Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0461200.1

Overview

Field Value
Gene ID LotjaGi3g1v0461200
Transcript ID LotjaGi3g1v0461200.1
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase; TAIR: AT4G27300.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1; TrEMBL-Plants: tr|K7KXE1|K7KXE1_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0461200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:87630473..87632715) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAATGTGTGCCACTGAATTCCATCCCTTTCCATCCATTTTTAATTAATCCAAACAAAGGACCTCTTCCTCCATCCCC TCCACTCCATCCCGCTCCATCCCCTTCCACCGATCCAAACGAAGCCAAATGGGTTTCCTTTCCCCATTTGGATTGTTGTT GATTATGAAGTTATTACTAAGGGAACTTATTTGTTATGTGGCATTTGTTTTCCATGTTAAAATCATTTCCTTCCTCATTC TCTTAAAGAAATTAAACGCAATTCCTCGCAAACAGCTTTGTTCAAAAAGTTGGAGACTAATCATGCTCTACATCTTTCAG ATCATGTTGCAGCGGAAAACCATGGAAACATCAAGAAGATAATCGGAATCACAGTTGCTGTGACTATTTCGGGATTAGTT ACATGGGGATCAATATGGATGATTAAAAATCCAGGTAAATTCACATAAATAACCATCTTACATAGGAAACAAATATTTCA TATCTTTCAACCAATCAAGGGTTGTATTATAGTGTTTGTATCTTCTAACTTATCAGGGGCTGCAAGAAATACTTTCAGTT TCAGCAAGCGTTACAAAAGAAACCTAAGGAAGGAAGATGTTGACTTGTCAACGTTTGATTTCTCGGTCTTGGCAAATGCC ACTAAAAACTTTTCAAGTGGTAACAAACTTGGAGAAGGTGGCTTTGGTCCAGTATACAAGGTGACAAAAGTTTTAGATAA CATCTCCATTCCTCCTTAGAACCTTTCTAACCATATCATATTTTAGGGAATGTTGCCAGATGGACAAGAGATAGCTGTGA AAAGGCTTTCGAAAAGATCTGGACAAGGGCTGGAGGAATTTAAAAATGAAGTGGCGCTAATTTCCAAACTTCAGCACCGT AATCTCATAAAGCTTCTTGGTTATTTTATTCAAGGAGAAGAAACAATGTTGATCTATGAATACATGCCCAACAAAAGCTT GGACTACTTTGTTTTTGGTTGGCATATTTTTCAATTTATCATAAACTTCAGTAACAATCTTCTAATTTCTTATCATAATT TTTGATACTATGGAAACTGAAGTTTTATGCTAAATATGTATGTGTTTAATTGACCAGATGAAACCAAAAGCATGTCACTA GATTGGCTTAAGCGTTTCAATATTATTGGTAGCATTGCTCGTGGACTTCTTTATCTTCATCAAGACTCAAGACTGAGGAT TATCCACAGAGATCTAAAAGCTAGCAATATATTACTAGATGTAAATTTGGAACCAAAAATATCAGACTTCGGCTTGGCTC GAATATTTTTGGGAGACCAAATCGAGGATAACACAAATAGAGTGGCTGGAACATAGTAAGTTAGTTCCTACATGTTTATG GTTCTTTGATATTGCATTTTCAAGTCATACTAATTTTACTTTGAAAACAATATATTCAGTGGTTACATATCTCCAGAGTA TGCTGTCCATGGGCATTTCTCAGTAAAGTCTGATGTCTTTAGCTATGGTGTGATTGTACTAGAGATTGTAAGTGGGAAAA AGAACAGGGAATTTTCAGACCCCAAACACCGCCATAATCTTCTTGGATATGTAAGCATAATCACCTCACTACCTTGCTTA TTAGTTTAATTTGAACTGTTTCCTGTCACTAATTTGTCTTTCACTTAATAGGCATGGAGATTATGGACTGAAGAGAGAGC GCTGGAACTATTGGATGAAGTGTTACGGGAACAATACACACCATTTGAAGTCATGCGAAGCATACAGGTGAGCCTATTAT GCGTGCAACAAAGGCCAGAAGATAGACCAGACATGTCATCTGTGGTTCTAATGCTAAATGGTGAGAAACTATTGCCAAAG CCAAAGGTTCCTGGCTTTTACAATGAAAAGGATTTAAGTGCCGAATCAAATTCTTCACCGGCAAATCACAAATTATGCTC AGTTAATGAATTGTCCATCACGGAGTTAGATGCCAGATAGGGTACTGAGTCAAGGGAAATGACAAGTCTTCACCTTCCAA CGCGGGATATATAGGTTATTCGAGCAAACATAGTTTTTGAAATAGCTTATGGTTTTACTATTATGAACTCGTGTTTTGAC AGTCAAATATATCCAGACACATGCATGAGGTAAACAAATTTTATATGAAGACAATAAAGCTCAATTGCTATTTGTTGTAG AATGTGGTTGATGTATTGAACGGGATTCAAATCTCCCTTCTCCTTGGAGAACTTTTGACACCAAAGAAATTGAAATATTT TTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0461200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTAAAAATCCAGGGGCTGCAAGAAATACTTTCAGTTTCAGCAAGCGTTACAAAAGAAACCTAAGGAAGGAAGATGT TGACTTGTCAACGTTTGATTTCTCGGTCTTGGCAAATGCCACTAAAAACTTTTCAAGTGGTAACAAACTTGGAGAAGGTG GCTTTGGTCCAGTATACAAGGGAATGTTGCCAGATGGACAAGAGATAGCTGTGAAAAGGCTTTCGAAAAGATCTGGACAA GGGCTGGAGGAATTTAAAAATGAAGTGGCGCTAATTTCCAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGTTATTT TATTCAAGGAGAAGAAACAATGTTGATCTATGAATACATGCCCAACAAAAGCTTGGACTACTTTGTTTTTGATGAAACCA AAAGCATGTCACTAGATTGGCTTAAGCGTTTCAATATTATTGGTAGCATTGCTCGTGGACTTCTTTATCTTCATCAAGAC TCAAGACTGAGGATTATCCACAGAGATCTAAAAGCTAGCAATATATTACTAGATGTAAATTTGGAACCAAAAATATCAGA CTTCGGCTTGGCTCGAATATTTTTGGGAGACCAAATCGAGGATAACACAAATAGAGTGGCTGGAACATATGGTTACATAT CTCCAGAGTATGCTGTCCATGGGCATTTCTCAGTAAAGTCTGATGTCTTTAGCTATGGTGTGATTGTACTAGAGATTGTA AGTGGGAAAAAGAACAGGGAATTTTCAGACCCCAAACACCGCCATAATCTTCTTGGATATGCATGGAGATTATGGACTGA AGAGAGAGCGCTGGAACTATTGGATGAAGTGTTACGGGAACAATACACACCATTTGAAGTCATGCGAAGCATACAGGTGA GCCTATTATGCGTGCAACAAAGGCCAGAAGATAGACCAGACATGTCATCTGTGGTTCTAATGCTAAATGGTGAGAAACTA TTGCCAAAGCCAAAGGTTCCTGGCTTTTACAATGAAAAGGATTTAAGTGCCGAATCAAATTCTTCACCGGCAAATCACAA ATTATGCTCAGTTAATGAATTGTCCATCACGGAGTTAGATGCCAGATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0461200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIKNPGAARNTFSFSKRYKRNLRKEDVDLSTFDFSVLANATKNFSSGNKLGEGGFGPVYKGMLPDGQEIAVKRLSKRSGQ GLEEFKNEVALISKLQHRNLIKLLGYFIQGEETMLIYEYMPNKSLDYFVFDETKSMSLDWLKRFNIIGSIARGLLYLHQD SRLRIIHRDLKASNILLDVNLEPKISDFGLARIFLGDQIEDNTNRVAGTYGYISPEYAVHGHFSVKSDVFSYGVIVLEIV SGKKNREFSDPKHRHNLLGYAWRLWTEERALELLDEVLREQYTPFEVMRSIQVSLLCVQQRPEDRPDMSSVVLMLNGEKL LPKPKVPGFYNEKDLSAESNSSPANHKLCSVNELSITELDAR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
7 119 113 8.9E-38 –
PANTHER
PTHR27006:SF120
23 333 311 2.1E-131 –
PANTHER
PTHR27006
23 333 311 2.1E-131 –
SUPERFAMILY
SSF56112
28 325 298 4.59E-80
IPR011009
SMART
SM00220
44 293 250 6.6E-30
IPR000719
ProSiteProfiles
PS50011
44 321 278 38.492
IPR000719
Pfam
PF07714
46 313 268 1.1E-46
IPR001245
CDD
cd14066
50 317 268 2.4857E-89 –
Gene3D
G3DSA:1.10.510.10
120 323 204 8.4E-56 –
ProSitePatterns
PS00108
165 177 13 -
IPR008271
Pfam
PF11883
321 362 42 1.1E-8
IPR021820

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0461200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…