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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0420000 |
| Transcript ID | LotjaGi3g1v0420000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82781887..82787226) extracted from Lotus japonicus Gifu genome v1.2.
CAAATAAGTCTATAAATACATTAGGCTTCTTCTCAGAAGCCACAAGCCTCTCTTCCATCTGGCATAAGAGCAGTGTGAGA CTGTGAGTTGATCTTAGCATTTTGCAAAGATGTTAGGAGGATTAGGAATCTTTGACAAGAGTCAAAAGATTAAGGGCACT GTAGTGTTGATGCCCAAAAATGTTTTGGACTTCAACGCCTTAACATCCATCCCTAAAGGGGGTATTCCTGGCATTGCCGG CAATATCTTCGGACTAGCCACCGATGCTGCCGGCAAAGTAGTGGATTTTTCCACTGCCATCCTCAGCCGTAGCGTCGCCA TACAGTTGATCAGTGCTACCAAGACTGATGGTTTGTTTTTTCTCACACTTCTCTATAGTCTTCCAGTTCCACAACAGTCT TTTTGCTTAAAAAAACAAGTTCTGTTGAACCAAAATGTTTTTTAATTATGCTTTATCTCTCCACTTTTCTTTTTCAATCT TCATAGATCCATGTCTATTTTTTCTAACATCTCTCATTTCTATACACTTTCTTCTCTTATCTTGTTATTAGATCACTAAT CAATAATCATAACTCTAACTTTCCTTTATGTTAGTGTTTTCTCTCTCAGAATGAAGGTGGAGTTTGGGAGTCAATGAGTC TTTTCCTCTTCTTCTTTTTTTGATATCATGTGCCATATCATTTCATATTTTTTTCATCACGTTTAGTGTAAATGTGAGAG CAAAAACAAATAAACAATAAACTATAATGTAAAAAGAAAACAAGAAACTATAAAATTAAAAATATCCTTATCCACATAAT TAGGTAGAATAAGTATATAGGAGTAAAAAATTATTGAATAAAAAAAGAGTAAAAAATTATGGTGACAACAACACTACAAT TCAGGATGCTAGCTGGCGAGTAGGGCCAAATTGATTTGATCGGGATTTGAAAGGATTATTATTGTTCATGTCTATTTTTA AATAAATATATCTTGTATGTTCAAATTTTATCATAAACATAAAAAAAAATTATATGTGTAGGACGGTAGGTCTTATTAAA ATTATTTAATTTACTCAATAGTAAAGACGGATCACTTTCTTTTAGATGATTGTTGGTTCGACTTCCGCTATCAATACGAG AGTTGTGTTGAACAATATATAAGTATCTGCATAAGTGATTTATGGTCTCAGATACATGTTCAGGTTCATGGTGGTGACCG GAGTTAAACCTAGCTACTCAAACTTTTTCTTTGTTAATTTTTTTTTAAACCAAACCATTTTTAATTGTTTCAAAAAATCA TTTTAATGAAATAATTAATTATGTATATATGAAAATAGAAACTTAAAATGAAAAAATGAGACAAAATATCACCAAAAAAT ACAGTTTTGCTTGTGCGGATTGGATCATTGAAGAATGAAATTTTTATAAATCAGATCAGACAAAATACCAAATAGTAAGA ACTGGAATTTTAAATGAAAGCTGTCGTTGTAAGTTGTAACTTGTAATTAACGTAAAAAAAAAACTTTACAGTGATTGCTG CCCACTTAGAATAATAACTATAGGAATTAATGATGAAAAAAAACTTCACCCCCATTCACACCAACTTTTTTTTTTTTTTT CATATATTTTTCCTTTGCATATATGAGATTAATTCCTCTCCTTTTACTTTTTATTTTCTTTCCATTTTTTTTCCTTCCTC TTTCTTTCCTCCCTCTTACCAAACAAATCATTTTTGCAGCATCTGGAAAGGGAAAGGTTGGAAACCTAACCTACGTGGAT AAACACATTCCCTCGTTACCAACCTTGGGAGCTAGGCAAGAAGCATACAGCGTCTCCTTCGACTACGACGCCGATTTCGG AATCCCAGGAGCATTCTACTTCAAAAACTTCACCCAGGACGAGTTCTTCTTCGTCAGTCTCACCCTCGAAGACATTCCCA ATCACGGAACCATTCACTTCGTCTGCAACTCCTGGGTTTACAACGCCAAAAACTACAAGAAGGATCGCATTTTCTTCACC AACGATGTAATTCAACTCTATATACAGTCTTGCGAGTTTCATTTTAGTCTTTCGACAAAAAAATGACCGCAGTAAAAAAC AGTCAGTAATTATGAAATGACTGTTTTACTGGATTACATTTTTTCGCCGATAGACTAAAACTAAATGTACTTACAAAATT AGCGACTAATTTGACATCAATCCTGTATTTTTCAACTAATTTTTTTTTCTGTGTTGAAGGCTTATCTTCCAGGTTCAACA CCAAAAGCTCTGGTTAAGTACAGAGAAGAAGAGTTGGAGAATTTGAGAGGAGATGGATCAGGGGAACGCAAAGTGCATGA AAGGATCTATGATTATGATGTTTACAATGATTTGGGAAATCCAGATGGTGGTGACAATTTGGCTCGCCCAACCCTTGGAG GCTCTGCCAATTATCCCTACCCTCGCAGGGTTAGAACTGGTAGACAACCAACCAGAAAAGGTTAGATTTTTGAGTTTTAA TTTTCTGGGTTCAATTTTTATTTTGTAGGTAATAATGTATAATAAAAGCAATAATTATTTTTTTCATTGTAGTTTTGTTC AGAAATTTAATTATATTGCTATCATGTTACTGATTTGGCAATAGTTTTTTGTTTGTTTGTGTATTTCTGCTAATTTTACT GTTATTTCATTGTTTATAGATCCTACATGTGAGAAGCCTGCTGTGCAGTTGTATGTGCCAAGAGATGAAAATTTTGGTCA CTTGAAGTCATCAGATTTCCTTGGTTATGGAATAAAATCTGTTTCTCATGATCTGATACCTGCATTTAAGTCTTTGATCT TTGATTTAAGTATCACGAAAAGCGAGTTCGATAGCTTCGATGAGGTGCGTGATCTCTTTGAAGGTGGAATTTGGCTGCCT ACGGATTTGCTCCGCACAATTAGCCCCTTACCGGTTCTCAGTGCGGTATTGCCCAGTGAAGGTGAAAACGTGCTCACATT TCCGAAACCTCATGTTATCCAAGGTATGTTGTTCATCTTTAATTGAATCACCACACTATTACTCAAATAATTGTCTGTTA ATTTTGTTTGTTATTTTGGACTGCAGTTAGCAAGTCTGCATGGATGACTGATGAAGAATTTGGAAGAGAGATGATTGCTG GAGTAAATCCTAATGTGATTTGCCGTCTCCAAGTGAGTACAAATGATTTATTGTTAATGTTAAAACTGTAAATTTTGCTG TCGTTGATTAACTCTTTGATATGGCAGGAGTTCCCACCACGAAGCAACCTTGATGTCGCTATCTATGGCGATCGAACTAG TAGAATAACAAAAGAAAACTTGGAGATTAACCTTGGGGGGCTCACAGTAGAGGAGGTAATGATATAAATATGTTTTTCAA TTAAAAAATCAATAATATTTAGTGGTTGAAATCTATGAAACAAGGTGATTGAAATTGACTTGGTGGAACTGCAGGCACTT GGTGCTCAGAGATTGTTCATACTAGATTACCATGATGTGTTCCTGCCTTATGTGGAGAGGATAAACAAAATTAAAAAGGC TTATGCCACCAGGACAATCCTATTCTTGAAAGATGATGGGGCTTTAACACCACTTGCCATCGAGTTGAGTCTTCCTGATT CAGAAAGCAAAGTAATCTTGCCTGCAAATGAAGGGGTTGAGAGTACTATTTGGCTATTGGCTAAGGCTTATGTAATTGTA AATGACTCTTGCTATCATCAGCTCATGAGCCATTGGTATGAACTCCTCCAAAAGCCAGAACTACAAAAAGTTTGTTATAT GTATTTAGGACATGATCATTAATCATTTTTTTTCATGGGGCAACAGGTTAAATACTCATGCAGTGATGGAGCCATTTGTC ATAGCAACAAATAGACATCTCAGTGTCCTTCACCCTATTTATAAGCTTTTACATCCTCATTACCGTGACACAATAAATAT AAATGGACTTGCTCGAGAGTCCTTGATTAATGCAGGTGGCATTATAGAACAGTCGTTTTGCCCCGGACCTAATTCCATAG AGATGTCTTCAGCAGTTTACAAGGATTGGGTCTTTACTGACCAAGCATTACCAGCTGATCTTATTAAGAGGTAATCCTTA TTGAATATACATCAGTAGTAAAAAATTAGTTGTCTTTTGTTAATAACAAATTTTTTGCTTGATTCAGAGGAATGGCTGTT GAGGATCCCTCTGCCCCCCATGGTGTTCGCCTTGTTGTAGAGGACTACCCTTATGCTGTTGATGGACTAGAGATTTGGGA TGCTATTACGAAGTGGGTTCAAGAGTATGTCTCTTTATATTACCCAACAGATGATGCAGTTAAGAAAGACACTGAGCTAC AAACTTGGTGGAAAGAAGTTGTGCAAAGAGGTCATGCTGACTTGAGCGACAAGCCATGGTGGCCTAAGATGCAAACTCTT CAAGAGTTGATTAAATCCTGCTCTATTATCATATGGACTGCTTCGGCTCTTCACGCTGCTGTTAATTTTGGACAATATCC ATATGGAGGTTTAATCATTAACCGTCCAACAATCAGCAGAAGATTGATCCCAGAACCAGGAACTCCAGAGTATGATGAGA TGGTGAAAAGTCCTCAAAAGGCTTACTTAAGAACCATTACGCCAAAGTATGAGACTCTTATTGATCTTACTGTGATAGAG ATATTGTCTAGGCATGCTTCTGATGAGATCTACCTTGGGGAGAGGGAGAATCCAGAATGGACATCTGATACAAAGGCAAA ACAAGCCTTCCAAAAGTTTGGAAGCAAGCTGGCAGAGATTGAAGCAAAAATCAATGGGAGGAACAATGATTCAAGTTTGA AAAACCGATTTGGGCCAGCTCAACTGCCCTACACTCTGCTCCTTCGTTCCAGTAAGGAAGGGTTAACTTTCAGAGGAATT CCCAACAGCATCTCTATTTAGAAGACTATGTGGCTTGGCTTCCTTATCTATTGCACTTCCTTATAATAGGGACGATGCTT CTCTATGAATAAATATTTGTCTGTGTATGTTTGTACTCTGTGGAAGCTCCATTAATATGGTTTTCATATAATAAAGTGTG TTTCTGATATCAGTTTGCATATGTTTACATAGAATTAATTACATTTGCTATATGCTTTGCTGGAAATCCCAGCATATGGA TTTATAGACTTTAAATGTTCATGTTTTACAAATACAACAAACCTTGTGTTCCAATGACAGATGAATACGGCTTGCTCTGA AATCTCACTGAAACATAGTGGAAACTGCTCTCATGTACGGTGGAAATGACACTGATTGAAGTGGAAAATATTAATTTAAT TTTGATGAACTCATGATATATGGATTACACTATAAGAAAGACACACAATTAAAAGAAAAA
CDS sequence (LotjaGi3g1v0420000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAGGAGGATTAGGAATCTTTGACAAGAGTCAAAAGATTAAGGGCACTGTAGTGTTGATGCCCAAAAATGTTTTGGA CTTCAACGCCTTAACATCCATCCCTAAAGGGGGTATTCCTGGCATTGCCGGCAATATCTTCGGACTAGCCACCGATGCTG CCGGCAAAGTAGTGGATTTTTCCACTGCCATCCTCAGCCGTAGCGTCGCCATACAGTTGATCAGTGCTACCAAGACTGAT GCATCTGGAAAGGGAAAGGTTGGAAACCTAACCTACGTGGATAAACACATTCCCTCGTTACCAACCTTGGGAGCTAGGCA AGAAGCATACAGCGTCTCCTTCGACTACGACGCCGATTTCGGAATCCCAGGAGCATTCTACTTCAAAAACTTCACCCAGG ACGAGTTCTTCTTCGTCAGTCTCACCCTCGAAGACATTCCCAATCACGGAACCATTCACTTCGTCTGCAACTCCTGGGTT TACAACGCCAAAAACTACAAGAAGGATCGCATTTTCTTCACCAACGATGCTTATCTTCCAGGTTCAACACCAAAAGCTCT GGTTAAGTACAGAGAAGAAGAGTTGGAGAATTTGAGAGGAGATGGATCAGGGGAACGCAAAGTGCATGAAAGGATCTATG ATTATGATGTTTACAATGATTTGGGAAATCCAGATGGTGGTGACAATTTGGCTCGCCCAACCCTTGGAGGCTCTGCCAAT TATCCCTACCCTCGCAGGGTTAGAACTGGTAGACAACCAACCAGAAAAGATCCTACATGTGAGAAGCCTGCTGTGCAGTT GTATGTGCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATCAGATTTCCTTGGTTATGGAATAAAATCTGTTTCTCATG ATCTGATACCTGCATTTAAGTCTTTGATCTTTGATTTAAGTATCACGAAAAGCGAGTTCGATAGCTTCGATGAGGTGCGT GATCTCTTTGAAGGTGGAATTTGGCTGCCTACGGATTTGCTCCGCACAATTAGCCCCTTACCGGTTCTCAGTGCGGTATT GCCCAGTGAAGGTGAAAACGTGCTCACATTTCCGAAACCTCATGTTATCCAAGTTAGCAAGTCTGCATGGATGACTGATG AAGAATTTGGAAGAGAGATGATTGCTGGAGTAAATCCTAATGTGATTTGCCGTCTCCAAGAGTTCCCACCACGAAGCAAC CTTGATGTCGCTATCTATGGCGATCGAACTAGTAGAATAACAAAAGAAAACTTGGAGATTAACCTTGGGGGGCTCACAGT AGAGGAGGCACTTGGTGCTCAGAGATTGTTCATACTAGATTACCATGATGTGTTCCTGCCTTATGTGGAGAGGATAAACA AAATTAAAAAGGCTTATGCCACCAGGACAATCCTATTCTTGAAAGATGATGGGGCTTTAACACCACTTGCCATCGAGTTG AGTCTTCCTGATTCAGAAAGCAAAGTAATCTTGCCTGCAAATGAAGGGGTTGAGAGTACTATTTGGCTATTGGCTAAGGC TTATGTAATTGTAAATGACTCTTGCTATCATCAGCTCATGAGCCATTGGTTAAATACTCATGCAGTGATGGAGCCATTTG TCATAGCAACAAATAGACATCTCAGTGTCCTTCACCCTATTTATAAGCTTTTACATCCTCATTACCGTGACACAATAAAT ATAAATGGACTTGCTCGAGAGTCCTTGATTAATGCAGGTGGCATTATAGAACAGTCGTTTTGCCCCGGACCTAATTCCAT AGAGATGTCTTCAGCAGTTTACAAGGATTGGGTCTTTACTGACCAAGCATTACCAGCTGATCTTATTAAGAGAGGAATGG CTGTTGAGGATCCCTCTGCCCCCCATGGTGTTCGCCTTGTTGTAGAGGACTACCCTTATGCTGTTGATGGACTAGAGATT TGGGATGCTATTACGAAGTGGGTTCAAGAGTATGTCTCTTTATATTACCCAACAGATGATGCAGTTAAGAAAGACACTGA GCTACAAACTTGGTGGAAAGAAGTTGTGCAAAGAGGTCATGCTGACTTGAGCGACAAGCCATGGTGGCCTAAGATGCAAA CTCTTCAAGAGTTGATTAAATCCTGCTCTATTATCATATGGACTGCTTCGGCTCTTCACGCTGCTGTTAATTTTGGACAA TATCCATATGGAGGTTTAATCATTAACCGTCCAACAATCAGCAGAAGATTGATCCCAGAACCAGGAACTCCAGAGTATGA TGAGATGGTGAAAAGTCCTCAAAAGGCTTACTTAAGAACCATTACGCCAAAGTATGAGACTCTTATTGATCTTACTGTGA TAGAGATATTGTCTAGGCATGCTTCTGATGAGATCTACCTTGGGGAGAGGGAGAATCCAGAATGGACATCTGATACAAAG GCAAAACAAGCCTTCCAAAAGTTTGGAAGCAAGCTGGCAGAGATTGAAGCAAAAATCAATGGGAGGAACAATGATTCAAG TTTGAAAAACCGATTTGGGCCAGCTCAACTGCCCTACACTCTGCTCCTTCGTTCCAGTAAGGAAGGGTTAACTTTCAGAG GAATTCCCAACAGCATCTCTATTTAG
Protein sequence (LotjaGi3g1v0420000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGGLGIFDKSQKIKGTVVLMPKNVLDFNALTSIPKGGIPGIAGNIFGLATDAAGKVVDFSTAILSRSVAIQLISATKTD ASGKGKVGNLTYVDKHIPSLPTLGARQEAYSVSFDYDADFGIPGAFYFKNFTQDEFFFVSLTLEDIPNHGTIHFVCNSWV YNAKNYKKDRIFFTNDAYLPGSTPKALVKYREEELENLRGDGSGERKVHERIYDYDVYNDLGNPDGGDNLARPTLGGSAN YPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGIKSVSHDLIPAFKSLIFDLSITKSEFDSFDEVR DLFEGGIWLPTDLLRTISPLPVLSAVLPSEGENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSN LDVAIYGDRTSRITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINKIKKAYATRTILFLKDDGALTPLAIEL SLPDSESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAVMEPFVIATNRHLSVLHPIYKLLHPHYRDTIN INGLARESLINAGGIIEQSFCPGPNSIEMSSAVYKDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEI WDAITKWVQEYVSLYYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHAAVNFGQ YPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVIEILSRHASDEIYLGERENPEWTSDTK AKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGPAQLPYTLLLRSSKEGLTFRGIPNSISI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 861 | 857 | 0.0 | – | |
| Gene3D | 5 | 178 | 174 | 9.0E-66 | – | |
| PANTHER | 5 | 861 | 857 | 0.0 | ||
| SUPERFAMILY | 12 | 178 | 167 | 2.37E-52 | ||
| SMART | 12 | 175 | 164 | 1.3E-64 | ||
| CDD | 13 | 175 | 163 | 1.91191E-42 | ||
| ProSiteProfiles | 45 | 174 | 130 | 18.413 | ||
| Pfam | 77 | 173 | 97 | 1.5E-14 | ||
| PRINTS | 144 | 162 | 19 | 2.5E-90 | ||
| PRINTS | 170 | 191 | 22 | 2.5E-90 | ||
| ProSiteProfiles | 177 | 861 | 685 | 305.604 | ||
| Gene3D | 179 | 278 | 100 | 6.5E-42 | – | |
| SUPERFAMILY | 180 | 861 | 682 | 3.01E-271 | ||
| Pfam | 187 | 843 | 657 | 6.8E-302 | ||
| PRINTS | 209 | 225 | 17 | 2.5E-90 | ||
| MobiDBLite | 228 | 259 | 32 | - | – | |
| PRINTS | 242 | 261 | 20 | 2.5E-90 | ||
| Gene3D | 279 | 367 | 89 | 7.5E-30 | ||
| PRINTS | 310 | 331 | 22 | 2.5E-90 | ||
| PRINTS | 355 | 371 | 17 | 2.5E-90 | ||
| Gene3D | 368 | 494 | 127 | 9.7E-53 | – | |
| PRINTS | 394 | 413 | 20 | 2.5E-90 | ||
| PRINTS | 459 | 483 | 25 | 2.5E-90 | ||
| Gene3D | 495 | 860 | 366 | 3.0E-169 | – | |
| PRINTS | 499 | 516 | 18 | 1.6E-25 | ||
| PRINTS | 517 | 534 | 18 | 1.6E-25 | ||
| ProSitePatterns | 517 | 531 | 15 | - | ||
| PRINTS | 537 | 557 | 21 | 1.6E-25 | ||
| ProSitePatterns | 544 | 554 | 11 | - | ||
| PRINTS | 774 | 788 | 15 | 2.5E-90 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0420000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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