTTTGCGGGATTTGTCATCCCACGAACAAAAATTCCTGTGTGGTG GAGGTGGTACTACTGGGCATGTCCGGTGGCTTGGACTCTCTATGGGATGGTAGCGTCGCAGTTTGGGGATATAGACAACA TGCTTGAATCAGATGATATTTCAGTCCAAGACTTCATCAGGAGTTTTTTTGGTATGAATCATGACTTCGTAGGAGTTTGT GCAGTTGCGGTTGTTGGGTTTGCAGTGGTCTTTGCATTTATCTTTGCAGTCTCAATCAAGGTCTTCAACTTCCAAAGACG TTAG
Protein sequence (LotjaGi3g1v0360900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLYNIIYTLALTFLNPFDKAQTTINEESEDKTPNGRAPKDLIGNADSAVDSSHGRKRGMVLPFEPHSITFDNIVYSVDM PQEMRDQGVMEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGSIGGSIKVSGYPKNQEAFARISGYCE QNDIHSPHVTVYESLLYSAWLRLPAEVDSNTRKSFIEEVIELVELNPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPS IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSSKLIEYFESI EGVNKIKDGYNPATWMLEVTSSAQELTLGVDFHHTYKNSELFRRNKQLIAELGKPAPGSKDLHFPTQYSQSFLVQCLACL WKQHWSYWRNPPYTAVRFFFTTFIALMFGTIFWGLGGQYKNRQDLFNALGSMYTAVLFLGIQNSASVQPVVAVERTVFYR ERAAGMYSALPYGLAQVIIELPYVFAQAVSYVVIVYSMMGFEWTVEKFFWYLFFMFFTLCYFTYYGMMTVAVTPNHHVAA IVASAFYGIWNLFAGFVIPRTKIPVWWRWYYWACPVAWTLYGMVASQFGDIDNMLESDDISVQDFIRSFFGMNHDFVGVC AVAVVGFAVVFAFIFAVSIKVFNFQRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 414 | 414 | - | – | |
| PANTHER | 1 | 667 | 667 | 0.0 | – | |
| PANTHER | 1 | 667 | 667 | 0.0 | – | |
| MobiDBLite | 25 | 54 | 30 | - | – | |
| CDD | 66 | 304 | 239 | 8.11719E-107 | ||
| ProSiteProfiles | 69 | 321 | 253 | 14.486 | ||
| Gene3D | 82 | 313 | 232 | 3.7E-47 | – | |
| SUPERFAMILY | 88 | 305 | 218 | 1.06E-37 | ||
| Pfam | 97 | 249 | 153 | 4.1E-20 | ||
| SMART | 106 | 298 | 193 | 1.1E-10 | ||
| Pfam | 395 | 608 | 214 | 1.1E-56 | ||
| TMHMM | 414 | 436 | 23 | - | – | |
| Phobius | 415 | 433 | 19 | - | – | |
| Phobius | 434 | 444 | 11 | - | – | |
| Phobius | 445 | 461 | 17 | - | – | |
| TMHMM | 445 | 462 | 18 | - | – | |
| Phobius | 462 | 493 | 32 | - | – | |
| TMHMM | 493 | 515 | 23 | - | – | |
| Phobius | 494 | 516 | 23 | - | – | |
| Phobius | 517 | 527 | 11 | - | – | |
| TMHMM | 528 | 547 | 20 | - | – | |
| Phobius | 528 | 546 | 19 | - | – | |
| Phobius | 547 | 557 | 11 | - | – | |
| TMHMM | 557 | 579 | 23 | - | – | |
| Phobius | 558 | 577 | 20 | - | – | |
| Phobius | 578 | 588 | 11 | - | – | |
| TMHMM | 586 | 608 | 23 | - | – | |
| Phobius | 589 | 608 | 20 | - | – | |
| Phobius | 609 | 635 | 27 | - | – | |
| Phobius | 636 | 662 | 27 | - | – | |
| TMHMM | 637 | 659 | 23 | - | – | |
| Phobius | 663 | 667 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0360900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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