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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0383900 |
| Transcript ID | LotjaGi3g1v0383900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G45910.1 U-box domain-containing protein kinase family protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|A0A0R0J4K3|A0A0R0J4K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0383900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77824195..77828109) extracted from Lotus japonicus Gifu genome v1.2.
AGGGATCGCAGTTTGAGTGGAGGAAATGTAGGGGTCACATCTCCTTTGGTGCAGCAAATGCCAAACACTGAAGTTGGGCT TTTAACTCACTTTAGATCTCATTCTGTTTCCTTTGGGAAAAGTGTGAAAGATCAAGTGTTATTTCGCAGAGCAAGCTCCA CCAATGATGGACATGGAAAGAGCATTGCATCTGTTTTCTCACCGTGCTCTCAGAGTGGTTCAGTAATGAGCCCAAATTTG ATTAATGATGGAAGTGAAAATGTATTGGAATTGAGTTTGAGGGGACTTTCTAGTATTAAAGAGGATCTCCATCATTCATC GCCTCCTAGTGTGCTGGTACTTACATACTTCCTAATGTTCGAGTCATTTGGCGATAGAAAATCTTGATCCGTTTTTTATT GAGTTTTTGCAATTGAATTTATGATATGTAACACTTAATTTGATTTATTGAACATTGTGAACACTAGCAGGATGGTGGAA TGAATGATACTCTTTATGATCAACTAGAGCAGGCAATGTCTGAGGCTGAGAATGCTAGGTGTGATGTGTATCAAGAAGCT CTTAGGCGTGGGAAAGCTGAAAAATTTGCCATTGATGCTATACGCAGGGTAATTGTTCTTCTCAGCTTTTAATGTAAAGG TTCTTGACCTTGCATCTTCTAATATATTTTAATGTGGTTTCATGCAAATATTTGAACCATTCAATTTACAGACTAAAGCC ACTGAAATCATGTATAAAGAAGAGCTGAAACAAAGGAAAGAGGCAGAGGAAGAACTAGACAATGCAAAAGCAGAAATTGA TAACATGATTAGCCAAAGGGACAAAGTTAATAAGGAGCTCCAACTTGCTCGAGATCAGAAGACATCACTACGGAATCAAA TTACATCAACTGAACTTACCATGAAGGATTTGGAGCAGAAGATTATGTCTGCTGTGGATCTGTTACAAAACTGCAAGAAT GAACGAGATGATTTGCAAATTCAGCGCGATAATGCTTTGAGAGAGGCTGAAAATTTTAAAAAAGAACAAGGAGAGGCCTC AAGCACACATCATGTGCTTCCACTCTTCTCTGAATTCTCTTTCTCAGAGATTGTAGAAGCAACAGGTAACTTCAATCCAT CCATGAAGATTGGTGAAGGTGGATATGGAAGTATATTCAGAGGTATCCTGCGTCACACTGAGGTGGCTATCAAAATGTTG AACCCCAACAGCACACAAGGACCCTCAGAGTTCCAACAGGAGGTAGATCAATGGTTTGAGTGTTGTTTGATATTTTCAAC AGCATCCTATTTTGGTCTGCAGTAATCTTTTATAGCTGGTTACATTATAATCTGAAACATCTACCCTAAATTCTAAGATA GTACCAGAATCAATCTTAGACCTATTTATTGGGCTACCTGCATATGTCCAATTCTGCAAAGTTAACGCTCCAGATGTCCA TCCCTGGCATGAGGGATGTGTTAAGGTCTCATATTGACAAGGCTTATGTCCAAAATAGTCCTTAAAAATGGTAGAGAAAT CCTCACCTTTGACCTAACTTTTGGGGTAGACTTAGGCCTAACCCGAATTCTAAGATATCTTAAATTGGTTGTAATATATT AAGTTAATATATGTAAGGCTATGAGGCGGAATTTGATCTTAACTTGTCTAGATTTGCACTGAAAGTGTGAAACAAGTATA TGTTTTGACCCCACTTTTGATTTTGTATCAGGTTGAAGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTATAG GAGCCTGCCCAGAATCATGGACTCTTGTCTATGAGTATCTCCCCAATGGAAGCCTTGAAGATCGTCTCTGTTGCAAGGAT AACACGCATGCATTATCGTGGCAAACTCGGATAAACATTGCGACAGAACTATGTTCTGCTCTCATTTTTCTCCACTCTAG TAAACCTCACAGCATAGTGCATGCTGACTTAAAACCCTCCAACATTCTCCTTGATGCAAACCTTGTTAGTAAGCTCAGCG ACTTCGGGATCTGCCGCGTACTATCCTGTCAAGAGGATTCTAGTAACAATAGCACAGAGTTTTGGAGAACTATGCCAAAA GGAACTTTTGTGTACATGGATCCTGAATTCCTCAATTCAGGGGAACTTACTGAAAAATCAGATGTTTATTCATTTGGTAT CATACTTTTGAGGTTGATTACTGGGAGACCAGCCTTGGGAATAATAAAAGAAGTGCAATGTGCTTTGCATGCTGGCAAGT TGAAATCCCTCTTGGATCCTTTGTCTGGAGACTTGCCATTTGAGCAGGCTGAGAAGTTGGCTTGCTTGGCTTTGAGGTGT TGTGATATGAACAGAAATAGCAGGCCAAACCTTCATTCAGATGTATGGAGGACACTGGAGCTAATGAGGGCATCTTGTGG AGGCACACACACCTTTGAACTAAGTTCTCAAGGGCACTGCCAGCCTCCTCCATATTTTATTTGTCCTATCTTACAGGTGA CTACCTCTTTCCATCTTCATTTTCAGTTTGAGTTCATTCAAAATGATAGATTTTACTGCTCTAAAGTGAGAGAGTTGCTT CAAGGGTAAAGTTATCACAACCATTGATTGAGAAATTAACGGTTACAATTTAAAGAACATTGTAATTTGTTATGCATGTG TAAGTATACCATGACAATCTCAATCATGGTCATTTAGATTTAGCTCATCTAAAGTGAGGGAGACACTTTAGGAGTCCGGC TCCTCTAAAGTGAGTACAAAGTAAGTCATCACAACCATTGATTGGGTTTCTTTATTGACTTTTCAAAGTAGGTACTCACT ATTAATGATTATGACGACTTACTTTCTAATGTGACCATCTCACTTTAGAGGAGCCAAATCCACACTTTAGAGCATAAAGT AAATCACCACAACCATTGATTTAGGATAAGTAGTTGAGATTTAAAGAACATCACAATTTAATAAATTTATTACAATGTGC AAGTATATGATCCCAACCTCAACCACTTATTTGTCAATCAACAATTGTGATGACTTTCTTTACCTTCTATAGTGACTCCC TCACTTTAAAGAATGGTGAGACCCACATGCATTTCGACCCATAAAAGAGAGTTGAAAAGAGTGTTAAAGTGAATGTTGTT ACAACTAATCTTGGAACAATGAACAATTCAAGCAAATGAAATGCACCCCTGTAGTCAATTGTCCTTGAAAGTTCTACATA CTCTTGGCTTGTTGTGAATAAATTTTACCTTGCATTTATTTCAAAAACTGAGTGAACTAGCTAATACTTGGCTATTCCCA ACTCCCAATCTTATTTTATATCTTTTTAAGCTTCATATTCATGCAAAGATTTTCCAAATCCATGGATCAATGAATCATAG AGCTTTGAATAGAAAAATCATCTAGGAAAGTTCCTCCTCATAATGTTCCTACTTTGCAGGAAGTCATGCGAGATCCACAT GTGGCTGCAGATGGTTTCACTTATGAAGCTGAAGCTATACGAGGATGGCTGGAAAGCGGTCATGACACTTCACCAAGGAC AAGTTCTAAGCTTACACATTACAATCTTGTTTCCAACCATGCTCTCCGCTATGCAATCCAGGACTGGCTTCAAAGTCATT GATCAAGCTTCTCATTTTCTCTCTTAACATTTGATTAAATTGTAGCTTGCATGTTTACATTAAGTTTCTAGGAGAAAGCT GTTATTACAAGTGTTTTCTTCTATCAGTTTTGTTTCTTTACAGGTCTTTAAAATATGGAAACCACATTTTATAGCCATCC TGTTGTATAGGTTCTAGTTGTACCCAATCTACCCATGTGTTTATTTATCTTAAGTTAATGTAAAAGAGAAGCATGTATGA TGTACATAGCTACTTATGGCAGTAGAGTTTGTTGTGTAATTATCTATAGTTTCAATTAGAATTTTTAAAGTGGAA
CDS sequence (LotjaGi3g1v0383900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAACACTGAAGTTGGGCTTTTAACTCACTTTAGATCTCATTCTGTTTCCTTTGGGAAAAGTGTGAAAGATCAAGT GTTATTTCGCAGAGCAAGCTCCACCAATGATGGACATGGAAAGAGCATTGCATCTGTTTTCTCACCGTGCTCTCAGAGTG GTTCAGTAATGAGCCCAAATTTGATTAATGATGGAAGTGAAAATGTATTGGAATTGAGTTTGAGGGGACTTTCTAGTATT AAAGAGGATCTCCATCATTCATCGCCTCCTAGTGTGCTGCAGGATGGTGGAATGAATGATACTCTTTATGATCAACTAGA GCAGGCAATGTCTGAGGCTGAGAATGCTAGGTGTGATGTGTATCAAGAAGCTCTTAGGCGTGGGAAAGCTGAAAAATTTG CCATTGATGCTATACGCAGGACTAAAGCCACTGAAATCATGTATAAAGAAGAGCTGAAACAAAGGAAAGAGGCAGAGGAA GAACTAGACAATGCAAAAGCAGAAATTGATAACATGATTAGCCAAAGGGACAAAGTTAATAAGGAGCTCCAACTTGCTCG AGATCAGAAGACATCACTACGGAATCAAATTACATCAACTGAACTTACCATGAAGGATTTGGAGCAGAAGATTATGTCTG CTGTGGATCTGTTACAAAACTGCAAGAATGAACGAGATGATTTGCAAATTCAGCGCGATAATGCTTTGAGAGAGGCTGAA AATTTTAAAAAAGAACAAGGAGAGGCCTCAAGCACACATCATGTGCTTCCACTCTTCTCTGAATTCTCTTTCTCAGAGAT TGTAGAAGCAACAGGTAACTTCAATCCATCCATGAAGATTGGTGAAGGTGGATATGGAAGTATATTCAGAGGTATCCTGC GTCACACTGAGGTGGCTATCAAAATGTTGAACCCCAACAGCACACAAGGACCCTCAGAGTTCCAACAGGAGGTTGAAGTA TTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTATAGGAGCCTGCCCAGAATCATGGACTCTTGTCTATGAGTATCT CCCCAATGGAAGCCTTGAAGATCGTCTCTGTTGCAAGGATAACACGCATGCATTATCGTGGCAAACTCGGATAAACATTG CGACAGAACTATGTTCTGCTCTCATTTTTCTCCACTCTAGTAAACCTCACAGCATAGTGCATGCTGACTTAAAACCCTCC AACATTCTCCTTGATGCAAACCTTGTTAGTAAGCTCAGCGACTTCGGGATCTGCCGCGTACTATCCTGTCAAGAGGATTC TAGTAACAATAGCACAGAGTTTTGGAGAACTATGCCAAAAGGAACTTTTGTGTACATGGATCCTGAATTCCTCAATTCAG GGGAACTTACTGAAAAATCAGATGTTTATTCATTTGGTATCATACTTTTGAGGTTGATTACTGGGAGACCAGCCTTGGGA ATAATAAAAGAAGTGCAATGTGCTTTGCATGCTGGCAAGTTGAAATCCCTCTTGGATCCTTTGTCTGGAGACTTGCCATT TGAGCAGGCTGAGAAGTTGGCTTGCTTGGCTTTGAGGTGTTGTGATATGAACAGAAATAGCAGGCCAAACCTTCATTCAG ATGTATGGAGGACACTGGAGCTAATGAGGGCATCTTGTGGAGGCACACACACCTTTGAACTAAGTTCTCAAGGGCACTGC CAGCCTCCTCCATATTTTATTTGTCCTATCTTACAGGAAGTCATGCGAGATCCACATGTGGCTGCAGATGGTTTCACTTA TGAAGCTGAAGCTATACGAGGATGGCTGGAAAGCGGTCATGACACTTCACCAAGGACAAGTTCTAAGCTTACACATTACA ATCTTGTTTCCAACCATGCTCTCCGCTATGCAATCCAGGACTGGCTTCAAAGTCATTGA
Protein sequence (LotjaGi3g1v0383900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPNTEVGLLTHFRSHSVSFGKSVKDQVLFRRASSTNDGHGKSIASVFSPCSQSGSVMSPNLINDGSENVLELSLRGLSSI KEDLHHSSPPSVLQDGGMNDTLYDQLEQAMSEAENARCDVYQEALRRGKAEKFAIDAIRRTKATEIMYKEELKQRKEAEE ELDNAKAEIDNMISQRDKVNKELQLARDQKTSLRNQITSTELTMKDLEQKIMSAVDLLQNCKNERDDLQIQRDNALREAE NFKKEQGEASSTHHVLPLFSEFSFSEIVEATGNFNPSMKIGEGGYGSIFRGILRHTEVAIKMLNPNSTQGPSEFQQEVEV LSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLCCKDNTHALSWQTRINIATELCSALIFLHSSKPHSIVHADLKPS NILLDANLVSKLSDFGICRVLSCQEDSSNNSTEFWRTMPKGTFVYMDPEFLNSGELTEKSDVYSFGIILLRLITGRPALG IIKEVQCALHAGKLKSLLDPLSGDLPFEQAEKLACLALRCCDMNRNSRPNLHSDVWRTLELMRASCGGTHTFELSSQGHC QPPPYFICPILQEVMRDPHVAADGFTYEAEAIRGWLESGHDTSPRTSSKLTHYNLVSNHALRYAIQDWLQSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 632 | 600 | 1.2E-300 | – | |
| PANTHER | 33 | 632 | 600 | 1.2E-300 | – | |
| Coils | 99 | 119 | 21 | - | – | |
| Coils | 141 | 245 | 105 | - | – | |
| Gene3D | 243 | 346 | 104 | 6.1E-27 | – | |
| SUPERFAMILY | 250 | 532 | 283 | 5.53E-69 | ||
| SMART | 274 | 542 | 269 | 1.0E-35 | ||
| ProSiteProfiles | 274 | 553 | 280 | 35.128 | ||
| Pfam | 277 | 532 | 256 | 4.4E-43 | ||
| ProSitePatterns | 280 | 301 | 22 | - | ||
| Gene3D | 347 | 551 | 205 | 1.8E-47 | – | |
| ProSitePatterns | 392 | 404 | 13 | - | ||
| SUPERFAMILY | 557 | 631 | 75 | 8.74E-24 | – | |
| ProSiteProfiles | 561 | 632 | 72 | 33.155 | ||
| Gene3D | 561 | 632 | 72 | 1.9E-26 | ||
| Pfam | 563 | 632 | 70 | 1.3E-17 | ||
| SMART | 565 | 628 | 64 | 1.3E-26 | ||
| CDD | 566 | 606 | 41 | 1.16063E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi3g1v0383900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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