Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0383900 |
Transcript ID | LotjaGi3g1v0383900.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT2G45910.1 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|I1KI97|I1KI97_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0383900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77823348..77828123) extracted from Lotus japonicus Gifu genome v1.2.
GTGTTTTCACTGAGCACCACTTACATGATATTGCAGGAGAATGACAGACCTCAGATCTAAGAAAGCTATCTATGTAAAGG AACAAGCTCCAGCTTCTTGTCGTATACAATTCATTTGCAAAGGATACCTTATCTACACAAGGTAGGTTATTTTTTGGTTA CTGATCTTTTCTCATATGACTAGGGATGCTTACTTAGTTATCATATTCTTAGTTTAGTTAGAGCTTAGTTTGAGTTGGTT ATACAAAATTGAAGTTGGTTATATGCTATTAGTGTGTGTGCTTGCAGTAGAAATTGGTATTGTATCATTCCATTGTGTAT CTTTGAATATTGTGCAACCTCCTTGGTTTACTTTTTCTCTTGAGAATTAATCTCTCATCCTTCCTCTTCTTGATTTATCT CAATTTACTAATTCGGTATCAGCTTAATGAAGTCAATCTAGCCCCGTGGATATCTCATGATGGGCTAGGAGCATTTCTCT AAATATCAAGTCTGCAATCTCCACGCTTCATATATTCAACTCTGGGCATTATGGGTGTGTTAAGTTCTCACATATACTAG AGCTATGATCAAAGAAGTCATTATAAAGGGTAGGGTTAATTCTCATCTCTAAGTAAATTAGCTTTTGGGGTAGAATTGGG TCAAGTAGATAGAGTAACATGAAGATATATGTAGTTCTGGAGGAAGCTTGATTGTGTCCTTAGGGCACTAAGCTCAATAA TAATTTCATAAAGCTATATTTTTTTGAGTTTTCTTTGAATTTGTATGATTTTCTGCACTCTGCCACAGTATTATCATTGC ACTTGGTTATATTATCTTGGGTACTGAACTGAGTACCACATCAAATCAGGGATCGCAGTTTGAGTGGAGGAAATGTAGGG GTCACATCTCCTTTGGTGCAGCAAATGCCAAACACTGAAGTTGGGCTTTTAACTCACTTTAGATCTCATTCTGTTTCCTT TGGGAAAAGTGTGAAAGATCAAGTGTTATTTCGCAGAGCAAGCTCCACCAATGATGGACATGGAAAGAGCATTGCATCTG TTTTCTCACCGTGCTCTCAGAGTGGTTCAGTAATGAGCCCAAATTTGATTAATGATGGAAGTGAAAATGTATTGGAATTG AGTTTGAGGGGACTTTCTAGTATTAAAGAGGATCTCCATCATTCATCGCCTCCTAGTGTGCTGGTACTTACATACTTCCT AATGTTCGAGTCATTTGGCGATAGAAAATCTTGATCCGTTTTTTATTGAGTTTTTGCAATTGAATTTATGATATGTAACA CTTAATTTGATTTATTGAACATTGTGAACACTAGCAGGATGGTGGAATGAATGATACTCTTTATGATCAACTAGAGCAGG CAATGTCTGAGGCTGAGAATGCTAGGTGTGATGTGTATCAAGAAGCTCTTAGGCGTGGGAAAGCTGAAAAATTTGCCATT GATGCTATACGCAGGGTAATTGTTCTTCTCAGCTTTTAATGTAAAGGTTCTTGACCTTGCATCTTCTAATATATTTTAAT GTGGTTTCATGCAAATATTTGAACCATTCAATTTACAGACTAAAGCCACTGAAATCATGTATAAAGAAGAGCTGAAACAA AGGAAAGAGGCAGAGGAAGAACTAGACAATGCAAAAGCAGAAATTGATAACATGATTAGCCAAAGGGACAAAGTTAATAA GGAGCTCCAACTTGCTCGAGATCAGAAGACATCACTACGGAATCAAATTACATCAACTGAACTTACCATGAAGGATTTGG AGCAGAAGATTATGTCTGCTGTGGATCTGTTACAAAACTGCAAGAATGAACGAGATGATTTGCAAATTCAGCGCGATAAT GCTTTGAGAGAGGCTGAAAATTTTAAAAAAGAACAAGGAGAGGCCTCAAGCACACATCATGTGCTTCCACTCTTCTCTGA ATTCTCTTTCTCAGAGATTGTAGAAGCAACAGGTAACTTCAATCCATCCATGAAGATTGGTGAAGGTGGATATGGAAGTA TATTCAGAGGTATCCTGCGTCACACTGAGGTGGCTATCAAAATGTTGAACCCCAACAGCACACAAGGACCCTCAGAGTTC CAACAGGAGGTAGATCAATGGTTTGAGTGTTGTTTGATATTTTCAACAGCATCCTATTTTGGTCTGCAGTAATCTTTTAT AGCTGGTTACATTATAATCTGAAACATCTACCCTAAATTCTAAGATAGTACCAGAATCAATCTTAGACCTATTTATTGGG CTACCTGCATATGTCCAATTCTGCAAAGTTAACGCTCCAGATGTCCATCCCTGGCATGAGGGATGTGTTAAGGTCTCATA TTGACAAGGCTTATGTCCAAAATAGTCCTTAAAAATGGTAGAGAAATCCTCACCTTTGACCTAACTTTTGGGGTAGACTT AGGCCTAACCCGAATTCTAAGATATCTTAAATTGGTTGTAATATATTAAGTTAATATATGTAAGGCTATGAGGCGGAATT TGATCTTAACTTGTCTAGATTTGCACTGAAAGTGTGAAACAAGTATATGTTTTGACCCCACTTTTGATTTTGTATCAGGT TGAAGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTATAGGAGCCTGCCCAGAATCATGGACTCTTGTCTATG AGTATCTCCCCAATGGAAGCCTTGAAGATCGTCTCTGTTGCAAGGATAACACGCATGCATTATCGTGGCAAACTCGGATA AACATTGCGACAGAACTATGTTCTGCTCTCATTTTTCTCCACTCTAGTAAACCTCACAGCATAGTGCATGCTGACTTAAA ACCCTCCAACATTCTCCTTGATGCAAACCTTGTTAGTAAGCTCAGCGACTTCGGGATCTGCCGCGTACTATCCTGTCAAG AGGATTCTAGTAACAATAGCACAGAGTTTTGGAGAACTATGCCAAAAGGAACTTTTGTGTACATGGATCCTGAATTCCTC AATTCAGGGGAACTTACTGAAAAATCAGATGTTTATTCATTTGGTATCATACTTTTGAGGTTGATTACTGGGAGACCAGC CTTGGGAATAATAAAAGAAGTGCAATGTGCTTTGCATGCTGGCAAGTTGAAATCCCTCTTGGATCCTTTGTCTGGAGACT TGCCATTTGAGCAGGCTGAGAAGTTGGCTTGCTTGGCTTTGAGGTGTTGTGATATGAACAGAAATAGCAGGCCAAACCTT CATTCAGATGTATGGAGGACACTGGAGCTAATGAGGGCATCTTGTGGAGGCACACACACCTTTGAACTAAGTTCTCAAGG GCACTGCCAGCCTCCTCCATATTTTATTTGTCCTATCTTACAGGTGACTACCTCTTTCCATCTTCATTTTCAGTTTGAGT TCATTCAAAATGATAGATTTTACTGCTCTAAAGTGAGAGAGTTGCTTCAAGGGTAAAGTTATCACAACCATTGATTGAGA AATTAACGGTTACAATTTAAAGAACATTGTAATTTGTTATGCATGTGTAAGTATACCATGACAATCTCAATCATGGTCAT TTAGATTTAGCTCATCTAAAGTGAGGGAGACACTTTAGGAGTCCGGCTCCTCTAAAGTGAGTACAAAGTAAGTCATCACA ACCATTGATTGGGTTTCTTTATTGACTTTTCAAAGTAGGTACTCACTATTAATGATTATGACGACTTACTTTCTAATGTG ACCATCTCACTTTAGAGGAGCCAAATCCACACTTTAGAGCATAAAGTAAATCACCACAACCATTGATTTAGGATAAGTAG TTGAGATTTAAAGAACATCACAATTTAATAAATTTATTACAATGTGCAAGTATATGATCCCAACCTCAACCACTTATTTG TCAATCAACAATTGTGATGACTTTCTTTACCTTCTATAGTGACTCCCTCACTTTAAAGAATGGTGAGACCCACATGCATT TCGACCCATAAAAGAGAGTTGAAAAGAGTGTTAAAGTGAATGTTGTTACAACTAATCTTGGAACAATGAACAATTCAAGC AAATGAAATGCACCCCTGTAGTCAATTGTCCTTGAAAGTTCTACATACTCTTGGCTTGTTGTGAATAAATTTTACCTTGC ATTTATTTCAAAAACTGAGTGAACTAGCTAATACTTGGCTATTCCCAACTCCCAATCTTATTTTATATCTTTTTAAGCTT CATATTCATGCAAAGATTTTCCAAATCCATGGATCAATGAATCATAGAGCTTTGAATAGAAAAATCATCTAGGAAAGTTC CTCCTCATAATGTTCCTACTTTGCAGGAAGTCATGCGAGATCCACATGTGGCTGCAGATGGTTTCACTTATGAAGCTGAA GCTATACGAGGATGGCTGGAAAGCGGTCATGACACTTCACCAAGGACAAGTTCTAAGCTTACACATTACAATCTTGTTTC CAACCATGCTCTCCGCTATGCAATCCAGGACTGGCTTCAAAGTCATTGATCAAGCTTCTCATTTTCTCTCTTAACATTTG ATTAAATTGTAGCTTGCATGTTTACATTAAGTTTCTAGGAGAAAGCTGTTATTACAAGTGTTTTCTTCTATCAGTTTTGT TTCTTTACAGGTCTTTAAAATATGGAAACCACATTTTATAGCCATCCTGTTGTATAGGTTCTAGTTGTACCCAATCTACC CATGTGTTTATTTATCTTAAGTTAATGTAAAAGAGAAGCATGTATGATGTACATAGCTACTTATGGCAGTAGAGTTTGTT GTGTAATTATCTATAGTTTCAATTAGAATTTTTAAAGTGGAATAATGTGTTTCTCC
CDS sequence (LotjaGi3g1v0383900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAACACTGAAGTTGGGCTTTTAACTCACTTTAGATCTCATTCTGTTTCCTTTGGGAAAAGTGTGAAAGATCAAGT GTTATTTCGCAGAGCAAGCTCCACCAATGATGGACATGGAAAGAGCATTGCATCTGTTTTCTCACCGTGCTCTCAGAGTG GTTCAGTAATGAGCCCAAATTTGATTAATGATGGAAGTGAAAATGTATTGGAATTGAGTTTGAGGGGACTTTCTAGTATT AAAGAGGATCTCCATCATTCATCGCCTCCTAGTGTGCTGGATGGTGGAATGAATGATACTCTTTATGATCAACTAGAGCA GGCAATGTCTGAGGCTGAGAATGCTAGGTGTGATGTGTATCAAGAAGCTCTTAGGCGTGGGAAAGCTGAAAAATTTGCCA TTGATGCTATACGCAGGACTAAAGCCACTGAAATCATGTATAAAGAAGAGCTGAAACAAAGGAAAGAGGCAGAGGAAGAA CTAGACAATGCAAAAGCAGAAATTGATAACATGATTAGCCAAAGGGACAAAGTTAATAAGGAGCTCCAACTTGCTCGAGA TCAGAAGACATCACTACGGAATCAAATTACATCAACTGAACTTACCATGAAGGATTTGGAGCAGAAGATTATGTCTGCTG TGGATCTGTTACAAAACTGCAAGAATGAACGAGATGATTTGCAAATTCAGCGCGATAATGCTTTGAGAGAGGCTGAAAAT TTTAAAAAAGAACAAGGAGAGGCCTCAAGCACACATCATGTGCTTCCACTCTTCTCTGAATTCTCTTTCTCAGAGATTGT AGAAGCAACAGGTAACTTCAATCCATCCATGAAGATTGGTGAAGGTGGATATGGAAGTATATTCAGAGGTATCCTGCGTC ACACTGAGGTGGCTATCAAAATGTTGAACCCCAACAGCACACAAGGACCCTCAGAGTTCCAACAGGAGGTTGAAGTATTG AGCAAGTTAAGGCATCCAAATCTTATCACACTTATAGGAGCCTGCCCAGAATCATGGACTCTTGTCTATGAGTATCTCCC CAATGGAAGCCTTGAAGATCGTCTCTGTTGCAAGGATAACACGCATGCATTATCGTGGCAAACTCGGATAAACATTGCGA CAGAACTATGTTCTGCTCTCATTTTTCTCCACTCTAGTAAACCTCACAGCATAGTGCATGCTGACTTAAAACCCTCCAAC ATTCTCCTTGATGCAAACCTTGTTAGTAAGCTCAGCGACTTCGGGATCTGCCGCGTACTATCCTGTCAAGAGGATTCTAG TAACAATAGCACAGAGTTTTGGAGAACTATGCCAAAAGGAACTTTTGTGTACATGGATCCTGAATTCCTCAATTCAGGGG AACTTACTGAAAAATCAGATGTTTATTCATTTGGTATCATACTTTTGAGGTTGATTACTGGGAGACCAGCCTTGGGAATA ATAAAAGAAGTGCAATGTGCTTTGCATGCTGGCAAGTTGAAATCCCTCTTGGATCCTTTGTCTGGAGACTTGCCATTTGA GCAGGCTGAGAAGTTGGCTTGCTTGGCTTTGAGGTGTTGTGATATGAACAGAAATAGCAGGCCAAACCTTCATTCAGATG TATGGAGGACACTGGAGCTAATGAGGGCATCTTGTGGAGGCACACACACCTTTGAACTAAGTTCTCAAGGGCACTGCCAG CCTCCTCCATATTTTATTTGTCCTATCTTACAGGAAGTCATGCGAGATCCACATGTGGCTGCAGATGGTTTCACTTATGA AGCTGAAGCTATACGAGGATGGCTGGAAAGCGGTCATGACACTTCACCAAGGACAAGTTCTAAGCTTACACATTACAATC TTGTTTCCAACCATGCTCTCCGCTATGCAATCCAGGACTGGCTTCAAAGTCATTGA
Protein sequence (LotjaGi3g1v0383900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPNTEVGLLTHFRSHSVSFGKSVKDQVLFRRASSTNDGHGKSIASVFSPCSQSGSVMSPNLINDGSENVLELSLRGLSSI KEDLHHSSPPSVLDGGMNDTLYDQLEQAMSEAENARCDVYQEALRRGKAEKFAIDAIRRTKATEIMYKEELKQRKEAEEE LDNAKAEIDNMISQRDKVNKELQLARDQKTSLRNQITSTELTMKDLEQKIMSAVDLLQNCKNERDDLQIQRDNALREAEN FKKEQGEASSTHHVLPLFSEFSFSEIVEATGNFNPSMKIGEGGYGSIFRGILRHTEVAIKMLNPNSTQGPSEFQQEVEVL SKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLCCKDNTHALSWQTRINIATELCSALIFLHSSKPHSIVHADLKPSN ILLDANLVSKLSDFGICRVLSCQEDSSNNSTEFWRTMPKGTFVYMDPEFLNSGELTEKSDVYSFGIILLRLITGRPALGI IKEVQCALHAGKLKSLLDPLSGDLPFEQAEKLACLALRCCDMNRNSRPNLHSDVWRTLELMRASCGGTHTFELSSQGHCQ PPPYFICPILQEVMRDPHVAADGFTYEAEAIRGWLESGHDTSPRTSSKLTHYNLVSNHALRYAIQDWLQSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 33 | 631 | 599 | 3.3E-300 | – | |
PANTHER | 33 | 631 | 599 | 3.3E-300 | – | |
Coils | 98 | 118 | 21 | - | – | |
Coils | 140 | 244 | 105 | - | – | |
Gene3D | 242 | 345 | 104 | 6.1E-27 | – | |
SUPERFAMILY | 249 | 531 | 283 | 5.53E-69 | ||
ProSiteProfiles | 273 | 552 | 280 | 35.128 | ||
SMART | 273 | 541 | 269 | 1.0E-35 | ||
Pfam | 276 | 531 | 256 | 4.4E-43 | ||
ProSitePatterns | 279 | 300 | 22 | - | ||
Gene3D | 346 | 550 | 205 | 1.8E-47 | – | |
ProSitePatterns | 391 | 403 | 13 | - | ||
SUPERFAMILY | 556 | 630 | 75 | 8.74E-24 | – | |
ProSiteProfiles | 560 | 631 | 72 | 33.155 | ||
Gene3D | 560 | 631 | 72 | 1.9E-26 | ||
Pfam | 562 | 631 | 70 | 1.3E-17 | ||
SMART | 564 | 627 | 64 | 1.3E-26 | ||
CDD | 565 | 605 | 41 | 1.15871E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi3g1v0383900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…