Domain Predictions — View

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PTHR23421:SF123

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0025600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp\|Q9SCW1\|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr\|A2Q448\|A2Q448_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0025600	Domains G3DSA:2.60.120.260 G3DSA:2.60.120.740 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR031330 IPR041392 IPR043159 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF17834 PR00742 PS01182 PS50228 PS51257 PTHR23421 PTHR23421:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM TMhelix	30
LotjaGi3g1v0025600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp\|Q9SCW1\|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr\|A2Q448\|A2Q448_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0025600	Domains G3DSA:2.60.120.260 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR031330 IPR041392 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF17834 PR00742 PS01182 PS50228 PS51257 PTHR23421 PTHR23421:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM TMhelix	28
LotjaGi3g1v0025600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp\|Q9SCW1\|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr\|A2Q448\|A2Q448_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0025600	Domains G3DSA:2.60.120.260 G3DSA:2.60.120.740 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR031330 IPR041392 IPR043159 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF17834 PR00742 PS01182 PS50228 PS51257 PTHR23421 PTHR23421:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM TMhelix	30
LotjaGi3g1v0425600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp\|Q9SCW1\|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr\|A0A151SHS2\|A0A151SHS2_CAJCA Beta-galactosidase; Found in the gene: LotjaGi3g1v0425600	Domains G3DSA:2.60.120.260 G3DSA:2.60.120.740 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR031330 IPR041392 IPR043159 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF17834 PR00742 PS01182 PS50228 PS51257 PTHR23421 PTHR23421:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM TMhelix	30
LotjaGi3g1v0425600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT3G13750.1 beta galactosidase 1; Swiss-Prot: sp\|Q9SCW1\|BGAL1_ARATH Beta-galactosidase 1; TrEMBL-Plants: tr\|A0A151SHS2\|A0A151SHS2_CAJCA Beta-galactosidase; Found in the gene: LotjaGi3g1v0425600	Domains G3DSA:3.20.20.80 IPR001944 IPR008979 IPR017853 IPR019801 IPR031330 IPR041392 NON_CYTOPLASMIC_DOMAIN PF01301 PF17834 PR00742 PS01182 PS51257 PTHR23421 PTHR23421:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM TMhelix	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	20.00