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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0425600 |
| Transcript ID | LotjaGi3g1v0425600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr|A0A151SHS2|A0A151SHS2_CAJCA Beta-galactosidase; Found in the gene: LotjaGi3g1v0425600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83515808..83521443) extracted from Lotus japonicus Gifu genome v1.2.
ATTGCTGTCATGGGCTTCAAGCTCAAAACATGGAATGTGCTAGTGTTGTTTGTGCTTGCATGTTCTCTGCTTGGTCATGC TGCAGCTTCTGTGTCCTATGACCATAAAGCAATCACCATCAATGGACAAAGAAGGATACTGCTTTCTGGGTCCATTCACT ACCCCAGAAGTACACCTGAGGTATTTCCCTGAAATGTGTTTAAGGGTTGTTTCCATTTTGCCTTTTTGTCAAATGGGCAC CTTAAAGTTTCTTCCTTTTTTTCTGAAAGAAATGTTTGGATGATTCTTAAAAGTTGGGGTTCATTTGTTGCTTTTTCAGA TGTGGCCAGATCTTATCCAAAAGGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGTCATGAA CCTTCACAGGGCAAGGTAATGAACAGTGCTTCTTGCTTGTTTTGCTTGTAGTGTTTGAACTTGAACTATGCATTTTTTGT CAGTTCACTAACCAGAAATAATCAATCAATGTTCTTCTGTTTCTTGATTACTGCAGTACTATTTTGAGGGTAACTATGAT TTGGTCAAGTTCATAAAGCTGGTGCAGCAAGCTGGCCTCTATGTTCACCTGAGAATTGGTCCTTATGTCTGTGCTGAGTG GAATTTTGGGTAATTAAAGACTTGAATTTTCTATTATAAATGTGAGAAGGGAACTTTGGAATTTCTTAACAGCTTTGGCT GATACATTTTTCAGTGGTTTCCCTGTGTGGCTCAAGTATGTTCCAGGTATCAGCTTCAGAACAGACAATGGGCCATTTAA GGTTAGATAACACCCATTCTAATATCTTTATGAATCAGTGAAAAATCTCATCTACTTCACAATTTTATCACTTTACCTTC TGATAAGTAATAACTCAATTTTTTTAACTTTGTTAATGTTGCTGTAATGAAGTATCAAATGCAAAGGTTTACCAACAAGA TTGTCAATATGATGAAGGCGGAAAGGTTATACGAGACTCAGGGTGGTCCAATTATTCTATCCCAGGTAGATGAAATTTGC AGCTACCCTTTTGCTTAACCCAAATTACTTGCTTAATACAGAGATATGTATTGAAGGTAAATTTTCTTTTGCTCAGATTG AAAATGAATATGGACCTATGGAGTACGAAATCGGCTCTCCTGGTAAAGCCTACTCTCAGTGGGCAGCAAGTATGGCTATA GGACTTGGTACTGGGGTTCCATGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCTATTGTAAGTTCAGTTGATATTTA CCTTTTCAATAGAAACATTTTTACCTTTTACAGGCATGTTCTCTAATCTGTCTAGCTTTTTGTCCTTGGTGAGGATACTA ATTAGTACTAATCACTATGTTGTGTCCATATTGCTAATGGAAGAAAATCAGGAAATGAATAATTAATCCTAGTTGTGCAT GGTTGCGATCTGTCTCTGTTCAGTCATTTTAATACTATTGATATTATAATGGCTTGCTATTGGGCATCATAACTTCGGTG AAATTGCCTTGACTGCATTTGTGAAAATTCAAAATCTGACATTTGTCAATCTTGTGCATGTTATATATACTAAAGAAATA TTGCATTTGCATGTAAAACCAGTTCCTTTGCGTTGACTTTCAGTAATGGTGATAATGATATTTCATCTTCTAATTCCAAC ATTAAACTTTGCAGATTAACACTTGCAACGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATG TGGACAGAAGCTTGGACTGGCTGGTATAACAAATTTATAGCTTAGATTCAGTGCCTTGTTACATCTTAGGTTTCCTAAGC AAAGAAAAAGTACAATCTAAGAGGGGTCGCCTGAATGTTCATTGCCTACATTCCTTTTTTCAAACTTATAGGTATACTGA GTTTGGAGGTCCTGTTCCTCATAGACCAGCTGAGGACTTGGCATTTTCAGTTGCAAGATTCATACAGAAAGGAGGATCAT TTGTCAATTATTACATGGTAACTTAAATATTGTTGATTTCAGTGAGGGATTTTGGCCTTTTTCATTCAACTAAGCCCTTA TGTTTTGTTCATTTCAGTATCATGGGGGAACAAATTTTGGTAGAACTGCTGGTGGACCCTTTATTGCCACGAGCTATGAT TATGATGCACCTCTTGATGAATACGGTATGCACAAAGGATTGTAATACATACTTATATGCCAGACCCCTGATTAAAAGGA AAGTTCTAATTGTATCCCATGTATGATCTTGAGTTATATTATTTCTTCCTCTGTGCAGGACTTCTCCAGCAACCTAAGTG GGGTCATTTGAAGGATTTACACAGAGCAATAAAGCTTTGCGAACCTGCTTTAGTTTCTGGAGATCCCACTGTAACTCGAC TTGGAAACTATGGAGAGGTATAACTTATTCAGTTATCTGGGAATTTATAATTCTTTGTCTTTAGAATAAACTTTTAACTT TCATCACTAATGTACAGGCCCATGTTTTTAAATCAAAGTCTGGAGCTTGTGCTGCATTCCTTGCAAATTACAACCCAAAA TCCTATGCAACAGTGGTGTTTGGGAATCAGCATTACAACTTACCTCCTTGGTCTATAAGCATTCTTCCTAACTGCAAGCA CACTGTTTATAACACAGCAAGGGTGAGGAAAATACTGAACACATTTTTATTTCCGATGACTAGAGCTGGCTTTGTTATAT CTTATGATGATGATTTTATTACTCTAAAAGCTTGACCAAGTATACACAATTGTGTTGATGCTTAATCTTATGCAGTTGTA ATTTTTCAGTTTTATGAAAATATATACAAAAGGGAAAGAATGATTGTTTTTCGGTGTCATATTTAACTTTAACTTTACAT GCTCTTGTTTGGCTAAAAGTTTCATTTACAATAAGAGAACAATATACTTTTCAATCATTGATGATTCCAAATTTTCATTA CAGGTTGGTTCCCAAAGCACACAGATGAAGATGACCCGTGTTCCTATTCATGGAGGACTCTCTTGGAGATCATTTAATGA AGAGACAACCACTACTGATGATAGTTCCTTCACTGTGACTGGCCTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTG ACTACTTGTGGTACTCCACAGAGTGAGTGATATATAACTCTTTGGTTTGCTTACTCCTTTTATTTTATTAATTGGATTTT TTCCTTGTTGAATACTGTTAGGACCCCATTGCAAGGTATGGGACTTGAGTCCCACATTGGAAGTATGGGATTCTAATGTG GGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCAATGGTA TCAGAGCCTTCCACCATGTCTCTGAGCTGCAAACGAGCGGCGCGGGTGGTGACGCCGGCATTGCAGTGTTCGCCCGGGAC TAGTCGTGGGGCTAGTGCACAGCCAGCCCGCGTGGGCGCCGGGGCTGCGGAGCGTGGTGGGATGTTAGGACCCCATTGCA AGGTATGGGACTTGAGTCCCACATTGGAAGTATGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAA CAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTCTTATCAAATACTTATCTTGTTCATCTTGTTGCAGTGTTGTGATCA ATCCCAATGAAGGATTTTTTAGGAATGGAAAGAATCCTTTTCTCACAGTATTATCTGCTGGGCATGCTTTGCATGTTTTT GTCAATGGTCAGCTATCTGGTGAGTAACAACTACTTGCCTAAGGAATATTGCAACTATTCCGTTTCTCTAATTGTGTTTT CACAGTTAGATCCAAGAGTTAGTGTGGGGACCTTATAAGTAGTTGATGTAAAATTTCCATAATTCAGTGAATTAGATAAT AGCATGTAATCAATATATCACAAGACATGATCTCGTACTCAATCCAATACGTGGTGTGAAACCCCATGGATCATTTTGTC ATTCTTCCTTTACCCCTTTCTGTTTTCTAAACAGTCTGAAACACACTTTTACTTTGGAAGCCAATAATTGTCAAATAGCT TCAGCTTCATCTTTGATACATTGAGCTTATTATTTTTCTTCTTTACGTCAGGCACTGCATATGGAAGCTTAGAATTCCCC AAACTAACCTTTAGTGAGGGTGTGAAGCTTAGAGCTGGTGTTAACAAAATCTCCCTTCTAAGTGTTGCAGTTGGTCTTCC GGTTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATGTTCATAAGTATGAAGTATGCCTGATGAACATGACTATATTA CTCACTTGCTGCATGCCATTGACATACAGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCAATT ACATTAAATGGTCTCAATGAGGGGAGAAGGGACTTAACATGGCAGAAGTGGTCATACAAGGTTCTTTGAACATTCACCAT GCTTTCTCTCTTTTTTATGCTTGCTTCAATTTGATTGAGATTTATTGAAGGTGAATGTTTGCTTCTTTTAGATTGGTCTT AAAGGTGAATCCTTGAGTCTTCATTCTCTCAGTGGGAGTTCCTCTGTTGAGTGGATTCAAGGGTATTTAGTTTCCCGAAG GCAGCCATTGACTTGGTACAAAGTGAGTATCATAGTGCCTCTAAAGCCCTATAAAAGTTACAAAGCATTTATGTTTTCAG TCTGCACTTGTTGAAAGTTTGGACTTAAAGTAACACCTTCACTATACATTATTGCAGACTACTTTTGATGCCCCGGCCGG AGTTGCACCGTTGGCTTTAGACATGGAAAGCATGGGCAAAGGTCAAGTGTGGATAAATGGACAGAGTCTCGGTCGCTACT GGCCAGCGTATAAAGCATCCGGTTCTTGTGATTACTGCAACTATGCAGGAACTTATCATGAGAAGAAATGTGGAAGTAAC TGCGGCGAGGCTTCTCAGCGTTGGTAAGAAATAATCTATCTTGTTCTGTAGTTTTTGTCAATGCTGGTGATAGACACTCG ACAAACTCAATTACCGCCTTGATCATTTCAGGTACCATGTTCCACATTCATGGCTGAAGCCAACTGGAAACTTATTGGTT GTGTTTGAGGAATTGGGTGGGGATCCCAATGGGATCTCTTTGGTTAGAAGGGATATAGATAGTGCCTGTGCTGATATTTA TGAGTGGCAGCCTAATCTTGTAAGTTATCAGATGCAAGCTTCTGGAAAAGTCAGCGCACCTGTGAGACCAAAAGCACATT TGTCATGTGGTCCAGGACAAAAAATCTCATCAATCAAATTCGCTAGCTTCGGCACTCCGGTAGGGTCTTGCGGCAACTAT CATGAAGGAAGCTGTCATGCTCACAAGTCATATGATGCCTTTGAAAGGGTATTACTTCTTGTTTAAAAGCTAGCCAAATA CAATTTTGACATCATAGAAACATTGATCTTATTTTTTCAGTTTTACTTAGTAGATTATTAAGTAATCACTTTATTATTAT TGCAGAGTTGTGTTGGACAAAACCAGTGTGCAGTGACAGTGGCCCCTGAAATTTTTGGAGGAGATCCATGTCCAAATGTC ATGAAGAAACTCTCAGTGGAGGCCGTATGCACTTGA
CDS sequence (LotjaGi3g1v0425600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTTCAAGCTCAAAACATGGAATGTGCTAGTGTTGTTTGTGCTTGCATGTTCTCTGCTTGGTCATGCTGCAGCTTC TGTGTCCTATGACCATAAAGCAATCACCATCAATGGACAAAGAAGGATACTGCTTTCTGGGTCCATTCACTACCCCAGAA GTACACCTGAGATGTGGCCAGATCTTATCCAAAAGGCTAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGG AATGGTCATGAACCTTCACAGGGCAAGTACTATTTTGAGGGTAACTATGATTTGGTCAAGTTCATAAAGCTGGTGCAGCA AGCTGGCCTCTATGTTCACCTGAGAATTGGTCCTTATGTCTGTGCTGAGTGGAATTTTGGTGGTTTCCCTGTGTGGCTCA AGTATGTTCCAGGTATCAGCTTCAGAACAGACAATGGGCCATTTAAGTATCAAATGCAAAGGTTTACCAACAAGATTGTC AATATGATGAAGGCGGAAAGGTTATACGAGACTCAGGGTGGTCCAATTATTCTATCCCAGATTGAAAATGAATATGGACC TATGGAGTACGAAATCGGCTCTCCTGGTAAAGCCTACTCTCAGTGGGCAGCAAGTATGGCTATAGGACTTGGTACTGGGG TTCCATGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGCAACGGCTTCTATTGTGATTATTTC TCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTATACTGAGTTTGGAGGTCCTGTTCC TCATAGACCAGCTGAGGACTTGGCATTTTCAGTTGCAAGATTCATACAGAAAGGAGGATCATTTGTCAATTATTACATGT ATCATGGGGGAACAAATTTTGGTAGAACTGCTGGTGGACCCTTTATTGCCACGAGCTATGATTATGATGCACCTCTTGAT GAATACGGACTTCTCCAGCAACCTAAGTGGGGTCATTTGAAGGATTTACACAGAGCAATAAAGCTTTGCGAACCTGCTTT AGTTTCTGGAGATCCCACTGTAACTCGACTTGGAAACTATGGAGAGGCCCATGTTTTTAAATCAAAGTCTGGAGCTTGTG CTGCATTCCTTGCAAATTACAACCCAAAATCCTATGCAACAGTGGTGTTTGGGAATCAGCATTACAACTTACCTCCTTGG TCTATAAGCATTCTTCCTAACTGCAAGCACACTGTTTATAACACAGCAAGGGTTGGTTCCCAAAGCACACAGATGAAGAT GACCCGTGTTCCTATTCATGGAGGACTCTCTTGGAGATCATTTAATGAAGAGACAACCACTACTGATGATAGTTCCTTCA CTGTGACTGGCCTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGATC AATCCCAATGAAGGATTTTTTAGGAATGGAAAGAATCCTTTTCTCACAGTATTATCTGCTGGGCATGCTTTGCATGTTTT TGTCAATGGTCAGCTATCTGGTGAGTAA
Protein sequence (LotjaGi3g1v0425600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFKLKTWNVLVLFVLACSLLGHAAASVSYDHKAITINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFW NGHEPSQGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKYQMQRFTNKIV NMMKAERLYETQGGPIILSQIENEYGPMEYEIGSPGKAYSQWAASMAIGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYF SPNKAYKPKMWTEAWTGWYTEFGGPVPHRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLD EYGLLQQPKWGHLKDLHRAIKLCEPALVSGDPTVTRLGNYGEAHVFKSKSGACAAFLANYNPKSYATVVFGNQHYNLPPW SISILPNCKHTVYNTARVGSQSTQMKMTRVPIHGGLSWRSFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVI NPNEGFFRNGKNPFLTVLSAGHALHVFVNGQLSGE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| ProSiteProfiles | 1 | 18 | 18 | 6.0 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 9 | 514 | 506 | 0.0 | ||
| PANTHER | 9 | 514 | 506 | 0.0 | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Gene3D | 25 | 343 | 319 | 3.0E-113 | – | |
| Phobius | 27 | 515 | 489 | - | – | |
| SUPERFAMILY | 28 | 344 | 317 | 2.15E-109 | ||
| Pfam | 35 | 339 | 305 | 5.5E-120 | ||
| PRINTS | 38 | 55 | 18 | 2.8E-71 | ||
| PRINTS | 59 | 77 | 19 | 2.8E-71 | ||
| PRINTS | 114 | 133 | 20 | 2.8E-71 | ||
| PRINTS | 171 | 186 | 16 | 2.8E-71 | ||
| ProSitePatterns | 173 | 185 | 13 | - | ||
| PRINTS | 250 | 265 | 16 | 2.8E-71 | ||
| PRINTS | 287 | 302 | 16 | 2.8E-71 | ||
| PRINTS | 307 | 323 | 17 | 2.8E-71 | ||
| Pfam | 347 | 418 | 72 | 2.2E-25 | ||
| SUPERFAMILY | 402 | 515 | 114 | 4.93E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0425600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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