Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0413600 |
| Transcript ID | LotjaGi3g1v0413600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81805832..81810912) extracted from Lotus japonicus Gifu genome v1.2.
AAAAACACAGTGAATGAAATCATGGGTTCTTCATTGCTAGAGAGATCCTTGTTTACTTCTTCATCTTCTCCCTTACGCAA CAGTTTTCACCAGAAGCAGAGCGGGTTCTTGATCACCCCTGCGCAGCTGGTTCCTCTTGATAACAGAAGAGTGGTGAGAT TCAGGAAGATTTCCAAGTTCCCTGTTGCTGCTATCAGTGAGGATTTGGTGAAGGGGTCTTCTTCTTCTTCATCTTCCTCA TCCTCATCCTCTGCTCCTCTTTCATCATTTTCTTCACCTTCTCCTCTGCCTCCTCCTGTTCCTGAAGACAAACCGGTCAA ATTCAAGGTCAGAGCTGTGGTCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAATCAATCGCCAAACAGCTTGATG CTTTAACTGATAGGATTGGCAGGAACGTTGTTCTTGAGCTTTTCAGCACTGAAATTGATCCAAGTAAGATTTCCCTAATT TCTAAACATGATCACTTTCAATAATCCTTAATTTTAGGTTTCTAATTGGTTTTCGAGGCGGAGGTAGTTTATGTTGCAAT GGTAAAAAGTGGTCTGTTACATTGGTAAAAAATGACTGTTTGAACCTTAAATTCAGAGCTGGATTCCTAGGAGTCATATA TGCTTGACATTAATTACACCTGGGGTTGGGGTTAGAATTGCGATAGTAATTTAATACACAAATAATTTTGCATTTTTTTT TTCTAAGCTAATTTTTCTGATGTTAGTTGGAATAAATTTGAATTTTCTAGTATAATTTCCCTAATGGGTACTTATTTTTT TTGGCAATTCAGAAACCAAAGCTGCAAAGAAGAGTAAGGAAGCAGTGTTGAAGGATTGGGCAAAGAAATCCAACATCAAA GCAGAGAGAGTAAATTACACAGCTGAATTCATTGTGGACTCCAATTTTGGTGAACCAGGAGCAATTACTGTGATAAACAA TCACCAGAAAGAGTTCTTTTTGGAAAATATTACTATTGAAGGATTTGCAAGTGGTGCAGTCCATTTCCCGTGCAACTCGT GGGTTCAAGCAAGAAAAGATCATCCTGGAAAGAGAATTTTCTTTTCTAACAAGGTACTAATTAATCTATTAATCTATCTT TGAAGTTTCAACACTTGTTTATTATAAGTAATAATCTGTTTATTATAAGTAATAATCTGTTTATTTCGTTAAATTAAATT TTCCTGTCATGATGATTGGGCCCATGAAATAGACAGTAGCCAATATGGCAATAATTTAATGTTTTTTTTTTCTGACTGTT TAATTGTTCCATTTTGAACGTGGAAATACGGTCAAAGCAATATTTATTCTTATTTTGAAGAATCTTGAAAAGGACAATAA TATCTAAAAGTTCTTTTTACCCAAAGTCCATTTATTTTTTCAGTGCCAACTACTAGTAACATGTGATTTTCTTTTTTTTG ATAAAAAGTAACATGTGATTTTTATATTTATATCATTATATGTTTTAAATCATTTACCTTAATAAACAGACAAAAGCTGA ACCTTAAAAAAGGAATGGATCATGGAACCATATATTTTTGTCTATTCATGGGCCAAACCAAGCACCTATGAAATAACATA TCAACTACAGTTCAATTTGATGCCCTTCCACTGAGGGTGAATGTGATGCTAAAATCTAATTACTATGATAAAAAAAATCT TCTAAAACTGTAGTAGAAGTTAAAAAGGATGAAAGGGAGTAACAAATTAATTATGATTATAATCTCCTTTCACTTTGGTA TAATAAAAGTTTATAATTTGTTTATTTTCTTGTTGAATTATTTGAACAGCCTTATTTACCTGGAGATACCCCTGCTGGGT TAAGACTATTGAGGGAGAAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGCTAGAAAATTATCTGACAGAATATAT GACTATGAGATATACAATGACTTGGGAAATCCAGATAAAGGAGTTGACCTTGCTAGACCAGTTCTTGGAGGATCTGATAT GTATCCATACCCAAGACGGTGTCGCACTGGCCGTGAACCAAGTGATACAGGTAATGATAGTAAATGGAAGGAAATATTTC ACTACAAATGTTGCACAAAAACATGTTATCATCTTTAAGAGTTATGTTATTTACAACTTTCAATTGTGTGTAAAAAATTG GAAATCTGTATTGCAGACTGTTGTGCATTTTTTATTTATTTATAAGAGGGTATTCACTAGTTTGGTGAAAATTGAATTTA GGTGACCTTGATGTAATGCAGAATAACACTATGTTATGGATTGGATCAGTTTTTGTTCCTCATAATCAATTTTGAAATCA AGAAGCTTCCTAAGAATTGATAGCTTCAGAACTAATTGTGGAAAAATTTCCAAACATGTACTAAGCCAAATTTGATCGGG TGTTGCAGATATGTATTCAGAGAGTCGTGTGGAGAAGCCACAGCCTATGTATGTACCAAGAGATGAACGATTTGAGGAGT CTAAGCAGAACACCTTTGTTGTGAAGAGGCTTAAGGCAGTGCTCCATAGCTTAATTCCGAGCCTTAAGGCGAGCCTTTCT GTTAACAATCAAGACTTCAATGATTTCTCAGATGTTGATGGCCTTTACAGTAAAGGGTTGCTCATTAAGTTGGGGTTACA AGATGACCTTTTGAAGAAACTCCCACCAAAAGTTGTGACCAAGATCCAAGAATCCAGCCAGGGACTTCTTAAATATGATA CTCCCTTGATCATACAAAGTGAGTAGGATCTTATTATGTCAATTTCTTGCCTTTTCCTTCAATTAGAAAATTTGGCTACA CAATTTGACTTTTTTCTTTTACATAAACACAGTAAGATTTTGATTACGAGCTAATTTCAACAGATAGTAAGTTAAGCAAT TCTAGGGGAATCAATAAGAATGGGATTTCAATTGCAAAATGTTATTTGGCCTTTAGTGTTTGTCAGATGAATTTCACCAA AAGAAGTTATCCTTGTCAGTTGCCAGGTTGCATGATCTTATTCCTTTAATTATATATACCTTTATGAGTGTGTTAACTTT TAATTATTATATGGAGAACTTTTGGAATCCGCATCCAATTGCTATTTTAAATGTTTCACATGTGGGTTTAGTATTGTAAA TTGATATTTGAACTCAAGCTGATATCTTATATGATTTTCTTATTCAACTAATGATCTCACATGTCTAACTTGCAGAGGAC AGATTTGCCTGGCTGCGAGATGACGAATTTGCCCGCCAAGCCATAGCTGGAGTTAACCCTGTTACCATTGAGAAGCTTGA AGTATTTCCACCTGTTAGCAAGTTAGACCCTGAAGTGTATGGTCCACTAGAGTCTGCTCTTAAAGAAGAGCACATTTTGA GCCAACTTAATGGCATGACTGTTCAAGAGGTACCCATCAAAGCCTTCATAAATTTAATAACCATGTTATGTAATCAAGTA CCTTGTGTTCTTATAATACTTTACCTTCATTCACTAAATTTTTCTTTTTCTTTTTTGCAGGCAATAGATGAAAATAAGCT GTTCATTGTTGATTATCATGATGTCTACCTTCCATTTCTTGAAAGGATTAATGCCCTGGATGGTAGAAAATCATATGCTA CCCGAACCATCTATTACTTGACTCCTCTTGGCACTCTGAAGCCTGTGGCTATAGAACTTAGCTTGCCTCCATCTGGACCA AGTTCGCGATCAAAACGTGTTGTTACCCCTGCTGTAGATGCAACTACTAATTGGACTTGGATGCTTGCCAAGGCCCATGT CTGCTCCAATGATGCTGGGGTGCACCAACTCGTCAACCATTGGTAAGCAAAGATCAAAATCTTCATGTATCTGTCAGTGA TTTGAAGTATAATCTTGTTGGTTAACTTGATTGAATTTAATTTTCTTTGCTCAATTGTATATAGGTTACGCACACACGCC TGCACGGAACCATTTATATTGGCGGCTCATCGGCATTTGAGTGCTATGCATCCTATTTTCAAGTTATTGGATCCACACAT GAGGTACACATTGGAGATCAACGCCTTGGCTCGCCAGAGCTTGATCAATGCGGATGGTATCATTGAGTCTTGCTTCACTC CCGGTCGCTACTGCATGGAGGTTAGTTCTGCCGCTTACAAAAACTTGTGGCGCTTTGACATGGATAGCCTCCCTGCAGAT CTCATCCGCAGGTAAAATGTCCTAGAATCTTGGTAAATTTTACCAACTTGATTTTTATTGTAAAGAGACTTAACATTTTT CTTGGCGTGCAATTGGTGTTTGCTTTATTTGGTGTATCTAATAGCAAATAAATCTAACAAAGATTCTCTCTTTTCACATT GCAGGGGAATGGCAGTGCCTGACCCAACAGAACCACATGGTCTAAAGCTCACAATGAAAGACTACCCTTATGCAGAAGAT GGGATACTAATCTGGTCTGCAATAGAAAATTGGATTCGTACCTATGTGAACTATTACTACCCACATTCAAGCATGATAAG CAATGATAGGGAGCTACAAGCTTGGTACTCTGAGTCAGTGAATGTGGGACATGCTGATAAGAGGCATGAGAGCTGGTGGC CCACATTGAACAACAGTGAGAATCTTGTCTCTGTCCTCTCCATTTTGATCTGGAATGCATCTGCACAGCATGCTGCTCTT AACTTTGGACAGTATCCTTATGGTGGTTATGTGCCTAATCGTCCCCCGATGATGCGAAGATTAATTCCAGAAGAAGGTGA CCCTGAATATGCAAGTTTCCTAGCTGACCCTCAGAAGTATTTTCTGAATGCACTGCCTAGTGTGTTGCAGGCTTCAAAAT ACATGGCTATAATTGACACTCTCTCTACTCACTCACCTGATGAGGAGTACTTGGGAGAGCGGCAGCAGCCATCAGTTTGG TCCGGTGATGCTGATATCGTTGAGGCATTCTACGACTTCTCTGCACAGATCCAGCAGATAGAGAAGGTGATTGATAGTAG GAACTCCGACCGGAATCTAAGGAACCGTTGTGGTGCAGGGGTGTTGCCTTATGAGTTACTTGCACCTAGCTCTGGACCTG GTGTTACATGCAGAGGGGTTCCTAACAGTGTGTCCACATAA
CDS sequence (LotjaGi3g1v0413600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTTCATTGCTAGAGAGATCCTTGTTTACTTCTTCATCTTCTCCCTTACGCAACAGTTTTCACCAGAAGCAGAG CGGGTTCTTGATCACCCCTGCGCAGCTGGTTCCTCTTGATAACAGAAGAGTGGTGAGATTCAGGAAGATTTCCAAGTTCC CTGTTGCTGCTATCAGTGAGGATTTGGTGAAGGGGTCTTCTTCTTCTTCATCTTCCTCATCCTCATCCTCTGAAGACAAA CCGGTCAAATTCAAGGTCAGAGCTGTGGTCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAATCAATCGCCAAACA GCTTGATGCTTTAACTGATAGGATTGGCAGGAACGTTGTTCTTGAGCTTTTCAGCACTGAAATTGATCCAAAAACCAAAG CTGCAAAGAAGAGTAAGGAAGCAGTGTTGAAGGATTGGGCAAAGAAATCCAACATCAAAGCAGAGAGAGTAAATTACACA GCTGAATTCATTGTGGACTCCAATTTTGGTGAACCAGGAGCAATTACTGTGATAAACAATCACCAGAAAGAGTTCTTTTT GGAAAATATTACTATTGAAGGATTTGCAAGTGGTGCAGTCCATTTCCCGTGCAACTCGTGGGTTCAAGCAAGAAAAGATC ATCCTGGAAAGAGAATTTTCTTTTCTAACAAGCCTTATTTACCTGGAGATACCCCTGCTGGGTTAAGACTATTGAGGGAG AAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGCTAGAAAATTATCTGACAGAATATATGACTATGAGATATACAA TGACTTGGGAAATCCAGATAAAGGAGTTGACCTTGCTAGACCAGTTCTTGGAGGATCTGATATGTATCCATACCCAAGAC GGTGTCGCACTGGCCGTGAACCAAGTGATACAGATATGTATTCAGAGAGTCGTGTGGAGAAGCCACAGCCTATGTATGTA CCAAGAGATGAACGATTTGAGGAGTCTAAGCAGAACACCTTTGTTGTGAAGAGGCTTAAGGCAGTGCTCCATAGCTTAAT TCCGAGCCTTAAGGCGAGCCTTTCTGTTAACAATCAAGACTTCAATGATTTCTCAGATGTTGATGGCCTTTACAGTAAAG GGTTGCTCATTAAGTTGGGGTTACAAGATGACCTTTTGAAGAAACTCCCACCAAAAGTTGTGACCAAGATCCAAGAATCC AGCCAGGGACTTCTTAAATATGATACTCCCTTGATCATACAAAAGGACAGATTTGCCTGGCTGCGAGATGACGAATTTGC CCGCCAAGCCATAGCTGGAGTTAACCCTGTTACCATTGAGAAGCTTGAAGTATTTCCACCTGTTAGCAAGTTAGACCCTG AAGTGTATGGTCCACTAGAGTCTGCTCTTAAAGAAGAGCACATTTTGAGCCAACTTAATGGCATGACTGTTCAAGAGGCA ATAGATGAAAATAAGCTGTTCATTGTTGATTATCATGATGTCTACCTTCCATTTCTTGAAAGGATTAATGCCCTGGATGG TAGAAAATCATATGCTACCCGAACCATCTATTACTTGACTCCTCTTGGCACTCTGAAGCCTGTGGCTATAGAACTTAGCT TGCCTCCATCTGGACCAAGTTCGCGATCAAAACGTGTTGTTACCCCTGCTGTAGATGCAACTACTAATTGGACTTGGATG CTTGCCAAGGCCCATGTCTGCTCCAATGATGCTGGGGTGCACCAACTCGTCAACCATTGGTTACGCACACACGCCTGCAC GGAACCATTTATATTGGCGGCTCATCGGCATTTGAGTGCTATGCATCCTATTTTCAAGTTATTGGATCCACACATGAGGT ACACATTGGAGATCAACGCCTTGGCTCGCCAGAGCTTGATCAATGCGGATGGTATCATTGAGTCTTGCTTCACTCCCGGT CGCTACTGCATGGAGGTTAGTTCTGCCGCTTACAAAAACTTGTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTCAT CCGCAGGGGAATGGCAGTGCCTGACCCAACAGAACCACATGGTCTAAAGCTCACAATGAAAGACTACCCTTATGCAGAAG ATGGGATACTAATCTGGTCTGCAATAGAAAATTGGATTCGTACCTATGTGAACTATTACTACCCACATTCAAGCATGATA AGCAATGATAGGGAGCTACAAGCTTGGTACTCTGAGTCAGTGAATGTGGGACATGCTGATAAGAGGCATGAGAGCTGGTG GCCCACATTGAACAACAGTGAGAATCTTGTCTCTGTCCTCTCCATTTTGATCTGGAATGCATCTGCACAGCATGCTGCTC TTAACTTTGGACAGTATCCTTATGGTGGTTATGTGCCTAATCGTCCCCCGATGATGCGAAGATTAATTCCAGAAGAAGGT GACCCTGAATATGCAAGTTTCCTAGCTGACCCTCAGAAGTATTTTCTGAATGCACTGCCTAGTGTGTTGCAGGCTTCAAA ATACATGGCTATAATTGACACTCTCTCTACTCACTCACCTGATGAGGAGTACTTGGGAGAGCGGCAGCAGCCATCAGTTT GGTCCGGTGATGCTGATATCGTTGAGGCATTCTACGACTTCTCTGCACAGATCCAGCAGATAGAGAAGGTGATTGATAGT AGGAACTCCGACCGGAATCTAAGGAACCGTTGTGGTGCAGGGGTGTTGCCTTATGAGTTACTTGCACCTAGCTCTGGACC TGGTGTTACATGCAGAGGGGTTCCTAACAGTGTGTCCACATAA
Protein sequence (LotjaGi3g1v0413600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSSLLERSLFTSSSSPLRNSFHQKQSGFLITPAQLVPLDNRRVVRFRKISKFPVAAISEDLVKGSSSSSSSSSSSSEDK PVKFKVRAVVTVRNKIKEDFKESIAKQLDALTDRIGRNVVLELFSTEIDPKTKAAKKSKEAVLKDWAKKSNIKAERVNYT AEFIVDSNFGEPGAITVINNHQKEFFLENITIEGFASGAVHFPCNSWVQARKDHPGKRIFFSNKPYLPGDTPAGLRLLRE KELRNLRGDGKGARKLSDRIYDYEIYNDLGNPDKGVDLARPVLGGSDMYPYPRRCRTGREPSDTDMYSESRVEKPQPMYV PRDERFEESKQNTFVVKRLKAVLHSLIPSLKASLSVNNQDFNDFSDVDGLYSKGLLIKLGLQDDLLKKLPPKVVTKIQES SQGLLKYDTPLIIQKDRFAWLRDDEFARQAIAGVNPVTIEKLEVFPPVSKLDPEVYGPLESALKEEHILSQLNGMTVQEA IDENKLFIVDYHDVYLPFLERINALDGRKSYATRTIYYLTPLGTLKPVAIELSLPPSGPSSRSKRVVTPAVDATTNWTWM LAKAHVCSNDAGVHQLVNHWLRTHACTEPFILAAHRHLSAMHPIFKLLDPHMRYTLEINALARQSLINADGIIESCFTPG RYCMEVSSAAYKNLWRFDMDSLPADLIRRGMAVPDPTEPHGLKLTMKDYPYAEDGILIWSAIENWIRTYVNYYYPHSSMI SNDRELQAWYSESVNVGHADKRHESWWPTLNNSENLVSVLSILIWNASAQHAALNFGQYPYGGYVPNRPPMMRRLIPEEG DPEYASFLADPQKYFLNALPSVLQASKYMAIIDTLSTHSPDEEYLGERQQPSVWSGDADIVEAFYDFSAQIQQIEKVIDS RNSDRNLRNRCGAGVLPYELLAPSSGPGVTCRGVPNSVST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 919 | 888 | 0.0 | – | |
| PANTHER | 32 | 919 | 888 | 0.0 | ||
| Gene3D | 75 | 226 | 152 | 8.3E-44 | – | |
| CDD | 84 | 223 | 140 | 1.0504E-55 | ||
| SUPERFAMILY | 84 | 226 | 143 | 6.12E-47 | ||
| SMART | 84 | 223 | 140 | 1.1E-46 | ||
| ProSiteProfiles | 98 | 222 | 125 | 22.227 | ||
| Pfam | 136 | 221 | 86 | 6.7E-14 | ||
| PRINTS | 192 | 210 | 19 | 1.8E-66 | ||
| PRINTS | 218 | 239 | 22 | 1.8E-66 | ||
| ProSiteProfiles | 225 | 920 | 696 | 280.509 | ||
| Gene3D | 227 | 329 | 103 | 2.3E-40 | – | |
| SUPERFAMILY | 228 | 919 | 692 | 1.23E-260 | ||
| Pfam | 235 | 903 | 669 | 0.0 | ||
| PRINTS | 257 | 273 | 17 | 1.8E-66 | ||
| PRINTS | 290 | 309 | 20 | 1.8E-66 | ||
| MobiDBLite | 290 | 314 | 25 | - | – | |
| MobiDBLite | 293 | 314 | 22 | - | – | |
| Gene3D | 330 | 418 | 89 | 3.8E-13 | ||
| PRINTS | 358 | 379 | 22 | 1.8E-66 | ||
| PRINTS | 405 | 421 | 17 | 1.8E-66 | ||
| Gene3D | 419 | 551 | 133 | 6.6E-54 | – | |
| PRINTS | 444 | 463 | 20 | 1.8E-66 | ||
| PRINTS | 511 | 535 | 25 | 1.8E-66 | ||
| Gene3D | 552 | 919 | 368 | 1.7E-157 | – | |
| PRINTS | 556 | 573 | 18 | 1.4E-19 | ||
| ProSitePatterns | 574 | 588 | 15 | - | ||
| PRINTS | 574 | 591 | 18 | 1.4E-19 | ||
| PRINTS | 594 | 614 | 21 | 1.4E-19 | ||
| ProSitePatterns | 601 | 611 | 11 | - | ||
| PRINTS | 832 | 846 | 15 | 1.8E-66 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0413600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…