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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0385400 |
| Transcript ID | LotjaGi3g1v0385400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein 8B; TAIR: AT2G46060.1 transmembrane protein-like protein; Swiss-Prot: sp|A6NDV4|TMM8B_HUMAN Transmembrane protein 8B; TrEMBL-Plants: tr|A0A151UCT6|A0A151UCT6_CAJCA Transmembrane protein 8B; Found in the gene: LotjaGi3g1v0385400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78056910..78065779) extracted from Lotus japonicus Gifu genome v1.2.
CTACCCGACCCATTGCCATCCCTAGTTTACACCTTTGTATTTTCATTCTCTTAGAAACCACCTGGGAATCACAAAAAAAA AACATGTCTCTCAATTCGATTCGGTGGCGTCATCATCTCAACGTGATTCTTCTGCTCAGTGCTCTGTTACTTCATTGTGC TCTCTCCTCTGCAAATGATGAAGTGGGCACCACTGGTGACTTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACTC TTAGACCCTTTGATTTCCGCTATATCAGAGGTGTGTCACCCAGTAGTTATTCATTGACCCTTTTCTTTGTTTACACGTTT GAGTTGGTTTATTGTTGCTGTTGTTCATTAAGATTGTACCTTTACACTGTTGAGTTTAATGGGTAGGGACTGAATTTTCA TGTGTGTTGGTGGATTTATGATGGAATAGTCTGGTGTACTTGATTTATCATTGTTCAATAATCCCTAGTCTTCAAATTGT TGTTGGTTTGAATAGTCTAAGACTCTTAGGTAAGTGATTATGCAACTGTTCTGAATTAAACCCCCTTGAGGGAAACTGAG GAGATTTGCAACAAGTTAATGATGCTGATCTTTTGAGGGTTTTGAGAATTTTGAATTGAAATAAGTAAAATGCTTTTTTT TTCACATTATTTTGTTGTTAATAGCCTTTTAATGTGGTTATAACTTATAATTGAGTAATTTGAATCTCTGGAAGAGCCAT GACTTGAGATCAAGAACATGCATGATACAATCTTATGATTGTGGGTTGTCATATGTTCTCTAATTTGTGATGCATTGAAT TATGCCTTGACTAAGAGTTGCTACTTGCTACAGTTCTGTCTGTAATTTTTGAGGTAGATGATTTGTGAGCTTTTTTGCTG TCTCATTCAAGGCTTCTTTCTTTCCCTGCCAGTGATTGGTTCATCACTGAAGTGTACTTCGTTGCTTATGTTAGATTTAG TATAAGTTATTGGCACTTTTAAGATGTTGTGTTTATGGCTAAGTTACTGTTATGCATGAAATCCCAATATCAGTAGGAAA TGATTATAATCAGCTCTTTCAGATTGGAACAGAGATGAGAAAGAGCTATAATATAACCTGAGAAGCTAACATTTTCCGCT TTTTACTTGTTTAGGCAATTCAATTTGTTATAAGATACAATATTGTAATTTTGAGCAAACAAATATTAAATCTGTGTCAG AATTATGATGAGCTCACTTTGTCCCTTGATATTTTCTCATATTCCAGTTGATATACCACCGTGGTTCTCTGCAGTAACCA TAGCATTGAAGTCAGATGTAGACCTAGTAAGTATGTCTATAATTCTTGGCAGCTAGAAGCACGTTTAGAATACTTGCATG CATCTGTGTTGATGTCTGTTACCTGCAAATACCGTTGTACCTTTGAATTAAATTTATTTACATTCTTCGATTTTTGTTTC TAACTGGTGCTCTAAGGTTTTTTCTTTGTTACAGATGTACTCAGTACAGATAATAATGCAAATGAGTTAGTTCTTTGATT AAAATCCTATATCTCTAGTCTTGTGTCTTTTTAGTTTTCATTATACAAATTTCTTTTTTATCATTTAAGTTGTTATTTAT CTGTTTAAATTGCTTCATTGCTGGTTCTGCTACAGAAAATTACATTGAGAACCTGATTTCTGGATATATTCTTGCTGTTG AATCGGCTTTGACTTATTTGTCTCCCTCATTGGTATAAATGTATTTTTTTCAGGATGTTACAAGAATTGAAAGGGTTCCA AAAAGCACCCTACCAATTATATGCTTTAGAGATGGAAGTCCTCCGCTACCAGATGTTTTAAACACATCTCTAAAAGATTC AGCTGTCTCAGGTAGAAGCCCCACCTGAATATATTTATACCAAGTTAATTTAACTGTTTTATAAACTTGAAATTTTTCGG CACATAGATTCTATGCTAAATTTTGTTCTAAGATATTTGTAAACTTGTAACATTTTTATTCATCAACATGACAGAACCAT TGTAGCCCCAATAAATTCTTACTAACCATTAAATTAGCATTATAATTTGTGATGTTTTTAGTCCCTGCGCGCCATTATTT TACCTGCACTACCATGATTGTTTCTTTTGGCTGTCATGTAATGGATGAATACTGAACTCATGAACCTGTAATGTTTTCTT CAATGTGTAATTTGTGTTTCACTTTGATTTGAGGCACTATGACATTACTGGTTCACTTGTTCTTCCTCTTGTTCTCTGAC TCCTTCTTGACCAAGAAAAAAAACTTTATTTTAACTGTTTAATGCTGTGCCACTTTAAAATTACTTTTTTTCACCCCTTT TTTCCTTAGGAATAAATGGTCTTGATGTGGAGCAATGCTTTCCTATGGAGAAAAATATCAGTATGAAATTGACGAATGAG CAGGTTTTGTTTTAAGTTCTTTCTATTTTCAGCAATATCTTTATTTGTTTGTAATAGTATTGTATCTTCAAGTTCAGTGT TTCCTTTTCTTTGAGGTCCATAATGACTTAGCTATATCTGCCTTTATATGAAAAATCCTATTTTATAATGGGAACGGATT GGACCAATTTTGCTTAGTCCTTTTCTGATTTCATTAACAATAAACATAAGAATTATTGTTCAGATATCTCCAGGTTCTTG GTACATAGGTCTTTTCAATGGCATTGGAGCTACAAGGACACAATCAAAGATGGTATGGTTTATTATCCTAATATTACTTC TATGATATAACGAAGAAATCTGAAAATTCGAAGTATTTTTAATCACATGTTGAATAATTGTTTATCCTTTCCTTTGAGTG CTGCCTTTTTGTGCATCTATATGCTAAAAGGGATACTCCTATGTTGATGCAATTGCTAGCTTTTCACATTAATATGCATA ACTAAATGAAATTCTCCATCCAAAATGTCAGCTTGGAAACAGCATCAAGTGCGGATTTATGCTTCTATTTTTGCACCCCA TCTCAAAACAAATATTCCTTAACTTATTTCCATTTGGCTCCTTCTATCTCTTAGTGGTTCTCGATTCAGTAACTACACAT GGATGGATAATAGTTACTTCTCTACCACTGCAGATTACCCGAGGCCCAGCATACTCCTTTAGTGCCAATATTAGCGTGGC AGCATGCACAAATTCAATGATGAGTGGGAAGTTCTGTAACAGTACAGTCTATCCACTTTCGTGCACAACATCTGATGTCT ATGATACATTGAAGGCTACAATAAAGAAGCCAATCATGGAAAATGCAACGACCTGCAAAAGTAAAATTGAAACTTTTTGT GTTCAGGAAGGTCTACCAAACTTTTACTCCTTGGATATATCAAATGTGGTAGAAGAAGTGACCATTATGGTAGCAAATGT CAGATTAAATATTACATCTTCAAGTAATGCTTCTGGTGCAAGTGATGTTAATTTATTGGGTTTTGCGCGCCATGGTGCAA TACCTGCAGATTCTGTGTTTGATTATTCCAGTAATTTAAATAAAGCCCCGATGGTTATTCGCTCTCCACGGATTGGTCGT TTGTACATTAGTATATTACCAGTTAATCTTACAAAAAAATTTGGAGGGACGCAGGATGGCAATGTAAAAGTTTGCTATTC GATGGAATCACAAGTGCTACAGTGCCCACTTGGGAAAGCTGGACCAAATTGCACAATGGGTAGCTACAATCTTCAGGTAG GATTAGTTACTAGATATGTTTGTTTATTACTTTTTGATGCTGAGGATTTTTTTTCTAAGAAGAATAAATCTAAATTTTAG CAGTGTGATTTAAACTTGCACCTAAGGTTATAACTTCTATATGTAGTGTGATAAACCAACTATCCCAAAAGCTTGTGTTA CATCTCTGACATGCCCCTTCACCCAAGATTCCTTTGGGGTAGATAATGCGCAAGTCATCCTATCTTGTGCCAATCTTCAA CTTTCTTATTAGAAGAGTGGGCCAACAAGGATTGAAACCTGAACCACTTGACCATAAGACCTTTGATATCAAGTTTAGAA CCCTCTATTTCAGAAGTTTCTGTTAGGTAAAACACATGAATGATTTTTTCCCCCATTATATCTCTAAGTGAAAGAACAGG GGTTTGATCACATGTAATTCATAACTTGATGGTTAAAAGAAAAAGATGTAGCAATTGGAAAGAATAAAACGTAATGCTGT ATAAATCTCGTGGTAGAAAATAGAAGACGGCGATAACATCTGCAATGCACGCCTCAAAGTCCATTGGAGTGTGCCTTGTT TTAGTGCACACATTAGCATCCATGTGGTGCGTCTCTTGGAAGGTCTACTCACTAACTTATTTCTTGGGATAAACTGAATT TGTTTTGAAGATTGTTGAGATTTGAACTATTTTACGCCAAATGCTGAAATATAAGGAGTGTAGAACTCGTTCCAACATAT TAGCTTTACTTGTGTAGAAATTAAAATATTAGATTTTTTCACTAAATACTATACGGTGGAATTTTGAAGCATTTTTCATA GATTTAAGCATAACAGCATGCTGTTGTAGAATTAGTTCTATATTTTGATGCCTGAAGATATTTATTTACTCACAGGAATA AGTTATTAACGATAATGGTTTTCTGCAGACAGTTCTAAGGAAAGGTCCAACCCCCTTTGAATCATATTATTTACCTGTCG GTGAAGGAGCATCTTCTGCCAACTTTCCTCTTGAGCCACTTTCTAACAGCTCATCAAACAGAGGAGAAACTAATGACATT TGGACTTACTTCACTTTCGACATTCCTCGTGGGGCAGCTGGACGAAATATTCATGTACGGCTATCCTCAGATGTGAAGAT CAGTTATGAAGTTTATGCTAGATTTGGCGGATTGCCTTCTCTTGATAGCTGGGACTACTATTATGCTAACGAGACAAAGA AGAGTGATCAATCCATGTTCTTCATGGAATACGATTCAAGTGATGACAATATTGATTTTTACATTATTTATGCTAGAGAA GGAACTTGGGGTTTTGGTCTAAGACATCTTAATACTAGCAGTGATTCTTTGAAACAGCAAACTATCATGTCTTTGGCACT TGAAGGGTGCCCAAAACATTGCTCCTTTCATGGGGACTGTAAATATTCTTTTGATGCGAGTGGATTGACATCATACAGGT TCTTCTTCTTAATTTATCGTTCTATTTACATTTTATTTGTTTTACAATACTAGACAAGACCTGTGCGAGTAATTGGTATT GACCGAGACGCTGATTAAATAATCAGATAATATATTGAACATTTTCCTGATTACATAGTTTGTGTTTGTTTCGGTACTTC CCAAGGATATTTACTATTTTTAATGTTCACTTTTTGCCTCAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACT GTAGCGTGGAAATTGTATCACATAAAGGTGATTGCTAATTTTAGAAATTGATCAACTTGGTGTTTCTATTTATTGGTTAA ACTCGTATTATATTACCTGAATCCCTCCATTTCTTTGTCATATTATTTTTATCTGATTTTTTGCTACGATTTAGATCAGA TATTTTTAAGTGACAGCATCTGGCAGAGAACCGAAACTAATTTACATGTGGCCAATGTCCTTTTTCCTTTATTTTTTTTA CATTCAATGATATATCCATAATGATTCGCTGCAACCAATATCAATGTATCTTTTTGAAGTAGGTAAATATAGTGAGTTTC AGTCAAGTTCAGTTTTGAGATATAGATAAAAAAGAGTGTAGCAACACTCATTTCAACACTCACTCATTCATTGGTTAAAA TGTATGTGGACCCCACTAAATTGGATGTGAGGCCCATATTTTTAGTGGACCCTACATACATTTCAACCAATCAATAAGAG TGTTGGAAGGAGAGTGTCAAAGTGAGTGTCGTTAGCATTTAAAAGTCAAGTATGCTTTGCTCCTGTTTTTATCTTTGATT TGTTAAATCTATTGTTAGATATCTTGTAAATAAGTAGGATATCTTTTATTTATGGTTATTAAGTAACCTAATCATGTAAA TAGGGAAATAGGATATTTCTAGGGTATTTTGTATTTATTGTGTCTTTATGGTGCCTATTATATATAATGACCTCCGTTGT GTAGTTTAGACACACGGATTAAATCTCATATTGTCTCTCGTTTCTCCTAATTTTACATTTATAGATTTACTATTGTGTTT AGTTTATGATGTGCTGCAAGGAATTTTATATATACTTGGTTCTTTAATCCAGTTATTGAAAAATATTGCAGGGCATGTCC TGCAATCAATTTTTCTCATCGCATCAAATGCTGCAGCCATATTTCCTGCCTATTGGGCCCTTCGCCAGAAGGTAGTTCTT GTCCTTTTTTATCTACGTTTCCACCACAATTATTTGGTTATATTATGATTTGATTACCCAAGTAAGAAAATTGATTGTGA CTATAAAATTGTATATAAACTTCTATGTCGAGGATAAATAATTCCAGACTTGTAAGTTAACTTAGTCATGAGAGAAACAA TTCAGATTCCATAGAAGTACATGTGTTGTGTGTGTCTTGCTGAGTGCTGACAGTGGAACCCATAATTCCCTATATGCAGG CCCTTGCAGAATGGATTTTGTTCACGTCAAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTAGGCACCTGGTGT GCATTAAACTACAATGTTCTACAGGTTTCAGCTTTGCCTTTAGTGGTCTCTCTCACTCTATTTTAAAATAAAATAAAAAA TTACTAAACTAAAAGTGTTACCAACATCAGATAAAGGAAGTTATTATCTCACATAGCAGTTATAAGCTTCAAAAATTCTC TGTATTCTGAGTTCCTAATATGATTCACATTCCTGATGGGATAATTATTGTGTGTTTATTCAAACTTTGGGTGTCAAATC ATAGTAGCTTGTATACATGCTCACATGAGAAGCTAAAAATGTTTTCATTGAAGATATTGGGATATATAGTACAATGCAAG ACACAAAGGCTATAACTGTTTTCCTGGGAATTTACAGTGACTTTCAATATTTCAGTTCATGGACTTCTGGCTCTCTTTCA TGGCTGTTGTTAGCACTTTTGTGTACCTAGCTACTATTGGTGAAGTCTATAAGAGGGCAATCCACACTGCTGTTGCTATA CTTACTGCTCTTATGGCTGCAACTAAGGCAACCAGGTAGATCAAACTACAACCTGTTTGGATACGGACCAAAGATCACTT ATTGGAGCTTATCCAGTGCTTTTTCTAGTAGATAAGCTCCAATAAGTGTTTTTATTCCGTGTCCAAACAGGGTGCTAGTG GACAAAGGATACATGCTGCTAAAGATTTTTAAATTTTGTTCAGGTTTATTTATACTAAACATGTGCAGGTCTTCAAATAT TGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATTGGATGGTTGGCAGAAATTTCAACAAAGTATAGGTCCCTTT CCTTTTCACTTGGATTCTCACCAAATTTCTTTCTAAGGTAAGTTCTCTGTTCTAAGTGAATTGTTGAGCCCAATGTTGTT TGATTTTGAGACAATATAACAGTATTTGATGGTACAATTTTCTGCCCAATACTTTATCTTCCAAGTTATTTTGTGCTCGT GGATTGGTTGTGAAATTGGGATATCTTCCACCCCCTCCCTCTTTTCCCCGAAGTGATGAGTTCTATAGCTGATGGTAGCT TAATCTAGCTGTATGGTACTGTTTAGCATGAGTTCCCCAATTCTATATATGGATATTGGATCAGATGTCACACATGAACC TCTTCCTTATCGTGTGTTTTGGATTTCTGTTAAACTCAACACCGATCCTCGTTAAATTCAACGTGGCAAAATCTTGCTCC TCCATTTGCGTGTTGAGATGTGTTTTTACCCGTTTGCATTGATACAAATGGAAAACCAATTACACTTAAATTGCCAACTT GACATAGTACAACTGTTTTCTCTTTCATTTGATTCATGGTCCATCTCATGTGCACTGATTTTATCGCAAAATAGGGCTGA GGTAATTATAAATTCAAATAGTTATCTTTTCCCCTTGGGTTCATTTAAGGGACAAAGGTGGTGGTGGGAATTAAAGATGA ACCTTAAATCTTCAAGGTGGTCATTGTCATATACTATGTGCTTGAAGATAAAGGTTCTTGGACTAGCTAATGCTATGTCT TAAATATATCAAAATAGTAATGGTGAATTTTCACTGCAGTTTGCAAACTATAAAGCAATGGCTGTATAATCTTGTAAAGA CAATCTTGAGACGGTTCCGCTGGGCCTTTTTATTGGCCGGTTTTGTTGCATTGGCCATGGCAGGAATAAGCTGGACACTT GAAACCAGTTCAAACTACTGGTTTTGGCATAGGTATTGCAATTTTACTCATACCCTCTCCTCTATTTCTTTGTTTCTGTG TATTCTCTGACTCATGTTTGCTCTTTTAAAATGGTTACAGCTTTTGGCATGTTACAATATACACATCTTCTTTCTTCTTC CTTTGTTCAAAAGTAAATATTGTCGATGATGCTGAGAATCAGCTACCGGCAAATGAAAATTATGAACTTACTCGTCAGGA TTCATTTCCAAGAGATAGTTAGAAAAGCATATATGGAATTGGAAGGGTGCAAAAAGGAATGTGAGGTAGATTTGTTTTGC ATTTTAATTTTGCTTTAAGGTTATACAAGAATGTTAGGCTGTCATGTAGTATATATGGTTGCTGACCAGATATGTAAACA ATGAGTAAAGAAGTCTCTTGTAAATTCTTTGCTTCACAAGGCTTGCTTCTTTCTTTTAGTCATATATACATTTTTTTATA TACATATTTACTTATATATGAACAATTAACATTGGGTATCAAACTCTTATAGTGAATGCAAAACTAATCG
CDS sequence (LotjaGi3g1v0385400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTACCCGAGGCCCAGCATACTCCTTTAGTGCCAATATTAGCGTGGCAGCATGCACAAATTCAATGATGAGTGGGAA GTTCTGTAACAGTACAGTCTATCCACTTTCGTGCACAACATCTGATGTCTATGATACATTGAAGGCTACAATAAAGAAGC CAATCATGGAAAATGCAACGACCTGCAAAAGTAAAATTGAAACTTTTTGTGTTCAGGAAGGTCTACCAAACTTTTACTCC TTGGATATATCAAATGTGGTAGAAGAAGTGACCATTATGGTAGCAAATGTCAGATTAAATATTACATCTTCAAGTAATGC TTCTGGTGCAAGTGATGTTAATTTATTGGGTTTTGCGCGCCATGGTGCAATACCTGCAGATTCTGTGTTTGATTATTCCA GTAATTTAAATAAAGCCCCGATGGTTATTCGCTCTCCACGGATTGGTCGTTTGTACATTAGTATATTACCAGTTAATCTT ACAAAAAAATTTGGAGGGACGCAGGATGGCAATGTAAAAGTTTGCTATTCGATGGAATCACAAGTGCTACAGTGCCCACT TGGGAAAGCTGGACCAAATTGCACAATGGGTAGCTACAATCTTCAGACAGTTCTAAGGAAAGGTCCAACCCCCTTTGAAT CATATTATTTACCTGTCGGTGAAGGAGCATCTTCTGCCAACTTTCCTCTTGAGCCACTTTCTAACAGCTCATCAAACAGA GGAGAAACTAATGACATTTGGACTTACTTCACTTTCGACATTCCTCGTGGGGCAGCTGGACGAAATATTCATGTACGGCT ATCCTCAGATGTGAAGATCAGTTATGAAGTTTATGCTAGATTTGGCGGATTGCCTTCTCTTGATAGCTGGGACTACTATT ATGCTAACGAGACAAAGAAGAGTGATCAATCCATGTTCTTCATGGAATACGATTCAAGTGATGACAATATTGATTTTTAC ATTATTTATGCTAGAGAAGGAACTTGGGGTTTTGGTCTAAGACATCTTAATACTAGCAGTGATTCTTTGAAACAGCAAAC TATCATGTCTTTGGCACTTGAAGGGTGCCCAAAACATTGCTCCTTTCATGGGGACTGTAAATATTCTTTTGATGCGAGTG GATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTGGAAATTGTATCACATAAA GGGCATGTCCTGCAATCAATTTTTCTCATCGCATCAAATGCTGCAGCCATATTTCCTGCCTATTGGGCCCTTCGCCAGAA GGCCCTTGCAGAATGGATTTTGTTCACGTCAAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTAGGCACCTGGT GTGCATTAAACTACAATGTTCTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTTGTTAGCACTTTTGTGTACCTA GCTACTATTGGTGAAGTCTATAAGAGGGCAATCCACACTGCTGTTGCTATACTTACTGCTCTTATGGCTGCAACTAAGGC AACCAGGTCTTCAAATATTGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATTGGATGGTTGGCAGAAATTTCAA CAAAGTATAGGTCCCTTTCCTTTTCACTTGGATTCTCACCAAATTTCTTTCTAAGTTTGCAAACTATAAAGCAATGGCTG TATAATCTTGTAAAGACAATCTTGAGACGGTTCCGCTGGGCCTTTTTATTGGCCGGTTTTGTTGCATTGGCCATGGCAGG AATAAGCTGGACACTTGAAACCAGTTCAAACTACTGGTTTTGGCATAGCTTTTGGCATGTTACAATATACACATCTTCTT TCTTCTTCCTTTGTTCAAAAGTAAATATTGTCGATGATGCTGAGAATCAGCTACCGGCAAATGAAAATTATGAACTTACT CGTCAGGATTCATTTCCAAGAGATAGTTAG
Protein sequence (LotjaGi3g1v0385400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MITRGPAYSFSANISVAACTNSMMSGKFCNSTVYPLSCTTSDVYDTLKATIKKPIMENATTCKSKIETFCVQEGLPNFYS LDISNVVEEVTIMVANVRLNITSSSNASGASDVNLLGFARHGAIPADSVFDYSSNLNKAPMVIRSPRIGRLYISILPVNL TKKFGGTQDGNVKVCYSMESQVLQCPLGKAGPNCTMGSYNLQTVLRKGPTPFESYYLPVGEGASSANFPLEPLSNSSSNR GETNDIWTYFTFDIPRGAAGRNIHVRLSSDVKISYEVYARFGGLPSLDSWDYYYANETKKSDQSMFFMEYDSSDDNIDFY IIYAREGTWGFGLRHLNTSSDSLKQQTIMSLALEGCPKHCSFHGDCKYSFDASGLTSYSFCSCDRNHGGFDCSVEIVSHK GHVLQSIFLIASNAAAIFPAYWALRQKALAEWILFTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVVSTFVYL ATIGEVYKRAIHTAVAILTALMAATKATRSSNIVLVIVIGALGLLIGWLAEISTKYRSLSFSLGFSPNFFLSLQTIKQWL YNLVKTILRRFRWAFLLAGFVALAMAGISWTLETSSNYWFWHSFWHVTIYTSSFFFLCSKVNIVDDAENQLPANENYELT RQDSFPRDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 648 | 648 | 1.0E-240 | ||
| Phobius | 1 | 402 | 402 | - | – | |
| PANTHER | 1 | 648 | 648 | 1.0E-240 | – | |
| ProSiteProfiles | 1 | 19 | 19 | 5.0 | – | |
| ProSitePatterns | 381 | 392 | 12 | - | ||
| Pfam | 402 | 607 | 206 | 1.1E-55 | ||
| Phobius | 403 | 424 | 22 | - | – | |
| Phobius | 425 | 465 | 41 | - | – | |
| TMHMM | 465 | 487 | 23 | - | – | |
| Phobius | 466 | 483 | 18 | - | – | |
| Phobius | 484 | 488 | 5 | - | – | |
| Phobius | 489 | 505 | 17 | - | – | |
| Phobius | 506 | 511 | 6 | - | – | |
| TMHMM | 507 | 529 | 23 | - | – | |
| Phobius | 512 | 530 | 19 | - | – | |
| Phobius | 531 | 535 | 5 | - | – | |
| Phobius | 536 | 553 | 18 | - | – | |
| TMHMM | 539 | 561 | 23 | - | – | |
| Phobius | 554 | 572 | 19 | - | – | |
| TMHMM | 573 | 592 | 20 | - | – | |
| Phobius | 573 | 592 | 20 | - | – | |
| Phobius | 593 | 597 | 5 | - | – | |
| Phobius | 598 | 618 | 21 | - | – | |
| TMHMM | 602 | 624 | 23 | - | – | |
| Phobius | 619 | 649 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0385400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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