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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0492000 |
Transcript ID | LotjaGi3g1v0492000.2 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G59010.2 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|B9FDE0|BSK3_ORYSJ Probable serine/threonine-protein kinase BSK3; TrEMBL-Plants: tr|A0A0L9T6M7|A0A0L9T6M7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90974088..90977838) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAGCTCGTTGCTCCAAATTCTCTCTGTGTTGGTGGCCTTCCAATATCAAATCAAACCTTCATGATTTATCTCATAA TGGTGAGAGCTTCTTCTTTCTTTTTCCCACTTTCACTAGTCACTTTATGAAGCTGATTTGAGCTTAAAGTTTTTGTCTTT AACATGGTTTCATTTCTGGGTATAGATGATGATGATGGGAGCAAGAATGAGAAAGTGGGGTTCACTGAGTACACCTTGGA TCAGCTCAAAATTGCAACTTCAGGTTTTTCACCTGAGAACATTGTCTCTGAGCATGGTGAGAAAGCTCCTAATGTTGTTT ATAGAGGAAGGGTTGAAGATGATAGGTTGGTTGCTGTCAAGAGGTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTC CTAGTTCGTGCTGCTTCTGTTTCTGCTTTTTCTTTGCATGTGTTGTGTGTTTTTGTGAGTGGAAGATGTTCATGTTTGAT TGATGTTTTGTGTGTGTGTGTGTGTGTTTGGTTGGGCATTTTGTTTAGGAGGAAGCAAGAGCAGTGGGGCAGCTAAGGAG TGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCTGAGTTCATGCCCTATGAAA CTCTCTCAAGACATCTTTTTCATTGTAAGTTCTCATTCATTTGGTTTTCAATCTTACATTTTTCAGCAATCCATTGAAGA AAATATCTAATTTTGAAGTCTCTTTTGTTTGACAAGGATAAGGCATTTTGCTTTATAAGCTATATTAGGTGCCAAATTTA AGTAATCTACTCCTAGTAGCTTTTGTGGCAGTACAATTGATTCTTGATTCTGGAAGATCTGAATGTGAATCCAAACATGC TAATAGTTTGTGAAGCATTATCATTTATCTCTATGTAAACCCCTGATTTTGTGATTTGTGTGAAATGCTCTGGCAGGGGA GACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAG GAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGTACTTCAGCTTTCATAACCTGGCTTTTTG CCTCTTTTAACTTTTTTTTTTCAACAATCTCTTATGTGGTATCAATGGTGGGCAGGATGGCAACCCTAGACTCTCTTGTT TTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAAT GGTAATAGTTGATTTAAGATCAAAAAAAGTATATGCTAACGTGCTTGAACTCCACGTAAGCTACAATATTGAGCTTCTCT TCTAACGTGCTTTGGAGTGTGTGTCCAACACACATCCAAACATACTCATTGTCTTAACTGAGCTAACACCTGTTTGAAAT TTGGCAGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATAT CCCACCCAGTCATGTATACTCCCTCCTTCCCATTTCATGACTTCTTATTTTAATTTTAGGTGGTGTTTTGTTCAGTAAAT TTTTTACTTGTCAAATATTGGTACTTTAGATGATTTAAGTAACATCCTATGATGGTTTTGCTTAAAATGATCATCGCATT TATAGAGTTGATCCTTGTTCCCTTCACTTCACATACAGGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCTGATG GACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATACGA GCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTATGCTCTTCCT ATTCGCTTTCTCTCTGCTTTTGGGAACCATAGAAACATATTTGGTATTTGGCTTACCATTTGTGGTATTTCACAGGTACC TTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTT GTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAG GTAATTCATTGTTTCTATTTCTTTCTCAATAATACTTTTATGAAGACAATTTGTTGTAAGAGGCTTTTCGTAACTTAACT TTTTGTCTACAAAAAAAATTTGAAAATCTGCTTGACGCTGGATGTATGAATTTGCAAGTTTCTTTTGGTGTGTGTGTCTA TATATTCCGAATGTAGTTTTTAAACTGTCTCTTTGAGTATCAATGTTTAACTGCCAAGTACTGTTCTTCATGTTAAATTG TCTTTCAACACCGTCTGCATTTGGTTATAAAGAGGCATGATCTTTGCTACTTGCTACTAATAATTGATATCTGAGATTGT TGAAAGCCTTGCTTATGCATGCAAATTTTGTGCATTTGGGTTTCTCCATTCAAGGAAATGCCATATCATGGTTTTCATTT TTTTTCCCATTGTCATCACTTTATAAAGTTTGATTCTGTAGCATGGCAAAAAGTGTTTTTGTTTGATAATTCTTCTATAG TTCTTAGCAACTGGACCTTCCTTTTTATCGTGAAATTATATTTATGGATCTGTATCCTTACATTGTATCTCAGCTGTCAT TCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGACTTC TCTATGGCCATTGACTGCTATACACAAGTAAGTCAGCTACAAATGCTTCAAATAGTCATTCAGGAAAAATCTCCAAAACA ATACCCAAATCAATTCTTTATCACCTCATAGTATTTCATTCATATAATTCATCCAAACAAATAAATACTTTTCCATTGTA GATTTTATGAAATATTTGTTAGCATGCCTGACATAGTCCGTCTTTGCTACTTTGAATCTTTGAGCCAGAACTAGAATGAT GAGTTGGTAAAGGACTAAAAGGAGTTATTGCTTTTGAATTAGCATAAGTTAATAATTGAGGGACAGTTTTAGTTAAATTT GTCATGAACGAACTATACTAAAAGCTTAAGTGTTGGGGTGAAGAAGGCACGTGAATGAAGCTTGGACAATGCCAAAGCTC ACTACCTTGTGCTGAAACTTAACTGTTTTTTCATTAGAATAATGGGGGCAGCGAGGATCGAAGTTTAAACTATTGGGTGG AAACACATGAATGATCTTATATTATATTTCTAATTGTATCCATATATATCTTGCAAGTTGTAAAAGAGGGAGCTATTTTC AGAATAGACATTATCAAAGCTGTATAAACCTTAGCATTGCCATGTAGATTATATGTTCCCCTCCATTACCTACAAAGCAT GCTAAAAGAAGATTGAACTGTGATAACTTCTTTTTTAAGAGAGAATTCATGACACTTGTTTTATGCAGTTCATCGATGGC GGGACTATGGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGG AGATGCCATGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTG GCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
CDS sequence (LotjaGi3g1v0492000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCTATGAAACTCTCTCAAGACATCTTTTTCATTGGGAGACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGC CTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTT TGTTTGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACA AATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCT GCTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGC TGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAA TACGAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTACCTTC ATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTTGTT CAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAGCTG TCATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGA CTTCTCTATGGCCATTGACTGCTATACACAATTCATCGATGGCGGGACTATGGTATCACCAACCGTGTATGCGAGGCGCT GCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCTATATCTCCCACCTGG CCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGG CACAACACTGGAAACCAGAAAGCATAAATATTGA
Protein sequence (LotjaGi3g1v0492000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPYETLSRHLFHWETQPMKWAMRLRVALYLAQALEYCSIKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYST NLAFTPPEYLRNGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSGLEGHFSNDDGTELVRLASRCLQ YEPRERPNTKTLVTALTPLQKETSVPSSVLLGIPDGSLSPKETISLTPFGEACSRRDLTEIHEILEKVGYKDDEDVANEL SFQMWTNQIQDTLNSKKHGDSAFRAKDFSMAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTW PTAFYLQAVALFFLGMDNDAQESLKDGTTLETRKHKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 356 | 356 | 1.6E-224 | – | |
PANTHER | 1 | 356 | 356 | 1.6E-224 | – | |
ProSiteProfiles | 1 | 180 | 180 | 15.976 | ||
SUPERFAMILY | 1 | 181 | 181 | 1.63E-26 | ||
Gene3D | 2 | 194 | 193 | 1.1E-42 | – | |
Pfam | 2 | 176 | 175 | 1.2E-14 | ||
Gene3D | 238 | 357 | 120 | 1.7E-15 | ||
SUPERFAMILY | 255 | 347 | 93 | 3.56E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0492000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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