Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0447700 |
| Transcript ID | LotjaGi3g1v0447700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5; TrEMBL-Plants: tr|C6T8E0|C6T8E0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0447700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86098960..86103067) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATTTTAACCTAATCCATATCAAATGTAACCGATATAGAATATTGAAAAAAATCATACATGCAAATAAGGTAAGAAA CATTCGAAGGGATGTATCTGTCCATGTTGTTCAGATTACTATAAGATACGGACAGAATCCTGTGTGAAACTGAAACCAGC AGCATCAGCACCAGGATTTCTGGAACCTTCCCCAGATATTCTCATTCCCAACAAAACAAGAAGCAGAGTATCTGCTGCAT CTGCAGCAGAAAGAGCCGTCAAACTGAGGAAGCGCAAGAGAGAAGCACAGCCCAAACAGGGGAGGCAGCAACAACCTGCC ATGGGTGTGGACTACTACAATGTCCTGCAGGTTGATAAGACTGTAAACGAGGATGATCTTAAGAAGGCTTACAGGAAGCT AGCCATGAAATGGCACCCTGATAAGAACCCCACTAACAAGAAAGAAGCTGAAGCCAAATTCAAACAGATTTCAGAAGCCT ATGATGTAAGTTTTCTGATAATAATTTCATGTTTTTGATGGATCTTAATTGAATTTCCAGTTTTTGTTTCTGGGTAATGC TGATTTTGTTTCTTCTGGTAGGTGTTGAGTAATTCTGAGAAGAGGGCTGTGTATGATCAGTATGGGGAAGAGGGGTTGAA GGGTCAGGTGCCACCTCCTGATGCTTCTGGTGGTGAAGGAACCGCTTTCTTTTTCGACTCCGGAGGTATGTCGTCGTCGT TTCAATTCAATAACCGGAATGCCGATGACATTTTTCAGGAGTTTTTTGGGTTCAACCCCTCTGGGGGCATGGGAAGGGGT GCTGGTGCTGGTGCTGGTGCTAGTGCTGGCGGCGGCGGTGGTGGCAGAGGAATGAGGCCGAGGGTCCCTAATGAGATGTT TCCTGACGACTTATTTGCATCTTTTCCGGAAGGAGGAGGACAAGGTGATGGTCGTCGCAAGGCTCCTCCCATTGAGAACA TGGTGCCCTGCACTATGGAGGAGATATACAAAGGGACCACAAAGAAGATGAAGATCTCTAGGGAAATTATTGAGGCCACT GGGTGAGTTGTTGTTTTTATCTGCTTTTATTTCCAATGCCATGTTAGTGACACTGTTAAAATTCTGTAACTGTTTCAAAT TCTGTTTGTTTGATACTTGATAGAAGAATTTTACTGATGAGATTCTCAGGTTTGAAACATGTGCGGATTAATTGATTAAG AAGCTGCTTAGACTGATGAAATAGCTGCTTTGCAATTTTGATTTGATTCATGACTGACTTTTGTTTGTATTTCATTCTGC AATGAGTTTACTTTGCATGACTAATTGGATCTCTTGTGTAGATGCCCTTTTTGTAAGTGTTGATTTGTATCATTTATTTA TGTTAGATTAATTCATCCATGTTGAAATGGTTATGCTGGACTGCTAGTAGACTCTGTAGGTCTGGTTGATGCAGTAATTG TTTTGTGTTACTATGTGACTTTTGCTAAACATGCTTTATACCTTGATACATACCTCAATTGACCCTTACTCCACTGTAGG CTATGTTTGTTAATTGGGTTTTGGAGGGGAGGGAAGGGAAGAGGTAAAATAGGGGGAAGGGTTTGGGGTATTTCTGAAAG CCCTCTAGTTGTTTTTATGAGTTCCTCCGAATTGGTGGGTTTTGTGGGATTTTGAACTTCCAAACAATGGGGGGCTTACC CTCCCTTCACCCTTTCTTTCTCTCCTCTCCCCTAAAAACTCCCAAACAAAGCCGTAGAGTACTGATGGTTTAGAATTTAA TCAATTTTTTCATCATCTGAGGTAAGATATGCCTTGATTTTTTCCAAATAGATCAGTTCTTTCTCTCCTCTCCCCTAAAA ACTCCCAAACAAAGCCATAAAGTATTGAACAGAATTGAATCAATTTTTTTCATCATCTGAGGTAGATATGCCTTGAGTTT TTCCAAATAGATCAGTGTCTAGGTAGGGTTTACACAGACATCAGTTAGGATATATGTGCTGGATATTGAGTTTGATTTCT TTTGATGTAATCTAGTAATCTAGTACTATTTTGAGTAATGACTTTATGGAACTTTAACTTACAATCATTAAAAGATATTT ATAGCTAGCCATTAGCTTCTTCGCAAATGGCTTTGTCAAAAACTTTTGCTTCTGTAACCATTTTGTAATGCTAGTCTTAA TATGACTAAAACTAGTATCTTTCAGGCTACCTATCCTAGAACATTAGGATTTAAGAAATGCTCTTTCACACCAGGTGCTT TAGAAAAATGGGGGAACACAGTATGTGTACTTAAAAAAATTGGTTGTTCTGGTTTTTGAGATTATATTAGATGTCATTCT TGTCTAGGGTTGCTTGTCAAAATAAATTCTTGTCTAGGGTTGGAAAAGTCTTCCTGCAGATGGACATTTTGATGCACTCT TCAGTAATTTTGGACCTTATGATTTGCAAATTTGTCTATCAATTTTCAACTAATTATGCTCTGTTTGTTTACTGAGTTGT GAACCTATCCTGAGATTTGTGAATTTTGTCCTTCAATTTTGAATTCTGATATTCACTTGGTTTGAATTATTGGCTGCTTG AAGATTATCTAAAACTTTGTTATTGTGATGATAGAATGTTGAATCTTAACTTTGCATACAGTTTCAAAATAAGTTTGGAT TATATGATAGGTGTTTTAACTTTGTTTGCACAGACTCTCTGAGTCTGATAACTATAACTTGTTCATTTCACTGATTAGTA ACTGGGGTGCTGAGTCTAATGTAATAGTGGGTTTATATATTTTGTTAGAGCTAAACTTTTAACAGTTCTGGTTATTAACT GGCAAGTTTTCCTTAGCATAATGAATTTTCTATGTTAGTCTCTACAATTTTCTCTAATTCAAACACAAAGATAAGCGGCA AATATCTAAAATTTATAATGATATCTATTTATGGAATTAAGGCCTATTTTGTGGAAGGCCCTGTTAATTAATAGATTGTT AGTTAAAACTTAGAAGATTACACTGAACATTTATTCCCATTGAATATTGCATGTGTATTAGTGTACGTTGAAGCTGCAGC AGACATGATATAACCCTATTGTGTAGTTGTCTAAAGCTTTTATCAAATTTATGGTCCATACATTATCTGCTGTAAATAAT TTTCTTTGTGTGTAAATTATTATTCAATCAGAATATGGAAGCATATTCTTCTTTTAGCTTTGTGTTTTGTAATTTTCCAA TTCTTGCATGAACAATTCATAATGACATCTTTTCTTTCTTTTCTTTGTGGATGCAGAAAAGTCTCGCAGATGGAGGAGAT CTTGACTATTAATGTCAAGCCTGGTTGGAAGAAGGGGACGAAGATCACCTTCGAGGAGAAGGGAAATGAGCAACCAAACA TGATACCTGCGGACCTTGTTTTCACCATCGATGAAAAGCCGCACAATGTTTTCACTCGTGATGGAAATGATCTGATTTTC ACTCAGAAAATATCTCTTCTAGAAGCTTTAACTGGCTGTACAGTGAACCTCACTACACTGGATGGTAGAACCCTGACTGT ACCAATCAACAATGTTGTTCATCCTGATTATGAGGAGGTCCTTCCGAGAGAAGGAATGCCGCTCCCAAAGGATCCAACAA AGAGAGGAAACTTGAAAATAAAGTTCAACATCAAATTCCCAATGCGGATCACTGCAGAACAGAAGGCAGGAATGAAGAAA CTGCTGGCTCCCTGAAGTAAATTAATTGGCACAATTTGTGTGGCTCATTTATATCATGATGTATACTAGACTCATAATCT TGGCAGGAGGCCAATGCGATGAATTTGGTTATTTTTTATAGAATATTGTAATTTAATTCAGGGATTTAAATTATGGTTTG ACATTGAATTTTTTTGGTTGGTTGGTTAACCAATGAGATAGAATTGAGTACAAGTTCTTGCAGGGGTTATTGATTATAAA ATGTGGGCACTTGCTAGATATTCAGATACATCATGGGATTAGGTTGTGGATGGTTCTCAAATGTGAGGTGAGACTCACTT GACTTGTCTCTTGGAGGCATTGTTAGGATAGATGAAAAGCTTTGGATAAGAGTTAACTGACTTTCCTAGAATTATAGCAT TTTTAGATCAACTTATTTTTTATCAGAA
CDS sequence (LotjaGi3g1v0447700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTGGACTACTACAATGTCCTGCAGGTTGATAAGACTGTAAACGAGGATGATCTTAAGAAGGCTTACAGGAAGCT AGCCATGAAATGGCACCCTGATAAGAACCCCACTAACAAGAAAGAAGCTGAAGCCAAATTCAAACAGATTTCAGAAGCCT ATGATGTGTTGAGTAATTCTGAGAAGAGGGCTGTGTATGATCAGTATGGGGAAGAGGGGTTGAAGGGTCAGGTGCCACCT CCTGATGCTTCTGGTGGTGAAGGAACCGCTTTCTTTTTCGACTCCGGAGGTATGTCGTCGTCGTTTCAATTCAATAACCG GAATGCCGATGACATTTTTCAGGAGTTTTTTGGGTTCAACCCCTCTGGGGGCATGGGAAGGGGTGCTGGTGCTGGTGCTG GTGCTAGTGCTGGCGGCGGCGGTGGTGGCAGAGGAATGAGGCCGAGGGTCCCTAATGAGATGTTTCCTGACGACTTATTT GCATCTTTTCCGGAAGGAGGAGGACAAGGTGATGGTCGTCGCAAGGCTCCTCCCATTGAGAACATGGTGCCCTGCACTAT GGAGGAGATATACAAAGGGACCACAAAGAAGATGAAGATCTCTAGGGAAATTATTGAGGCCACTGGAAAAGTCTCGCAGA TGGAGGAGATCTTGACTATTAATGTCAAGCCTGGTTGGAAGAAGGGGACGAAGATCACCTTCGAGGAGAAGGGAAATGAG CAACCAAACATGATACCTGCGGACCTTGTTTTCACCATCGATGAAAAGCCGCACAATGTTTTCACTCGTGATGGAAATGA TCTGATTTTCACTCAGAAAATATCTCTTCTAGAAGCTTTAACTGGCTGTACAGTGAACCTCACTACACTGGATGGTAGAA CCCTGACTGTACCAATCAACAATGTTGTTCATCCTGATTATGAGGAGGTCCTTCCGAGAGAAGGAATGCCGCTCCCAAAG GATCCAACAAAGAGAGGAAACTTGAAAATAAAGTTCAACATCAAATTCCCAATGCGGATCACTGCAGAACAGAAGGCAGG AATGAAGAAACTGCTGGCTCCCTGA
Protein sequence (LotjaGi3g1v0447700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVDYYNVLQVDKTVNEDDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYDVLSNSEKRAVYDQYGEEGLKGQVPP PDASGGEGTAFFFDSGGMSSSFQFNNRNADDIFQEFFGFNPSGGMGRGAGAGAGASAGGGGGGRGMRPRVPNEMFPDDLF ASFPEGGGQGDGRRKAPPIENMVPCTMEEIYKGTTKKMKISREIIEATGKVSQMEEILTINVKPGWKKGTKITFEEKGNE QPNMIPADLVFTIDEKPHNVFTRDGNDLIFTQKISLLEALTGCTVNLTTLDGRTLTVPINNVVHPDYEEVLPREGMPLPK DPTKRGNLKIKFNIKFPMRITAEQKAGMKKLLAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 353 | 353 | 1.0E-158 | – | |
| PANTHER | 1 | 353 | 353 | 1.0E-158 | – | |
| Gene3D | 2 | 130 | 129 | 4.1E-35 | ||
| SUPERFAMILY | 3 | 73 | 71 | 5.5E-30 | ||
| SMART | 3 | 62 | 60 | 9.4E-29 | ||
| CDD | 4 | 59 | 56 | 5.72357E-24 | ||
| ProSiteProfiles | 4 | 70 | 67 | 23.948 | ||
| Pfam | 4 | 67 | 64 | 6.2E-26 | ||
| PRINTS | 6 | 24 | 19 | 2.8E-27 | ||
| PRINTS | 24 | 39 | 16 | 2.8E-27 | ||
| Coils | 40 | 60 | 21 | - | – | |
| PRINTS | 42 | 62 | 21 | 2.8E-27 | ||
| ProSitePatterns | 47 | 66 | 20 | - | ||
| PRINTS | 62 | 81 | 20 | 2.8E-27 | ||
| SUPERFAMILY | 173 | 269 | 97 | 3.4E-17 | ||
| Gene3D | 175 | 257 | 83 | 1.5E-30 | – | |
| Pfam | 181 | 337 | 157 | 2.8E-43 | ||
| CDD | 183 | 337 | 155 | 1.43552E-48 | – | |
| Gene3D | 258 | 337 | 80 | 7.9E-27 | – | |
| SUPERFAMILY | 260 | 346 | 87 | 9.94E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0447700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…