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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0459400 |
| Transcript ID | LotjaGi3g1v0459400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | External alternative nad(P)h-ubiquinone oxidoreductase b2, mitochondrial; TAIR: AT4G21490.1 NAD(P)H dehydrogenase B3; Swiss-Prot: sp|F4JJJ3|NDB3_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial; TrEMBL-Plants: tr|A0A072UKI3|A0A072UKI3_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi3g1v0459400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87408671..87413225) extracted from Lotus japonicus Gifu genome v1.2.
TGGATGAAGCTTACTCAGTGCATGTGAAAATCATTCTACAATTGAGTTTAAACCAAAATCAATTATGGGGAGAAACTTCT GTTAGTAGCTTTTGAATGTCATAATATTGATTATGAGAAAGAGCAGTTGACTGAGAACAGTAAAAGTGCATCTAAACATG CAAGTAACCCCTTTTCTCTGGAAATTGGAATTCAAATTTTTCTTCATATTATCTCTCTTTTTTGGGTTGCAGTGGTGGAG GTGTGGTGGCATATGCTGATGCCAAACCAGCACAAAGTGACAATGTTGGTCACAACCGGAAAAAGAAAGTGGTGGTTCTG GGAACTGGCTGGGCTGGAACCAGTTTTGTGAAAAACATGAAAAGCTCCTCCTATGATATTCATGTGGTTTCACCACGTAA CTATTTTGCATTCACTCCTCTGCTACCAAGCGTCACTTGTGGCACAGTGGAGGCTCGCAGCGTTGTCGAACCGATTCGCA GCATCTCCCGGAAGGTATTCTCTTTCCCTTATATCATAGTCATTTTCAAATCTTCATCTTTACTTGTGCAATTTGAATAA TTTGAGTATGCAATGTACATCTTATCATGCCATCAAACCTAAGTAACTCATCACTTAGAATGTTCTTCATGCCATGGCAT TAAATTGGGGTAGCAGTTGTGTCGCAATCCTTGAAATTGAGAGTAAATGTGACCAGGGTTTCAAATTGTGGTTTGCAACT GCAATTGTGGTCGTAATGTAACGGGATTTTGGTGGAGTCCCTGCATCGCCACCTCGACCGCATTTGAATTCAAAGATATT AAGAAACATTATGTTTGATAAATTATGCATAGTGTTTCAGCTTCAAAGATGTTTGATTAAACTATATCATAGTATACTTA TAAGTGAATTCGGTTCATGCCCTGCATCAGAGTGGTCTAGATATTCAATTCAGTGAAGCTGAATGCTACAAGATCGATCC CAAGAACAACAAAGTTTACTGCCGTTCTGGTCAAGACAAAAAGCTAGGTGGCCCTGAAGAATTTTCCCTTGATTATGATT ACTTGGTAATAGCAATGGGAGCACGTTCTAATACCTTCAACACACCTGGTGTTCAGGAGCATGCTCACTTCTTGAAGGTA CACATATATATATTTTCATTTCACTCTCTTAGGGAAAAAAACATCTCTGAGGAAAAAGAAACTTTTGTTTAGCTGAACTA CTCTTGAATCTTTCTGAAGGAAGTGGAAGACGCTCAAAGAATCCGCCAAACAGTGATTAACCTTTTTGAAAGGGCAAGCC TCCCTTCTTTATCTGAGGAAGAGAAGAGAAAGCTTCTCAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGGGTAGAGTTT GCTGCAGAGCTTCATGACTTTGTACATGAGGATCTATCTATATTGTACCCTTCTCTTAAAGACTATGTGAAGATTACTCT TCTGGAAGCAGGCGATCATATCTTAAACATGTAATATTTTTTTAATTCTATTCGGATATAAAGGCTATTGCTTAACTGAA GTAAAAAATGAGCATGTGAAAATTCACAATATTTGGATGTATAGTGTTTAAGAGTGAATTGTCAATTTGGTCCCGGAAAG ATTTTGGCATTGGTAATTTAGCTGTTAGAAGAACGAAATGTGTTTGAAAGTTCCTAAATGTGTAAAACACCGGTCTAGTT AGCCCTTCAGGACATATTTGGTAAGCTAAAATGTCGGTCAAAGACTAACTTGACTGACAATTTACACGTTCAGGGACTTT CAATATATTTCAGCCTTCTCGAGACTAACTTGATAGCGACAAAATCTTTAAGGGATCAAGTTGACCATTCACTTAGTGTG TAAATAGGGTGCTAACTTGCACACTTTTCACTCTATTTCAGCATTCTCTTTTGCCATTTGCAACTTCAACTCTTTTTTTG TTTTCTTTCTATTTGATTTTTCAAATGTGCATTGGTGATATAGTTTATTGGTTTAATGCAGGTTTGACAAGAGAATTACG GAATTTGCTGAAGAAAAGTTTTCCAGAGATGGAACTGATGTAAGGTTGGGATCTATGGTTGTCAAAGTTAGTGCAAATGA AATCTCTGCCAAAGAAAGAAGCACTGGTGAAGTTGTTTCTATACCTCATGGAATGGTAGTTTGGTCAACTGGTATTGGTC CTCGCCCTGAAATACTTGAGTTCATGAAGCAGCTTGGCCAGGTTTGTTTCTTTTTGTTTCCTTCTCTCAATCTAAAGGCT CGGTTTGGAAGTAAGTCACACAATTTTTGCTTGCTTTGAATTCTCTGTGAGACAGATTAACAGACGTGCAATTGTTACTG ATGAATGGCTAAGGGTAGAAGGATGTGACAACATCTATGCTCTAGGTGATTGCGCCACTATAAATCAGCGTAGAGTTATG GTATGTGACTCTGTGCAATCTATAAATTGGATATGTCTATCAGTCTACCCTCCTACTAGTCCTGAAATATTACTTTCTTT TTCATTCATGAGTTAAAAATAACTTGCAGCCTTTGAACATGTTTGGATCAGTTTGTTTTTCTTCTCACAATCAATTTTGG CATTCATAAGCTACTCATAAAAAGTTCTCTCCAGAATTGATTTTGGCTTTAAAATAAATTGGATAACATGTCTGTATCGA CCTCTCTTACCTCCGAATCAATACTAACAATTAAAAACTACTAACATAAACTCCTCAGACTACTTTCTTTTTCATTCACG AGTGATTAATAACATGCAGCCTTTTAGCATGTTTGGATTAGTTATTTTCGTCAGAATCAATTTTGGCACTAACAAGCTAC TCATACAAGCTTCTCTGCATAATTGCTTTTGGTTTTAGAATCAATTGTATATGTATGAATCAGCTTTTCTTATCTCATAA TCAATTTTGACACCCTGATTCTTCTCCCAAAATTGTTTTTGCCTTTTAGAATCAATTGGAGAAGAATTTCCAAACAAGCA ATTTATCTTTATGGATCTATATCAATCACCTTCTTTCTGTTGTAACCGATGATCTTTCATTTAGCCTATAATATGATTTT GGAATGAAAACAGTAGTAGCCACTCCACCCAATTATAGTTCCTGTTGATAAATGACATGTTATTTTTATAAGAAACCATT AGCATTTTAGCAACACAATTTGGGCAGCAATTCTCTGCTGAATTTCAGTATGACATTTTGAAGTTTTGAAGTGTTCTCCT TTTGTTTGCCATGGTTTTACCAGGAAGATATAGCTGTCATATTTAGCAAGGCAGACAAAGACAATTCTAGGACATTGGAT ATTAAAGAATTTCAAGACGTTGTTGGTGACATTATTGAGAGGTACCCACAAGTGGGGATTTATTTAAAGAAGAATCAAAT GAAAGATATGGCTACCTTGCTAAACAAATCTCAGGAAAGCTCTCTTACAGTAGACATTGAGTACTTCAAAGAAGCACTTT CCAAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTACGTGCACATTATGTGCTATGTACTTTTCAATTA TGCTTGATAAATTATCTACTTAGGAAATGTCCATTTTCATGTGACCTTGACATGGTTTTTCATATCGATCCCTGCACTTA AGAAATATGAATTGAAGTCTTAGAGCTATATTTGAGGGCTAGCGTGACTACAAAAAGATAGATTGAGGATTAAGTTGACT TAAAGAAGCTCAGGTGAGGACCTTTGTTCATGTTTTTTTCAGTGTAAGGGCTAATATAAAAAATCGTGTCATGGTCGGCC ATGAAAATGACATGCACTCATTTACTATTATGGTGCATGTTTGGATAACAGTTTAATAACGTGAACTAACTTTCATTTCA ATCCTAAGAAGAGTTTCATTCTTCTTTTTTTTTTTCCCTCGAAGTGAGTTCTAACTTCTTCAGTGACAACATATATCCAA ACATAGCCTATAAAAGTTTGTCATATTACTTATGCTTTGGTGGTGGGTTCCAACTTTGAATCATTCTAGGTAGCTTCTCA ACAAGGCATATATCTTGCTGACTGTTTCAATCGCATGGAGTTGTGTGAGAAGTATCCTGAAGGCCCTCTTAGGTTCAGGG GTACAGGACGCCATCGGTTTCATCCCTTTAGGTATGTGCAACTTGCAACTTCAACAAAAAGTGTCTCAAGATGTGTTAAT TTCCTGTTTTCATACTTTCCAAAGCGTATTCAATCGAGCTCATAATAACATCCAATGATTCAAGTTTCTCATTGCCTAAT GTTTTTTTAATTAATGAAAGGTACAAGCATTTTGGGCAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAGCTTCC AGGAGATTGGATTTCAATTGGCCATAGTAGCCAATGGCTCTGGTATTCAGTATACACAAGGTATTATTCTATTTCATATA AACTGCATTTTAAGAGGTTTAATGGTAGTGTATTTTCATCCTCTAACTATTCCCAAACATACAACAGCAAGCAAGTCAGC TGGAGAACAAGAGCTTTGGTGGTATCTGACTGGACAAGGCGATTCATATTTGGCAGGGACTCAAGCCGAATCTGA
CDS sequence (LotjaGi3g1v0459400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGTGGAGGTGTGGTGGCATATGCTGATGCCAAACCAGCACAAAGTGACAATGTTGGTCACAACCGGAAAAAGAA AGTGGTGGTTCTGGGAACTGGCTGGGCTGGAACCAGTTTTGTGAAAAACATGAAAAGCTCCTCCTATGATATTCATGTGG TTTCACCACGTAACTATTTTGCATTCACTCCTCTGCTACCAAGCGTCACTTGTGGCACAGTGGAGGCTCGCAGCGTTGTC GAACCGATTCGCAGCATCTCCCGGAAGAGTGGTCTAGATATTCAATTCAGTGAAGCTGAATGCTACAAGATCGATCCCAA GAACAACAAAGTTTACTGCCGTTCTGGTCAAGACAAAAAGCTAGGTGGCCCTGAAGAATTTTCCCTTGATTATGATTACT TGGTAATAGCAATGGGAGCACGTTCTAATACCTTCAACACACCTGGTGTTCAGGAGCATGCTCACTTCTTGAAGGAAGTG GAAGACGCTCAAAGAATCCGCCAAACAGTGATTAACCTTTTTGAAAGGGCAAGCCTCCCTTCTTTATCTGAGGAAGAGAA GAGAAAGCTTCTCAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTGCTGCAGAGCTTCATGACTTTGTAC ATGAGGATCTATCTATATTGTACCCTTCTCTTAAAGACTATGTGAAGATTACTCTTCTGGAAGCAGGCGATCATATCTTA AACATGTTTGACAAGAGAATTACGGAATTTGCTGAAGAAAAGTTTTCCAGAGATGGAACTGATGTAAGGTTGGGATCTAT GGTTGTCAAAGTTAGTGCAAATGAAATCTCTGCCAAAGAAAGAAGCACTGGTGAAGTTGTTTCTATACCTCATGGAATGG TAGTTTGGTCAACTGGTATTGGTCCTCGCCCTGAAATACTTGAGTTCATGAAGCAGCTTGGCCAGATTAACAGACGTGCA ATTGTTACTGATGAATGGCTAAGGGTAGAAGGATGTGACAACATCTATGCTCTAGGTGATTGCGCCACTATAAATCAGCG TAGAGTTATGGAAGATATAGCTGTCATATTTAGCAAGGCAGACAAAGACAATTCTAGGACATTGGATATTAAAGAATTTC AAGACGTTGTTGGTGACATTATTGAGAGGTACCCACAAGTGGGGATTTATTTAAAGAAGAATCAAATGAAAGATATGGCT ACCTTGCTAAACAAATCTCAGGAAAGCTCTCTTACAGTAGACATTGAGTACTTCAAAGAAGCACTTTCCAAAGTAGATTC CCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTTCTCAACAAGGCATATATCTTGCTGACTGTTTCAATCGCATGG AGTTGTGTGAGAAGTATCCTGAAGGCCCTCTTAGGTTCAGGGGTACAGGACGCCATCGGTTTCATCCCTTTAGGTACAAG CATTTTGGGCAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGCCATAG TAGCCAATGGCTCTGGTATTCAGTATACACAAGCAAGCAAGTCAGCTGGAGAACAAGAGCTTTGGTGGTATCTGACTGGA CAAGGCGATTCATATTTGGCAGGGACTCAAGCCGAATCTGA
Protein sequence (LotjaGi3g1v0459400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGGGVVAYADAKPAQSDNVGHNRKKKVVVLGTGWAGTSFVKNMKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVV EPIRSISRKSGLDIQFSEAECYKIDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEV EDAQRIRQTVINLFERASLPSLSEEEKRKLLSFVIVGGGPTGVEFAAELHDFVHEDLSILYPSLKDYVKITLLEAGDHIL NMFDKRITEFAEEKFSRDGTDVRLGSMVVKVSANEISAKERSTGEVVSIPHGMVVWSTGIGPRPEILEFMKQLGQINRRA IVTDEWLRVEGCDNIYALGDCATINQRRVMEDIAVIFSKADKDNSRTLDIKEFQDVVGDIIERYPQVGIYLKKNQMKDMA TLLNKSQESSLTVDIEYFKEALSKVDSQMKNLPATAQVASQQGIYLADCFNRMELCEKYPEGPLRFRGTGRHRFHPFRYK HFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKQVSWRTRALVVSDWTRRFIFGRDSSRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 546 | 545 | 0.0 | – | |
| PANTHER | 2 | 546 | 545 | 0.0 | – | |
| Gene3D | 17 | 376 | 360 | 1.6E-135 | – | |
| SUPERFAMILY | 25 | 244 | 220 | 4.49E-30 | ||
| Pfam | 26 | 351 | 326 | 1.4E-62 | ||
| PRINTS | 28 | 47 | 20 | 1.3E-9 | – | |
| PRINTS | 131 | 149 | 19 | 1.3E-9 | – | |
| SUPERFAMILY | 188 | 345 | 158 | 9.26E-20 | ||
| PRINTS | 192 | 210 | 19 | 1.3E-9 | – | |
| PRINTS | 320 | 342 | 23 | 1.3E-9 | – | |
| SUPERFAMILY | 342 | 432 | 91 | 2.59E-6 | ||
| ProSiteProfiles | 348 | 383 | 36 | 10.441 | ||
| ProSitePatterns | 361 | 373 | 13 | - | ||
| Gene3D | 392 | 546 | 155 | 9.5E-27 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0459400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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