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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0450500 |
| Transcript ID | LotjaGi3g1v0450500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat thioredoxin TTL1-like protein; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|I1M3M3|I1M3M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86410387..86415900) extracted from Lotus japonicus Gifu genome v1.2.
AGAGAATCTAGCATAGAGAGTAAGAAAAATCCACCATTCTTCTCTCTCACTCTCTGTCGAAATAAAATCTACAATTTCCC TCCATGGTGTTGTTCTATAACAAGTAACAACAATCAATTCAATGCACCATATCTCACATCTTTCCTTTCCATTTCTATCT TAAACTCAAAACCAAACCAAACCAAGCACACTGATTACCATTAACCACACTTAATTAACCAACAAGCCTTTTGTATCAAT CAAATCTCCCTCCTATATATATAAAAACAACATCACCAAACAACAACATTAAAATTCAGACACACAGAATTAAAATGTCC AAGACTATGCAACAACAACAACAACAACAACAGGGTTTCGATTCCCTGTGTTGCGACTACAATAAGCCCGATTCCAAACA ACTCGATCTGCCCGCTTCTTCCACCGCCGTTCCTCCCAAACTCCCCACCAGCCACTCCGGCGAGCTTTCTCGCGCTTCCA GACCCGCTCACCGGAGATCGGTCTCCGCCGGAGCTCCGCTAATCTACTCCGGCGGAGCCAATGGTGGTGGAGGTTCTGGT TCTGGTTCGAGTCCGACCCTGCTTCCGACCGGGAACATTTGCCCCTCAGGGAAGATCCTCAGACCGGGTTTGCCATCTCG CGGCCCGAACCGGACAGAAGTTTTGGGTTCTGGCACCGGGAACTATGGCCGCGGTAACATAGTTCGCGGCGGCGGCGGTG GGAACTCGGTGGCGGCGGATTCACCGGTGAAGCGGGCGATGCGTGGCTATGATCCCGAGGAGGCGAAGAGGGTTGGGAAC GAGATGTATAGGAGTGGGAACTTTGCGGATGCGTTGGCATTGTATGATCGTGCTGTTGCCATGTCGCCTGGGAACGCTGC TTACCGGAGTAACCGTGCGGCGGCGCTCACGGCGTTGGGGAGGTTGGGTGAGGCGGTTAGGGAATGTGAAGAGGCTGTGA AGTTGGACAATGGTTATGCTAGGGCTCATAAGAGGCTTGCTTCTCTTTATCTAAGGTATCTAACTATGCTCTCTCATGTT ATGCTATGATATGTTATCTAAACTCTGCAGTTTATCTGGATTCATCATTTGTGTGCTATAATGAAATGTGATAATACTAG CATTTTGCAATGACTTGGTTCACCCAATCATATTGATTTTGGTATCAGCTCATTTTGGCTTATTGCTTAGTATGATGAAT TGATGATGCTTGAAATTGAATGTCTAATTTCTATTGGTTTTGTTGACAATGGAATAGGAGGGGTTCAATTTTTTGTTGGG TTATTAGATTTGGAATTTTCTATATATGTAGAATCGGGCAGGTTGAGAATTCGCGGCTCCACCTGTGTCTCTCTGGGCTG CCGGAGGATCCATCGGAAGAGCAGAAGCTGTGCTTGTTGGAGAAGCAGCTGAGTCGATGTGCTGATTCACGGAAGATTGG TGATTGGAAGAGGGCACTTAGGGAATCCGAGGCAGCCATTGCTGTTGGAGCAGATTTCTCACCTCAGGTAGGTTTTGGTT GATGAAATAAGCCCATAATGTCTGGGTCAGTTCCGTTAAAGATAGCATTTATGTGTTTTTCGAGCTTGTTTGAATTAACT TATGTTTCATTAGAATCGCTCCTCACATAAGTTTCTTCCCATAAATGATTGTATTTAAAATCAATTAAAGAAATATTTAT AAACATGCTTATGAGTCTGTTTTTTATTTTAGCCCAATCAATGTGCATTGTTTACATTGGCTAACTTGTTGGTTTGCTGC TACCTTCAGTTAGTTGCTTGTAAAGCTGAAGCTTATTTAAAACTCCATCAACTTGAGGATGCTGAATCCTGTGCTTCCAA AATTCCCAAGATGGAAGGTTGTCCTCCATCCTGCTCTCAAGCCAGGTTCTTCGGCATGATTGGTGAAGCCTATGTGCATT TGGTCTCCGCTCAGGTTGAAATGGCATTGGGAAGGTAAAACACCTAAGACACCAAATCCAAAACTACATAGAACTTTTGT GTGAATGAGTGAGAAACCAATGATGGGTTGTTGCAGGTTTGAGAATGCTGTCACAGCAGCAGGAAAGGCTAGGCTGTTAG ATTATAGTAATTACGAAGTTTCTAGGATTGTAAATACTGTGAACAGAGTGGCGCAAGCTCGTTCAAGGGGCAATGAACTT TTCAGTTCTGGAAAATTTTCTGATGCTTGTACTGCTTATGGAGAAGGCCTCAAATATGACAATTCCAACTATGTTTTATA TTGCAATAGAGCTATTTGCTGGTCTAAACTTGGCCTATGGGAACAATCAGTTCAAGACTGCAACCAAGCTCTTAACATTC AGCCAAACTACACCAAAGCCCTTCTCCGCAGGGCTGCGTCAAATGCAAAGGTGAGCCCTCCTTGCAATGCGCATATATGG GTCTGTTCATTTTCATTGTTGTTTTGTTGTCTGGATTTGTTTCATTGTCGTTTTTAAAAATGTATAATCTTGTTGCAGCT TGAAAGATGGGCAGAAGTTGTTAAAGATTACCAGGCCTTGAAACACGAGCTGCCTAATGACAATGATGTTGCTGTATCTC TTCATCAAGCTCAACTAGCATTGGAAAAATCTCGTGGCCTGGCCAATGGTACCAAGTTTGGAGTTGAAGTTGAAGAAATC TCTTCAGTAGATAAATTTAAATCTGCGATTGCTTCTGCTGGTAATTTTAATACCTTCTTAAAATGTTGAGTTAGCATTTT TCTAGCTTCATTTAAGCGTACTTCTTTTTATTAATGCAAATCTGAATTTGCAGGTGTTTCGGTAGTTTATTTCAAAGAGA CATTAAATGAACAATGTGAAGAAATTTCTCCATTCATCAATACATTATGTGTTAGATATCCCTCTGTTAAATTTATTAAG GTACACAATGTTGTAAGTGGCTTCCATGAATTTACTAACATAATTGTCCTATCTGTCTAATTTTCTTTATAATTTAATTG AAGGTGGACGTGGAGGAGTGTCTAGCAATAGCAAAAGTTGAAAGCATAAGAAGTGTTCCCACTTTTAAAATTTATAAAAA TGGGGAGAAGGTGAAGGAGATGTTCCGCCCAACCCATCAGGCCTTAGAGGACTCAGTAAGGAAAAGTAATAGCATCTAGA TTTTTGAATTCATACTCTCATTATTTGCATTCACCAGCAACTCAAACCATAGCAATTGAAGAAGGTGCACCAAGAAAGCA CCAAATATTCTTTAGTTTACGTTAGAATTTCAGCTTTTCTCTGTGACACACACGCACACGTGGATACCAATTTTTCAGTG CTTTTAGACAGGAAAACCTCATAGAGATAGATGTTCGTTAGCATTTTTGAAACCTTATATGTATATTTCTTCCTTTGTTC CTCTGATGTGCTTCCCAAAAGAGATATTTTTTCCTCAATACCTTTTATTTTGTTGCATGAGGCTTAAGAAAAATGCTTGA GTAAATATATACTCCAATCTTCAAACAATGAGGTAGATAGATTTGGTCCCTGAACATATTGTAATTGTCTTATTCAGTTC TTCAGCATTTTAAATGCCATATCAGTTAAAACTGGACAAAATTGCAGATATTGCATGTTCTGAGGTTAACAGCTCTGTTA GCATGGTTAATAAAGCATCACACAATGCTGACACTACATTTGGATACATTGATAGATGGGGTATCAGGTATGTAAAGTAT TCAAAAGTCAAAACAACAAACCAAGAAAAAAAAACGTGATAGAATATGTTATAAATGTGATACTTTCGCATCCATTATTT GATATAGCGAGCTTGAAAAGATAGATCAATTAAAACTGTAGATATTGTAAGCTTGACATATAGCTAACAGAATCCTGTTA CATGAAATAGAGTAGAGAGATCAAGCAGATGTTTTTTATTCTAAGCCAATTAAGCATCTATATTGGCTTGCTGGCTTACT CTTGAGTGATCTTTTTTATCTCACTGGCCTGCAGCAAAGGCCTCAACTGGGAAAGTCTTGGTGATACCAGCAAGACTCTT GAAGTGAACCTTCCCAGTTGGTTGGTCATCAACAGTGATCTCACTCACAGGGGGCCATAGCATGAGCTCTTTAGCCTTCA CACCCTTGAGCTTCTTGATCTTTTTCTTTGAAATGAACCCTGTGATCTCGGTGTCATAGCTCACGAGCTTGCTCACCATC TTGAACTGGTGCTCCACCTTCTTCTTCTGTGCGATCCACATGTAACCTGTGGCTTTCACATGACCAACTTCGATCACGTC AGCCAGAGGTAGAAGCCCTGCTGGAAGTTCAAACTCTTGCAGCAGGGAAACAGCCATTTTCAGGCCTTCTTCATGCCCTT TCTTCACAATCCCTCCTTCCCTTTCGGCCATTGTTTCAATGCTGAGGATAGAAACTGTTTTGTTGCTTTGGAATGTGAAT TAGTTGATTTGAGAGTTTTCTTTGTGTGAGAGTATATATAGATTCTGCTTGAGGAGCTAGCGGTAATGAGGGACAATATT TGTGCTTGGTAGAGATCGAAGTAACTAAATTTCTGGTATGTGCCGTCCAATGTGGTCCTTAATTTTGCTTCTCTTCACCA CCTTGTCAGCTAGCATTTGTCATGTACAATACCAATTTGAATTTTACCTTTTCGAGCATTGTTATGATGAAAGTTACACA AAAATTGTAGGACGTGGGTGTGATTTTCTAGAAATAGTGACCAAGGCAGAGATGTAGAAGATGCCAAAATATCCACCTGA ATAACCAATGCAAAACCATGGAGAACATAGTGTGTGGGTGTATGAAAAAGAATGGTTTTTGTTTGTTTATGTAAAAGAAA AAAAATCTCACATTTTTCTAGGTAAGATGTTCAGGAAATTGTTGTATAATTCTTCTAACTAATGTTTTTTTTATTATTTG AACTTGTGATTTCATTTTTATAGGGGTTACCACTAGACCAACATGAGATAAATAACTAAGATAAAATAAATAAATTTACA TAAAAGGATGAGAAGATAGGGAATTGTAAGAGGAATTAAAAATAGTATTTCAGTTTGTAAGTAATAATGTATTTTTATAT AGTTAGAATTAAATATATTTAAATATAAATTATATTTTTGAATTTGAAATGAATAGGCAAGAGGGAAGGAGCTGATGGTT CTGCCGAAGGAGTTCTTAAAGCCTTATGGCGTTTTGACTAGGGTGAGGAGCGTTATTTTGATGGGGGAAGCGATGTGGCA TGAGGTATGACTGCACAGATGATGTTGCCCTCTACCAGATAGTGGCCCAAATCAATGTGCACAAGTCGTCTTTGGGGAGT TGAGGTAGTTCCTTGGGGTCTTAGTAGTTTGAGGTCTTGGTTTGTTCCTAGTTCTTTTAGGGTCTTAATAGGTTTTGGTT CGTTAGGGTTTTTGCATGTTTGCCTGTTGGCCTTGGGAGGTTTTGTATTTAGGTTGGGTTGTTTGGGTAGTTGTTAGTCT TACTGATTTTTTAAGCCCTTTTGAGGAGGGTTGTATATCTTGATCAATTTCTAAATTTCCTCATTTATATATAC
CDS sequence (LotjaGi3g1v0450500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAAGACTATGCAACAACAACAACAACAACAACAGGGTTTCGATTCCCTGTGTTGCGACTACAATAAGCCCGATTC CAAACAACTCGATCTGCCCGCTTCTTCCACCGCCGTTCCTCCCAAACTCCCCACCAGCCACTCCGGCGAGCTTTCTCGCG CTTCCAGACCCGCTCACCGGAGATCGGTCTCCGCCGGAGCTCCGCTAATCTACTCCGGCGGAGCCAATGGTGGTGGAGGT TCTGGTTCTGGTTCGAGTCCGACCCTGCTTCCGACCGGGAACATTTGCCCCTCAGGGAAGATCCTCAGACCGGGTTTGCC ATCTCGCGGCCCGAACCGGACAGAAGTTTTGGGTTCTGGCACCGGGAACTATGGCCGCGGTAACATAGTTCGCGGCGGCG GCGGTGGGAACTCGGTGGCGGCGGATTCACCGGTGAAGCGGGCGATGCGTGGCTATGATCCCGAGGAGGCGAAGAGGGTT GGGAACGAGATGTATAGGAGTGGGAACTTTGCGGATGCGTTGGCATTGTATGATCGTGCTGTTGCCATGTCGCCTGGGAA CGCTGCTTACCGGAGTAACCGTGCGGCGGCGCTCACGGCGTTGGGGAGGTTGGGTGAGGCGGTTAGGGAATGTGAAGAGG CTGTGAAGTTGGACAATGGTTATGCTAGGGCTCATAAGAGGCTTGCTTCTCTTTATCTAAGAATCGGGCAGGTTGAGAAT TCGCGGCTCCACCTGTGTCTCTCTGGGCTGCCGGAGGATCCATCGGAAGAGCAGAAGCTGTGCTTGTTGGAGAAGCAGCT GAGTCGATGTGCTGATTCACGGAAGATTGGTGATTGGAAGAGGGCACTTAGGGAATCCGAGGCAGCCATTGCTGTTGGAG CAGATTTCTCACCTCAGTTAGTTGCTTGTAAAGCTGAAGCTTATTTAAAACTCCATCAACTTGAGGATGCTGAATCCTGT GCTTCCAAAATTCCCAAGATGGAAGGTTGTCCTCCATCCTGCTCTCAAGCCAGGTTCTTCGGCATGATTGGTGAAGCCTA TGTGCATTTGGTCTCCGCTCAGGTTGAAATGGCATTGGGAAGGTTTGAGAATGCTGTCACAGCAGCAGGAAAGGCTAGGC TGTTAGATTATAGTAATTACGAAGTTTCTAGGATTGTAAATACTGTGAACAGAGTGGCGCAAGCTCGTTCAAGGGGCAAT GAACTTTTCAGTTCTGGAAAATTTTCTGATGCTTGTACTGCTTATGGAGAAGGCCTCAAATATGACAATTCCAACTATGT TTTATATTGCAATAGAGCTATTTGCTGGTCTAAACTTGGCCTATGGGAACAATCAGTTCAAGACTGCAACCAAGCTCTTA ACATTCAGCCAAACTACACCAAAGCCCTTCTCCGCAGGGCTGCGTCAAATGCAAAGCTTGAAAGATGGGCAGAAGTTGTT AAAGATTACCAGGCCTTGAAACACGAGCTGCCTAATGACAATGATGTTGCTGTATCTCTTCATCAAGCTCAACTAGCATT GGAAAAATCTCGTGGCCTGGCCAATGGTACCAAGTTTGGAGTTGAAGTTGAAGAAATCTCTTCAGTAGATAAATTTAAAT CTGCGATTGCTTCTGCTGGTGTTTCGGTAGTTTATTTCAAAGAGACATTAAATGAACAATGTGAAGAAATTTCTCCATTC ATCAATACATTATGTGTTAGATATCCCTCTGTTAAATTTATTAAGGTGGACGTGGAGGAGTGTCTAGCAATAGCAAAAGT TGAAAGCATAAGAAGTGTTCCCACTTTTAAAATTTATAAAAATGGGGAGAAGGTGAAGGAGATGTTCCGCCCAACCCATC AGGCCTTAGAGGACTCAGTAAGGAAAAGTAATAGCATCTAG
Protein sequence (LotjaGi3g1v0450500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKTMQQQQQQQQGFDSLCCDYNKPDSKQLDLPASSTAVPPKLPTSHSGELSRASRPAHRRSVSAGAPLIYSGGANGGGG SGSGSSPTLLPTGNICPSGKILRPGLPSRGPNRTEVLGSGTGNYGRGNIVRGGGGGNSVAADSPVKRAMRGYDPEEAKRV GNEMYRSGNFADALALYDRAVAMSPGNAAYRSNRAAALTALGRLGEAVRECEEAVKLDNGYARAHKRLASLYLRIGQVEN SRLHLCLSGLPEDPSEEQKLCLLEKQLSRCADSRKIGDWKRALRESEAAIAVGADFSPQLVACKAEAYLKLHQLEDAESC ASKIPKMEGCPPSCSQARFFGMIGEAYVHLVSAQVEMALGRFENAVTAAGKARLLDYSNYEVSRIVNTVNRVAQARSRGN ELFSSGKFSDACTAYGEGLKYDNSNYVLYCNRAICWSKLGLWEQSVQDCNQALNIQPNYTKALLRRAASNAKLERWAEVV KDYQALKHELPNDNDVAVSLHQAQLALEKSRGLANGTKFGVEVEEISSVDKFKSAIASAGVSVVYFKETLNEQCEEISPF INTLCVRYPSVKFIKVDVEECLAIAKVESIRSVPTFKIYKNGEKVKEMFRPTHQALEDSVRKSNSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 18 | 18 | - | – | |
| MobiDBLite | 1 | 62 | 62 | - | – | |
| PANTHER | 22 | 623 | 602 | 0.0 | – | |
| PANTHER | 22 | 623 | 602 | 0.0 | – | |
| MobiDBLite | 29 | 52 | 24 | - | – | |
| MobiDBLite | 76 | 137 | 62 | - | – | |
| MobiDBLite | 78 | 93 | 16 | - | – | |
| Gene3D | 153 | 510 | 358 | 4.9E-73 | ||
| SUPERFAMILY | 154 | 381 | 228 | 1.34E-24 | ||
| SMART | 154 | 187 | 34 | 12.0 | ||
| ProSiteProfiles | 154 | 241 | 88 | 15.223 | ||
| ProSiteProfiles | 154 | 187 | 34 | 9.44 | ||
| Pfam | 163 | 220 | 58 | 4.3E-7 | – | |
| SMART | 188 | 221 | 34 | 0.55 | ||
| ProSiteProfiles | 188 | 221 | 34 | 5.31 | ||
| SMART | 346 | 379 | 34 | 90.0 | ||
| ProSiteProfiles | 392 | 425 | 34 | 5.251 | ||
| SMART | 392 | 425 | 34 | 31.0 | ||
| ProSiteProfiles | 392 | 493 | 102 | 13.101 | ||
| ProSiteProfiles | 426 | 459 | 34 | 6.579 | ||
| SMART | 426 | 459 | 34 | 1.1E-5 | ||
| SUPERFAMILY | 435 | 622 | 188 | 4.7E-22 | ||
| SMART | 460 | 493 | 34 | 47.0 | ||
| Gene3D | 511 | 626 | 116 | 1.6E-19 | ||
| Pfam | 529 | 616 | 88 | 8.0E-12 | ||
| CDD | 532 | 608 | 77 | 2.89868E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi3g1v0450500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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