Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0386700 |
| Transcript ID | LotjaGi3g1v0386700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G01540.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q3EDL4|Y1154_ARATH Probable serine/threonine-protein kinase At1g01540; TrEMBL-Plants: tr|A0A151UCT7|A0A151UCT7_CAJCA Putative serine/threonine-protein kinase At1g01540; Found in the gene: LotjaGi3g1v0386700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78236235..78239681) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAACTTAATCTTCCGGAGTATTTTAGTGAGGGTGACAATTCTAATGGATGGTGTGTGAAATCTAATTCCCACCAAAC ACGGTTCTCTAAAAACAGAATCAAAACAAACAAAACCCCTCTCATAAACAACAACAACAACAACAAACCGAAGCTTCCTT GCTCCGTTTTTCGTAGCCTCTCTCTCTCTCTCTCAAGAACCTTTCATTTATTACTTCACTATCTCACTCAACACACACTC TCTCCTCCATTTCGATTCAAAAACCTCCATCTTCAACTCTTCACTCTTTCTTTCCGATCTCACCCTCCCAATGCCACCAT CCATTTCCTAACCATGTCAGTCTACGACGCCGCATTCGTCGACACAGAGCTTTCCAAACGCACCTCAATCTTCGGCCTCC ACCTCTGGGTCGTAATCGGAATCCTCGTCGGCTCTCTCATCGTCATCTCCCTCTTCCTCCTCTCTCTCTGCCTCACCCGC CGCCGCCGCCGCACAACCAAAACCTCCTCCGCCGCCGCTGCCATTCCCTCCGCCACCCCCGTCGTCTCCAAGGAAATCCA GGAGATCGTCCACATCCCCACTTTGCCAGAGATCCACATCGACCCCATCAAACCTCACCATGCCTCCACCAGCGGCGAGA GCAAGGGGACTGCCAGCGTCTGTGAAACGGCATCGTCGTTTGGGAGTGGGAGTGTGGGCCCTGAAGTGTCGCATCTTGGG TGGGGGAGGTGGTATACGCTCAGGGAGCTGGAGGCTGCCACCAATGGACTGTGTGAGGAGAATGTGATTGGAGAAGGTGG ATATGGAATCGTTTACCGTGGATTGCTCCCTGATGGTGCCAAGGTTGCTGTCAAGAATCTTCTGAATAACAAGTATGTTA CTATTCTTCATTTTCACTTGCATCTTTAATTTTCACCATAACCATTCAATTCATTGTTTTTGTTCATTGCTCTGTACACT TAATTAAGATAATAGTAATGATGTTGTTGAGAAGATTAAAGGGTAAAAGGGAAAGTTTATAAAATAATTTCAGGATTGGA TTTCTTAGTGTTTCAGTTTTCTTCTGTCATGGAAGAATATATTATCATGTTATTTGGCTCTACTTGGTTTCTGAATTTGT GCAAGAATATTAGGTGATAGTCAAAAGTGTAAACGTAAACCGGCTATTTAGGTATTGGTTTCTTACTGTTGAAGTTTCAA CTTTATAGAAACTGGGTTTTCTTAATTTCTTGCCAGAGGTTGAAAAGTTCATGATCACTATGTATAAAATATGATATTTT GAATCAGAGGGAGGATTGAGGTAGTCAAAAGTGTTTGCTTGAGCGACGATGATGTTTATCCTGCGCAGTAATTGGCTCTT TATTGTATGCTAATGTTTTCTTGTGTTTTACTCTTGCTACTGTTTTCTACTTTTCAATCCTTTTTTTCGGTTGGATGTTA TCCTTGTCTTCTTTTTTTTTTTCAATCCCTTGTTTCCATACTACTGAATTTATAATTTGTCACTTGTCATGAGTTTTGTG ATGCCATTCATGGTTGATGGTTGGTTTTTTTCACTTTCTTTTTAAATTCATCACTAACTGTTGCTACAACTTAATGGAGG TTCTGTGGTCTTGATCTTGTTTTTTGGTTTCTCTTAGAAGTGAGAACTTAATGTTTAACTGATCATCCTCAGGGGCCAGG CCGAGAGAGAATTTAAAGTAGAGGTAGAAGTAATTGGCCGTGTGCGGCACAAGAATCTTGTTAGGCTGCTCGGATACTGT GTTGAGGGGGCATACAGGTATTTTTATTTTTTATTTCAATTTATTTAATTTTTAACATTGAATCTGAAATGTTATGGATG TAAATTACAGGATGCTTGTGTATGAATATGTTGATAATGGCAATCTGGAGCAATGGCTGCATGGGGATGTTGGATCTGTA AGCCCTATGACATGGGATATCCGGATGAACATTATATTGGGCACAGCAAAAGGGTACCATATTCATGATCTAATCTGCAT TCATCAGCATCCATGTTGACGCTTGAAAGGTTTTGATCACAGTGATTTTCGTGTATCTTTTCAGATTGGCTTATCTTCAC GAGGGTCTTGAGCCAAAAGTTGTTCACCGAGATGTGAAATCAAGTAACATACTCCTTGATCGCCAATGGAACTCCAAGGT TTCTGATTTTGGGCTTGCCAAGCTTTTACATTCTGATCACAGCTATGTCACCACTCGAGTGATGGGGACATTTGGGTTTG TATCATTTAGCTATGCATTCACCCATCTTTCTTACCAATTACAATTAGTTTCAGTTCCTTTATGAGTGCAATGCACTAGT AGTTTTTATTACTCTCAAATTTAAGGTCCATAGAGGTGATTCTCTCCCTTTCTCTTTCGGCAGTTATGTTGCACCAGAGT ATGCCTGCACTGGAATGCTAACTGAGAAGAGTGACATTTATAGCTTTGGGGTACTTATCTTGGAAATAATCACTGGGAGA AGTCCTGTTGATTATAGTAGACCGCAAGGAGAGGTTAGAGACCATCGCCAACAACATTTACACTTATCGATGCAGTACTC TCTCTCTCTCTCTTTCCCCCTTAACTGTGAAAGCTTAAATTATTGCAGGTTAATTTAATTGAGTGGTTGAAAACTATGGT TGGTAATCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTTCCTGAGAAACCATCTTCAAAGGCTCTTAAACGTGCCCTGT TGGTTGCTCTTCGATGTGTTGACCCTGACGCGTCAAAGAGGCCTAAAATAGGACATGTTATCCACATGCTTGAAGCTGAC GACCTCTTATTCCGTGATGTATGTTTCATTTTCCCATCTCAACTTTACATTCAAAATTGTTAATACTCTGTTGTTCATCA ATTTTTACCCTGCTGTCTGCACTCTGTAGGAACGAAGGATTGGGGGAGAATCTTCTCATTCCCATCGTGATTATCGACGT GAGCGTAGGGATTCAAGTTTAGATAGAAATCGGGTAGCTGAAGATATTACTGATCAAAGTGAAGATGACAGTAGTAGACA TAACCTTCTGCCCACTAGGTTGAGAAGATAGTAGTCTGTTAGTTGAAAAGCAATGCGTTTGTTATTTTTGGTTACTAGTT TGCCAATATTTATTTCTACCTCAATGAGGAAACAAGAAATCATTTTTTCCTTCCTCTTATTTGCATAAATTTCCCCATTG CCACCTACCTACCTTAAATTGGAATTCATTTGTAATCTTGTATACTCTGATTCATTATTATAAAAATCAAAATTATTTCT CTTTCTATTTGTAAGACAATGTAGGATAAGCTTTGCATTAAAATTAGTACTTTTCTTGGTGTTCAAAATTTATTATCAAG TTCCTATCTTGGTGTTCAAAATTTATTATCAACTCCCACTGTCTGCATCATTTTGTTTTTAGCATTGCATTCTGGACTCT GGTCCAT
CDS sequence (LotjaGi3g1v0386700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGTCTACGACGCCGCATTCGTCGACACAGAGCTTTCCAAACGCACCTCAATCTTCGGCCTCCACCTCTGGGTCGT AATCGGAATCCTCGTCGGCTCTCTCATCGTCATCTCCCTCTTCCTCCTCTCTCTCTGCCTCACCCGCCGCCGCCGCCGCA CAACCAAAACCTCCTCCGCCGCCGCTGCCATTCCCTCCGCCACCCCCGTCGTCTCCAAGGAAATCCAGGAGATCGTCCAC ATCCCCACTTTGCCAGAGATCCACATCGACCCCATCAAACCTCACCATGCCTCCACCAGCGGCGAGAGCAAGGGGACTGC CAGCGTCTGTGAAACGGCATCGTCGTTTGGGAGTGGGAGTGTGGGCCCTGAAGTGTCGCATCTTGGGTGGGGGAGGTGGT ATACGCTCAGGGAGCTGGAGGCTGCCACCAATGGACTGTGTGAGGAGAATGTGATTGGAGAAGGTGGATATGGAATCGTT TACCGTGGATTGCTCCCTGATGGTGCCAAGGTTGCTGTCAAGAATCTTCTGAATAACAAGGGCCAGGCCGAGAGAGAATT TAAAGTAGAGGTAGAAGTAATTGGCCGTGTGCGGCACAAGAATCTTGTTAGGCTGCTCGGATACTGTGTTGAGGGGGCAT ACAGGATGCTTGTGTATGAATATGTTGATAATGGCAATCTGGAGCAATGGCTGCATGGGGATGTTGGATCTGTAAGCCCT ATGACATGGGATATCCGGATGAACATTATATTGGGCACAGCAAAAGGATTGGCTTATCTTCACGAGGGTCTTGAGCCAAA AGTTGTTCACCGAGATGTGAAATCAAGTAACATACTCCTTGATCGCCAATGGAACTCCAAGGTTTCTGATTTTGGGCTTG CCAAGCTTTTACATTCTGATCACAGCTATGTCACCACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTATGCC TGCACTGGAATGCTAACTGAGAAGAGTGACATTTATAGCTTTGGGGTACTTATCTTGGAAATAATCACTGGGAGAAGTCC TGTTGATTATAGTAGACCGCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAACTATGGTTGGTAATCGAAAATCCGAGG AAGTAGTTGATCCTAAGCTTCCTGAGAAACCATCTTCAAAGGCTCTTAAACGTGCCCTGTTGGTTGCTCTTCGATGTGTT GACCCTGACGCGTCAAAGAGGCCTAAAATAGGACATGTTATCCACATGCTTGAAGCTGACGACCTCTTATTCCGTGATGA ACGAAGGATTGGGGGAGAATCTTCTCATTCCCATCGTGATTATCGACGTGAGCGTAGGGATTCAAGTTTAGATAGAAATC GGGTAGCTGAAGATATTACTGATCAAAGTGAAGATGACAGTAGTAGACATAACCTTCTGCCCACTAGGTTGAGAAGATAG
Protein sequence (LotjaGi3g1v0386700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVYDAAFVDTELSKRTSIFGLHLWVVIGILVGSLIVISLFLLSLCLTRRRRRTTKTSSAAAAIPSATPVVSKEIQEIVH IPTLPEIHIDPIKPHHASTSGESKGTASVCETASSFGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIV YRGLLPDGAKVAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGSVSP MTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLHSDHSYVTTRVMGTFGYVAPEYA CTGMLTEKSDIYSFGVLILEIITGRSPVDYSRPQGEVNLIEWLKTMVGNRKSEEVVDPKLPEKPSSKALKRALLVALRCV DPDASKRPKIGHVIHMLEADDLLFRDERRIGGESSHSHRDYRRERRDSSLDRNRVAEDITDQSEDDSSRHNLLPTRLRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 20 | 47 | 28 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 48 | 479 | 432 | - | – | |
| PANTHER | 90 | 440 | 351 | 8.3E-185 | – | |
| PANTHER | 90 | 440 | 351 | 8.3E-185 | – | |
| SUPERFAMILY | 124 | 418 | 295 | 8.9E-82 | ||
| Gene3D | 126 | 221 | 96 | 5.6E-34 | – | |
| ProSiteProfiles | 146 | 423 | 278 | 38.52 | ||
| SMART | 146 | 424 | 279 | 4.4E-37 | ||
| Pfam | 149 | 415 | 267 | 8.9E-48 | ||
| ProSitePatterns | 152 | 174 | 23 | - | ||
| CDD | 152 | 418 | 267 | 1.17973E-102 | – | |
| Gene3D | 222 | 428 | 207 | 2.9E-62 | – | |
| ProSitePatterns | 268 | 280 | 13 | - | ||
| MobiDBLite | 432 | 473 | 42 | - | – | |
| MobiDBLite | 432 | 479 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0386700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…