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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0378400 |
| Transcript ID | LotjaGi3g1v0378400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase DeaD; TAIR: AT3G16840.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13; TrEMBL-Plants: tr|I1KIF1|I1KIF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0378400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77096644..77107217) extracted from Lotus japonicus Gifu genome v1.2.
CAACCTGAAAGTGCAACTTCATTCTCCTCTGTTCACTCTGCACAAGTTTTCTCCTCCTTCTTCGTCCGCCATGGAAGAAG CAGTAGCGGCAGCGACACCCTCTTCTCAGAGAAAGGCCAAGAGGAAGTCTCGAACCCTAGCTTCCGGCGACCCTGAGCTC GAGCGTCTCAACTCACTCTCATGGAACCCCACTTTCCCTCAACAAGATGATGACAACGATCCCTTTTCCCTCTTCATTGG CTCCAATGAACTCGAAGGAGGTAGGTTCCTTCCTCTCACCCCTTCTCTCTTCACTTCCCAACCTGCATCATCTAGCAAAT CTGCATTCTCTGCGTTCTGGAACGTATAATCATGTAAATGTAGATTTTGTGTGTCATGCGTGAATGTTTAAAGAAATTAG GGTTTGTATGAGATAAACTTGAGAATTAAGCAGTTATATAGTTGTTATTATCTGAAGATTCTGTTTTCTTTGGATTGGTA TCCTTATATGGGGTTTTGAATTTTACATTGAGCTGCTTTATTTTTGGGTAGGTTTTCTTTCACTTGAGGAGATTGATGAG GCTGATTATGGAATGGATATTCATAAACCTGGAGGAGATGACAACAAGAAGCAGGTGGTGCCTAAGCAGGGCAAAAAGTT GAAGAAACAGAAGCATGATGGGGTTGATGGTGCTCGTAGTAGCGACGATGTGCCGGAAGTGGAAACCGATGGAGAAATCG TGAAGGATGAGGAAGTGAAGACTGAGGTGAAGAAAAAGAAGAAGAAGAAGAATAAAAACAAGGCTGCGAAAGAAAACCAG AAACTCGAGCCGCAGCCGGATACTGGTGAGGGGTGATTACTTGTTTAATTTTAAATGAACAAATTCATGTTAAAAGAGTG GTTTCTGGTTTTTTGATTGTTTTTATAAAGTTGGTAATTGAAGATGAGGAAGACAGAGTCCACTAATGTCCATATCTTCT TATAGGTTTAGATGCTGATGTGAAGGGTGATGTTGGGGAAGAGAGCATTGATGAGACTGAATTTTATGGATGGAATGAGT TGAGGCTTCATCCTCTTCTAATGAAAGCAATATACAAGCTTGGCTTCAAGGAACCAACACCAATACAGAAAGCTTGTATT CCAGCAGCTGCTCATCAAGGGAAGGTTTGTTTGAAGTCCTTCTTCAGGGAACTTTGATGTTTTGAACAGTAAGACTTGCT TTATTGAGAATTCTTATGTGTTCATTTGACAGGATGTTATTGGGGCTGCAGAGACAGGGTCTGGTAAAACACTTGCGTTT GGTTTGCCAATTTTGCAACGCATTTTGGAGGAGAGAGAGAAGGCCGGAAAGATCGAAGAAGAAAAGGGTGAAAAAGCTGA AAAGTATGCTCCTACCGGTCTTTTGAGGAGTCTTATTATTGCGCCTACTAGAGAACTTGCACTTCAGGTACTCGTCAATG CTTTCTTCTTATTTGCATAATTGTCAGTTGCTTGATTGTTAAAATCATGTTCACAAAAGGTGGGAAGTGTGAACTTTTAT GATACGTGTTTATTTTAAGTAGTCACAGGTCCTATATGGTTTAATTTGGGCACTATTCTTGTCCATCAGAGGGGGTAACT TGGATGGGATTGTCTAAGCCGGTAATGAATCTCCTAGGTTTTTGTTACCAGACTTGAGCCTCCTGTATGTGTACTCTAAT ACTCTATGGAATCTGGTTTCAGTCAAAGAATAATGTGTTGGACATTAAGCAAAAACATGAAGTAATGGTGGAAGATTTTC CAAGTCAAATTAAAATTTGGGCCATTTGAAAAATCTGTTATGTAAAAATGGTATTTGGGTACAAACTGAGACATTAACGT CTGTTTGAAAACTGACATAAGTGCTCACAGTGAAAATTTTCAGCACTGAAAATAATTTACTGGTGTCAATAGCACGCTAT TCTAATTGATATCACAGATTGTAATTGACTAATATAAGACTCTAACCATATCTAACTAACTCATGACAAACACCTAGGTT ATGATAGAATATGATAGACCTGCAGAATTTGTTGAGGGTCAGTTGCTTGACCGTGGCACAAAGAGGCCCACTGTCTGGAA GTTATATTCTAGGAAGAAAAAGAAACCTGCTAGCACGTTAGTTAGTTAGAAAAGGAGAGTATTCTGTTAGCAGGGGAGCA TACAGGGGGGAGTGAGGAGAGAGAGGAGGGTGTGAACATTCATAGTAATAGTAGAGGTTTTTCTCTAGAAGAGGAACATC TGTAGTAGGAGCTGAGGCTCTGGGGAGGTGCAATCAGTATCTTACTGAGTGTTACTCATTCTACTAATAGAATAATTTCT GTTTTTCTTTTTGAGCTCTATCAGAATAGAGCCAGGTATGCTATACCTGCATAAACCAATATTGCATGTGGTATTCTGAA TTCTGTTCACCGGCACTGCTGCACTCATGCCATGTTAAATTCAGCTGTCATGGAATCCAACTATCTGATTAGACCTTTTG TTAAAATTAGAAATTTGTTGTACTGACCTGTAAACCTTTGGAGTCTCATTAGTTGAAATATAATTTGAAAATTTTGTAGT TGATGTTGTGTTTTCTGGGATCCAACAGAAATCACTGATGATAGAAGTGCTCAATTTTATTATTTGGTTCTGTAATTGCT TTTCCAGGTCACTGATCATCTGAAAGCAGTAGCCAAGTATATTAATGTTAGGGTGACCCCTATAGTTGGAGGGATTTTAG CAGAAAAACAGGAGAGACTTTTAAGATCAAAACCTGAGATTGTGGTCGGGACTCCAGGGAGGTTATGGGAACTTATGTCA TCCGGAGAAAAGCATCTAGTCGAGGTATTTCTAACTCTTTGCATTATGAAGTTTGAGTGTAGCAAAATATATAAATTTTA GGATTAAATATTTGTTCTAATGAATTATAATCCATTAGATAATTACCAAGGGTTAAACTGATGTATAGTAATATTGACCT TCTTGTTTACAGCTACATTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAATGGTCATTTCAAGGA GCTGCAATCTATAATTGACATGCTTCCCATGTCCAATATATCCACTGAAGATAATTCTCAAAATGCAGAAAATTGTGTTA CAGTTTCTAGCTACCAAAAAAAGAAAAGGCAAACTCTTGTTTTTTCAGCAACTGTTGCCCTGTCTGCTGACTTTCGCAAG AAGCTAAAGCATGGTACACAAAAAAAGCAGAAGCAATCATTGACAGATGGATTGAATTCTATTGAAACTCTTTCTGAGCG AGCTGGAATGAGACCCAATGCTGCAATTATCGATCTTACCAATCCATCAATATTAGCAGCTAAGCTTGAGGAATCATTTA TTGAGTATGTAAAATCATATCTCAACTGTAAAACTCAAGTTTCATTAAATACTTATATTTTTTTACCGAAATTATTGTTT GAATTTGGTGCTCTATTATTTTTTTACCCTTACTATTGTTGAACAGTCTTGCTAAATTTACAAGACGCTCCTTTGTTGCT CTTTTTATAATTTTGTCAATCTAAACTCATTATCCACGATAAAATCATTATGTAATATGATATGAATTTTTTGTTTGATG TGGCAAGAATAATGATTTGTTATTATTGTTATGAAATGCAGATGCACGGAAGAAAATAAAGATGCCTATGTGTATTATAT TCTGACTGTCCATGGAAAAGGCCGTACAATAGTTTTCTGTACGTCAATCGCAGCTCTGCGTCATATTTCTTCCGTATTGC GCATTCTTGGTATCAATGTGTGGACTCTTCATGCCCAAATGCAGCAACGAGCACGTTTAAAGGTTTGTGTACTTAGCTCC AATCCTTGGCTTGCTTCGTTGCAACTTTCGTTTTCTTGGCTGTGCTACTGCTAAAAGGTCTATAGTATAATATAGTTCAC CTGTGAGTCATCATGTATCACTTTCTGTTAGGATTTGAGAAAAACCCTAACAGCAACCACAAGGTGAACGAGAAAGGAGT ATTTTTTGCTATTTTTGTATATATAAACTGGGAATCAAACAAGAAGAGAAAAGAGAGGAAGAGAGAGGGGTTCGAAAAAC AATTCTAATGGATTCACATGAAGGAGAACCTTCTTTCAAGGGAGAATCCCTTCCAAGGGTGAAGCCCTTTTACAAATCTA AAACTCAAATCATAATCTTAATCTAATGAAGACTCCCCTATTTATAACTATTCTAACTTCACTATGCTATTTCCTAATAA CAGAAATAATAGATATAATATCTATTTAATAACAGAAAATATATCCTAATAATTGGTACTCCTAATAACATAAAATATAT TCTAATGGATGGATATAATATCTATTTCAATAACATATCCTATTAAACTTCAATATTTCGATCCCTAGCCCTTTCCTTCT TCAGTAGTATACAAAAATTTTGTTGGTTACTAGTTGAATGTTGCATCTGCAATAACTTATTAAGTTATGCTTTTGAATTC ATATTCAGCATATACCATGCCATCGCGAGAACAAAATGAATTCTTAGAAAGTTATGCTTTGGATTTCCATGTCAATTCAC CTTAAAGTTATCTGTGGTAATTAAGGCAATAAGTTAAGAACACAAACTAGAAGAATCCAGGGTCCAAACTCTTCTTTCAG GATTTCTTATGCTTAACTAATTCTCCGCTACTGTATCTTGCCTAATATTTTCTCCTTATTGAAAGGTGTATCATGATAAA TGCTAATATGAAATGAGTTACTGAATTTACTGTATATACTATATTGTCACACATGAGCATCATATCGGCCAACTTTGTCT CTCCTTCCTAGTTCTGTTCAAAAGATCCAGTTTTATAGAACCAATCGGTAACCTTGTTCAAACCAAAATTAAAATAACCA GTTTTTGTAACCGGTTATACGTAGGAATAGGATCCAATTTATATTGTAAATCCTATTTCGGGTATCCATCTTTTAAAGCC GGTTCTCAAATTTGAGTACCCATATCAAAATATCTTCTCCTTTGTGAACTAAACCCAACCCCCCTCTCTGTCTCTCTGTT TATCTCTCCCCCTGTGTTTCACTTTCTCCCTGCATCTCTCTCTTTTTTATCCAAAATCTGCACGTTTATCTTTTTTTTAT CCAACATTCTGGAAAACTAAATTATGCACACCCCTACTTCTTCCATAGGGCATTGGGTCAGATTCTTGAAATTTTGATTA AAATTATCTTATTACTTAGTAACATTCTTATCATATTTAAAATTGCATTCTATTTCTCTCACATTTTTGTTGTTGTTCCC GACTTGTTTAATGCAGGCCATGGACCGTTTCCGGGAAAAGGAAAATGGCATACTTGTTGCTACCGATGTTGCTGCAAGGG GTCTTGATATTCCTGGTGTTAAAACGGTTGTCCACTATCAGCTTCCACATTCAGCAGAGGTAAGCCAGTACCTTGCTTCT TTCATCCATATATTCATATATATTACATCTGAATCTTGTTTCTTTTTTTAGGTTTATGTACATAGAAGTGGTAGAACAGC AAGAGCTTCTGCTGAAGGTTGTAGCATTGCTTTAATCTCACCGAGAGATACAGCAAAATTTGCTTCATTGTGCAAGTCAT TTTCAAAGGTTTATTTTGAACACCTCTTCTATGTTTTAAGAAAATTTAATAAACAACATAATATCTTTTACTTGGAATGA GTCAGCAATACTTGCTGTTTCATCTAGACCAGAATATTCAATTTACATTTCTGATTGCTTCGTTTGTATATACAGGATGC CTTTCGAAGGTTTCCTTCAGAGAACTCATACATGCCAGAGGTTCTGAAACGATTGTCTCTTGCACGTCAAATAGACAAGA TAACGAGGAAGGGTTCCCAGGTAATAGAATCACCTAAATTCATACTGATAAGCTTTTAGACTTTATTCATGCAACTTGTG TTAGGTACTTAGCTGAATCAAGTTAAGGTTTTGTCATTTTCATGTATATTTGGAATGGTTTCTTGTTGTTTGACTTCGCT TTTCATGTTAGAGTGTTAAATTTCTGTTTTGCTTTATTACTTCCTTTTCAACAGTCTCTATTCATTGTTAAGCTCCTTGA GATTTTAAAGATATATCAATGATTGTTCATTTGTTACATTATCTTGTGTATATATTTCCTTGTTAGGCTTCAACTATTTC TAACCAGATGTGTACTTCTATGTGTGAATTCTATTTTTCTTATTTTAGGAGAAGGCTGAAAAAAACTGGTTTGACCGGAA TGCCAACTCAGTGGAATTAGTTACAGAAAATTATGACAGTGAGGAGGAACAAGTTAACAAATATAAGGAAACCAAAGCTA GCTCTAGACATTTGAAGAAATTGCAGGAGGTTTGATACTCCTTGTTTTAAAACTTGAAATGACAGCCTCTATTTTTTTTC ATTGTTCCAACTTATTTAATTCTCAAATTTTACAAATTGCAGGAGCTCAATATGCTGATTTCACGTCCTTTACAATCAAA AACATTTTCACATCGATATTTAGCAGGGGTATTATTCTTACTTTGATTTGCTTTCGCTCTGACACTTACTGTTTACTGCA TTTGTCATATCTTTTGACCAAGCATAGTCATTGTTAGTTGTTGCAACTTACAATAGTATAATTTTACTTTTTAATGTTGT TCTTTTTAAGTAGCACAGCCCTATGGATAAACTGAATAGTTAATTATATTACTCAACTCAAACCACACACAGTTCAGCAA TATACTTAATGTCCCACAAACAAAGTCTCCTGCAGAGTATTTACTGTCCACGCAGTATAGAATACATAATCAAACACCCG ACTATCACATATACTCCTAATAAATAATTCCCAGTAGTTATTTTGTAATCATAACTACCTTAAAGCAGGTCTTCCACAAA TTCATTCCTAATTGTAGGCCGTTACTTCTGCTGTTTGGCTTGGCTGGTTTGTAGGCTAATGGATCAGCCTCTCAGATCCA TCAGATCTATGGTTAGGTTGTCTGTTGGGATGATGTTCCCTTTTTGGACTGGAAATGGACCTGCCACACCTGAATGTGTC ACGTATGGCTAGTCTTCAGTTAATGGATCATTAATTATTTTCCTAACCCATATTTTAGCTCTATATAGAACCTTGATTAG CTCAATATTTCTACACCATTGCATTTTTATGCTGGACAATGCCTCAGTCTCAGTCTTAAAATTTCAGTACCCTTACTATC AGAACGAATATAATTTTCAATGAAACTATTGAATATTGATATTATTTTTCATACTTCATTTAGTATCATACATGTAAATT TACTACCTTTTAGGACCATTATAGTTACGGCCGCCATTCACAGGTTGATACTATACCCCTTATAACAATGACTTGTATGG TTATTTGAACATTTTAAAGAAAAAACTCAATTTGTGAGAGAGGTAGTTTCAGTACTACAAGAGAATTGAAAATTTGTTCC CATGAGCCATGCTTACTGATAATAATGTCTAGATGATAATACCACGCTTTAATGTTTTAAAACTGTATAGATGAATATTG TCAGGAACATGCTTTTTCATTGTTTCTTTTCCTTTCAACTTTTACCTGGAAGGTTTTAGACAAAACTGAAATGTAGTGCT CTCTCTGCAGGCTGGTATCACACCTCTCATGCAGGGACATTTGCAACAATTAGCAAGGCAAAAACTAAGTGATCACCAGG GTTCAGGACCAGGCAAAAAGGGGAAATTGGTTGTGATTGGTCAAGATTGTGTGGAAGCACTTCAGGCACTTCGAAGTGGT GGTGAAGAGGTAGAATGTTTCACCGTTTTTTTTTTCATATTTTGGAAATTTGTTATTGCTTTTTGAATAAAATTAAGGAT GAGGAAGATCAGAGATTTGCCTGCTTGATGAATGAATTAAGGATTGTTTTTCTTTTTGTATATTTTTGGAAACTCAAATA TGCAACATCAAAGGAGCATTGGCAAAAATTGTATTTTGCTTCTGTTTCTTTTCCCCCATCCCTTTGTTCATGCGGCCTAT CATTTGATATCCTTGGATGGAAAATGCTCTTGGCTGATGTTTATTGGCAAGAATAACTAGGAGACATGATAACTATATTA CATATACTATTTGATTAAATTTTGATCATCTGTTGATGTAATTTTTCTCCCCAATATCATCAAATCAAGAAAAAATAGCT TAACAATCATCGTGAGAGATCAAACTTTTTTAGTCATGTCGGAGTTTATTATTAGAGGGGACTCATGACACAATAGTCGG AGTTGCTGCCATGTGATGAATCATGAAATCAGTCTTGTGCAAATGCAAAGTAAGGCTGCCCACAATATAGCCTACCTTTC CGGAGATTCCACCATCACAGGAGCTTTATAGCACAAGGCTTCCCTTTTTTTGGTAGCATACTACTTGATGATTGCATATA CCAACTTTATGTTGATAGTTGATCAAAGTTAAACTCGATATTTGAAAAAGTAGAATCTAACCTATTGTGGCAGAAGTGCT AACTTCTGTTTAGTAAAAGGGTAATAATCAGCTAACTTCGATTGAACTTATGTTTTTTGTTCTTTCTTTTGCTCCTTTTT CTTCACAGGTGCGCATGGATGCCAAAGATTTGGCAGGAAAACAGAGAAATATGCAGAATTTAAAAAGAAAAAGAAAAGAC GAGAAGAGACGTAATGTTTTAGCCTTAATATATCTGTCTTCCTTATTGTTTATCTAGTTATTTTGCTGAGTAATATTTGT GCTTCTAGCTGGTAAAATCCTGGTATGTGTTGTTCCAGGTTTGCGTGATGAGCGTAGAAAGCAGAAGAGAGACCAAAAGC AGGAGGACGAATAATTTTACATACAACTGAGACAGGTAAAATTTAACACAAAAAAATGTTACAAGTGGCTGATTTTTCAG GACAGCACTGTTGTTTCTCACTTTGATATGTATGACAATATAGTCCGATGTTAAATAGTAGGGGTATGATTGGTTAAGTT TATATTATTGGAACCCCACTGTCATCCTTGATAGTTCTCACGTAATATTCATGCTTGAAGAATGCAGTGTTTCTAGAGAA ACATTGACCCGCTGTGACATTTTGCTGCATCGAGAATTGTATTTGCATTCCAGTTAGAAGTGGCTAAAAGAACCTTAAAT GGAAATCCATGTCTCACAATGGCTAAAAGAACCTTTATATTGAGAGGGATGAGTCTTTTTTTTAGGTGAATCCGGCACAT TTTTTTGGTGAATGAGTCTTCAATGCTACCTGAGTAGTGAAATTTTGCTCTATATTATTCTTTTAATTGTAAATGTTGAA ATTACTTTGACTAGTAAGTGCTGATTTTTTTTGGGTACATCTGGAAGACAAAATGCACTCTCCAGGGATTATCCCTGAAC CTCCCACACCTAACCCATGTGTCTTAGCTCTTATCATTTGAGCTATCATTTGAGGACAAATGCTGATTAAATACGAGCGT CGTGCTTTTCAAATGTTTTTTTCTAAATCCTTAATATTATGAGTGACTAGTGTGTTTCATTCACTATAAATTATGAAAAA AACTTTTTAAATTATAAAGTGAATTATGTATATGAAAATATTCCATTATTTATGTCTATTAATTTGATAGGTAATCAAAT ATAGCTTTATGATTTTGAATTAATAGTTATGGAAGAAAGCAATTCAAAAATTTATGATTGATTTAATTTAATTAAAAATA TTTTAGAAAATGTAAAATATTTGAAATTATGTTAGTCAGATGTCTAATAAACAAAGTGCTAAGTTGTGCTAAGTTATGCA GCTAAAAAAATGTGAATAAATCATATATCCCTACATTCAGGGTTTAATTTATAGAAATTTGATTTTATATCCAAAAAGAC GAAAAAAAAGTCTTATTTAATTTTGCTTTAGCTCTAAATGTACATTGAACTGGCTTGTTTTCAATCAAATGATCAATGAT GTTATATTTAACTTGTTAGCTCACATTCAAACTGAGATGCATGAAAATGTGATCTGATCAATTGGAGTTGGATATAGTGG ATGACTTTCAGGTGTTATTTCTAATAAGCCGAAATTGAGTAGCATAATGGACCTACTTATTTCATTTGGTAATCAATTGT ATTTTTCATCAATAATGATTATAGAAAAGAAAAGAGATACCACCAAAGTGAAAAAACAATGGAAACATATACATAAAAAA GGATAACACTTCACGTTGCTTAAACACACAAACGTTCATTTCTAGGAACACCACAGAAGAAGATGACCTTAAGCGTGTAG TGCATGTTGTAGGAACACAACAGTCACCCACCCTACTTTGCTAATCTCTATCGTTGACAACGTTATCATCACCGAAGCAT TTAATCTACATCCACCATGTAAAGATCAGAGATGCTTGAAGTTCTATTTCTTGAAGAACACATTTCTTTTTGTTGTGAGT CTTATCCTTGTTGCTTTTAATTTGTACGGAAGATGATGTTCGAGATGAAGATGTTACTCCCTTCATTCCAAACGGTTGTT ATTTTAGTTTTTCGCATAATTTCCAAAATGATTGTTGTTTTAGAAATTCATGACTATCTATTACATTTTTTTATTTATAT CTTCATTATATCTC
CDS sequence (LotjaGi3g1v0378400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGCAGTAGCGGCAGCGACACCCTCTTCTCAGAGAAAGGCCAAGAGGAAGTCTCGAACCCTAGCTTCCGGCGA CCCTGAGCTCGAGCGTCTCAACTCACTCTCATGGAACCCCACTTTCCCTCAACAAGATGATGACAACGATCCCTTTTCCC TCTTCATTGGCTCCAATGAACTCGAAGGAGGTTTTCTTTCACTTGAGGAGATTGATGAGGCTGATTATGGAATGGATATT CATAAACCTGGAGGAGATGACAACAAGAAGCAGGTGGTGCCTAAGCAGGGCAAAAAGTTGAAGAAACAGAAGCATGATGG GGTTGATGGTGCTCGTAGTAGCGACGATGTGCCGGAAGTGGAAACCGATGGAGAAATCGTGAAGGATGAGGAAGTGAAGA CTGAGGTGAAGAAAAAGAAGAAGAAGAAGAATAAAAACAAGGCTGCGAAAGAAAACCAGAAACTCGAGCCGCAGCCGGAT ACTGGTTTAGATGCTGATGTGAAGGGTGATGTTGGGGAAGAGAGCATTGATGAGACTGAATTTTATGGATGGAATGAGTT GAGGCTTCATCCTCTTCTAATGAAAGCAATATACAAGCTTGGCTTCAAGGAACCAACACCAATACAGAAAGCTTGTATTC CAGCAGCTGCTCATCAAGGGAAGGATGTTATTGGGGCTGCAGAGACAGGGTCTGGTAAAACACTTGCGTTTGGTTTGCCA ATTTTGCAACGCATTTTGGAGGAGAGAGAGAAGGCCGGAAAGATCGAAGAAGAAAAGGGTGAAAAAGCTGAAAAGTATGC TCCTACCGGTCTTTTGAGGAGTCTTATTATTGCGCCTACTAGAGAACTTGCACTTCAGGTCACTGATCATCTGAAAGCAG TAGCCAAGTATATTAATGTTAGGGTGACCCCTATAGTTGGAGGGATTTTAGCAGAAAAACAGGAGAGACTTTTAAGATCA AAACCTGAGATTGTGGTCGGGACTCCAGGGAGGTTATGGGAACTTATGTCATCCGGAGAAAAGCATCTAGTCGAGCTACA TTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAATGGTCATTTCAAGGAGCTGCAATCTATAATTG ACATGCTTCCCATGTCCAATATATCCACTGAAGATAATTCTCAAAATGCAGAAAATTGTGTTACAGTTTCTAGCTACCAA AAAAAGAAAAGGCAAACTCTTGTTTTTTCAGCAACTGTTGCCCTGTCTGCTGACTTTCGCAAGAAGCTAAAGCATGGTAC ACAAAAAAAGCAGAAGCAATCATTGACAGATGGATTGAATTCTATTGAAACTCTTTCTGAGCGAGCTGGAATGAGACCCA ATGCTGCAATTATCGATCTTACCAATCCATCAATATTAGCAGCTAAGCTTGAGGAATCATTTATTGAATGCACGGAAGAA AATAAAGATGCCTATGTGTATTATATTCTGACTGTCCATGGAAAAGGCCGTACAATAGTTTTCTGTACGTCAATCGCAGC TCTGCGTCATATTTCTTCCGTATTGCGCATTCTTGGTATCAATGTGTGGACTCTTCATGCCCAAATGCAGCAACGAGCAC GTTTAAAGGCCATGGACCGTTTCCGGGAAAAGGAAAATGGCATACTTGTTGCTACCGATGTTGCTGCAAGGGGTCTTGAT ATTCCTGGTGTTAAAACGGTTGTCCACTATCAGCTTCCACATTCAGCAGAGGTTTATGTACATAGAAGTGGTAGAACAGC AAGAGCTTCTGCTGAAGGTTGTAGCATTGCTTTAATCTCACCGAGAGATACAGCAAAATTTGCTTCATTGTGCAAGTCAT TTTCAAAGGATGCCTTTCGAAGGTTTCCTTCAGAGAACTCATACATGCCAGAGGTTCTGAAACGATTGTCTCTTGCACGT CAAATAGACAAGATAACGAGGAAGGGTTCCCAGGAGAAGGCTGAAAAAAACTGGTTTGACCGGAATGCCAACTCAGTGGA ATTAGTTACAGAAAATTATGACAGTGAGGAGGAACAAGTTAACAAATATAAGGAAACCAAAGCTAGCTCTAGACATTTGA AGAAATTGCAGGAGGAGCTCAATATGCTGATTTCACGTCCTTTACAATCAAAAACATTTTCACATCGATATTTAGCAGGG GCTGGTATCACACCTCTCATGCAGGGACATTTGCAACAATTAGCAAGGCAAAAACTAAGTGATCACCAGGGTTCAGGACC AGGCAAAAAGGGGAAATTGGTTGTGATTGGTCAAGATTGTGTGGAAGCACTTCAGGCACTTCGAAGTGGTGGTGAAGAGG TGCGCATGGATGCCAAAGATTTGGCAGGAAAACAGAGAAATATGCAGAATTTAAAAAGAAAAAGAAAAGACGAGAAGAGA CGTTTGCGTGATGAGCGTAGAAAGCAGAAGAGAGACCAAAAGCAGGAGGACGAATAA
Protein sequence (LotjaGi3g1v0378400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEAVAAATPSSQRKAKRKSRTLASGDPELERLNSLSWNPTFPQQDDDNDPFSLFIGSNELEGGFLSLEEIDEADYGMDI HKPGGDDNKKQVVPKQGKKLKKQKHDGVDGARSSDDVPEVETDGEIVKDEEVKTEVKKKKKKKNKNKAAKENQKLEPQPD TGLDADVKGDVGEESIDETEFYGWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP ILQRILEEREKAGKIEEEKGEKAEKYAPTGLLRSLIIAPTRELALQVTDHLKAVAKYINVRVTPIVGGILAEKQERLLRS KPEIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNISTEDNSQNAENCVTVSSYQ KKKRQTLVFSATVALSADFRKKLKHGTQKKQKQSLTDGLNSIETLSERAGMRPNAAIIDLTNPSILAAKLEESFIECTEE NKDAYVYYILTVHGKGRTIVFCTSIAALRHISSVLRILGINVWTLHAQMQQRARLKAMDRFREKENGILVATDVAARGLD IPGVKTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTAKFASLCKSFSKDAFRRFPSENSYMPEVLKRLSLAR QIDKITRKGSQEKAEKNWFDRNANSVELVTENYDSEEEQVNKYKETKASSRHLKKLQEELNMLISRPLQSKTFSHRYLAG AGITPLMQGHLQQLARQKLSDHQGSGPGKKGKLVVIGQDCVEALQALRSGGEEVRMDAKDLAGKQRNMQNLKRKRKDEKR RLRDERRKQKRDQKQEDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 56 | 56 | - | – | |
| MobiDBLite | 32 | 52 | 21 | - | – | |
| MobiDBLite | 76 | 167 | 92 | - | – | |
| MobiDBLite | 76 | 94 | 19 | - | – | |
| MobiDBLite | 102 | 137 | 36 | - | – | |
| Gene3D | 129 | 431 | 303 | 6.4E-74 | – | |
| Coils | 132 | 153 | 22 | - | – | |
| PANTHER | 137 | 639 | 503 | 1.3E-104 | – | |
| PANTHER | 137 | 639 | 503 | 1.3E-104 | – | |
| ProSiteProfiles | 182 | 210 | 29 | 11.744 | ||
| CDD | 193 | 459 | 267 | 1.0888E-113 | – | |
| SMART | 201 | 434 | 234 | 6.6E-46 | ||
| Pfam | 206 | 414 | 209 | 2.2E-43 | ||
| ProSiteProfiles | 214 | 431 | 218 | 24.926 | ||
| SUPERFAMILY | 273 | 605 | 333 | 1.51E-59 | ||
| ProSitePatterns | 353 | 361 | 9 | - | ||
| Gene3D | 467 | 709 | 243 | 1.0E-45 | – | |
| ProSiteProfiles | 469 | 637 | 169 | 20.582 | ||
| CDD | 470 | 599 | 130 | 2.61504E-50 | – | |
| Pfam | 482 | 589 | 108 | 2.4E-28 | ||
| SMART | 509 | 590 | 82 | 1.1E-29 | ||
| Coils | 666 | 686 | 21 | - | – | |
| MobiDBLite | 773 | 818 | 46 | - | – | |
| Coils | 781 | 812 | 32 | - | – | |
| MobiDBLite | 802 | 818 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0378400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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