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LotjaGi3g1v0492000.3

Overview

Field Value
Gene ID LotjaGi3g1v0492000
Transcript ID LotjaGi3g1v0492000.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G59010.1 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|B9FDE0|BSK3_ORYSJ Probable serine/threonine-protein kinase BSK3; TrEMBL-Plants: tr|A0A0S3SD69|A0A0S3SD69_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:90974088..90977838) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGAGCTCGTTGCTCCAAATTCTCTCTGTGTTGGTGGCCTTCCAATATCAAATCAAACCTTCATGATTTATCTCATAA TGGTGAGAGCTTCTTCTTTCTTTTTCCCACTTTCACTAGTCACTTTATGAAGCTGATTTGAGCTTAAAGTTTTTGTCTTT AACATGGTTTCATTTCTGGGTATAGATGATGATGATGGGAGCAAGAATGAGAAAGTGGGGTTCACTGAGTACACCTTGGA TCAGCTCAAAATTGCAACTTCAGGTTTTTCACCTGAGAACATTGTCTCTGAGCATGGTGAGAAAGCTCCTAATGTTGTTT ATAGAGGAAGGGTTGAAGATGATAGGTTGGTTGCTGTCAAGAGGTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTC CTAGTTCGTGCTGCTTCTGTTTCTGCTTTTTCTTTGCATGTGTTGTGTGTTTTTGTGAGTGGAAGATGTTCATGTTTGAT TGATGTTTTGTGTGTGTGTGTGTGTGTTTGGTTGGGCATTTTGTTTAGGAGGAAGCAAGAGCAGTGGGGCAGCTAAGGAG TGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCTGAGTTCATGCCCTATGAAA CTCTCTCAAGACATCTTTTTCATTGTAAGTTCTCATTCATTTGGTTTTCAATCTTACATTTTTCAGCAATCCATTGAAGA AAATATCTAATTTTGAAGTCTCTTTTGTTTGACAAGGATAAGGCATTTTGCTTTATAAGCTATATTAGGTGCCAAATTTA AGTAATCTACTCCTAGTAGCTTTTGTGGCAGTACAATTGATTCTTGATTCTGGAAGATCTGAATGTGAATCCAAACATGC TAATAGTTTGTGAAGCATTATCATTTATCTCTATGTAAACCCCTGATTTTGTGATTTGTGTGAAATGCTCTGGCAGGGGA GACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAG GAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGTACTTCAGCTTTCATAACCTGGCTTTTTG CCTCTTTTAACTTTTTTTTTTCAACAATCTCTTATGTGGTATCAATGGTGGGCAGGATGGCAACCCTAGACTCTCTTGTT TTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAAT GGTAATAGTTGATTTAAGATCAAAAAAAGTATATGCTAACGTGCTTGAACTCCACGTAAGCTACAATATTGAGCTTCTCT TCTAACGTGCTTTGGAGTGTGTGTCCAACACACATCCAAACATACTCATTGTCTTAACTGAGCTAACACCTGTTTGAAAT TTGGCAGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATAT CCCACCCAGTCATGTATACTCCCTCCTTCCCATTTCATGACTTCTTATTTTAATTTTAGGTGGTGTTTTGTTCAGTAAAT TTTTTACTTGTCAAATATTGGTACTTTAGATGATTTAAGTAACATCCTATGATGGTTTTGCTTAAAATGATCATCGCATT TATAGAGTTGATCCTTGTTCCCTTCACTTCACATACAGGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCTGATG GACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATACGA GCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTATGCTCTTCCT ATTCGCTTTCTCTCTGCTTTTGGGAACCATAGAAACATATTTGGTATTTGGCTTACCATTTGTGGTATTTCACAGGTACC TTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTT GTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAG GTAATTCATTGTTTCTATTTCTTTCTCAATAATACTTTTATGAAGACAATTTGTTGTAAGAGGCTTTTCGTAACTTAACT TTTTGTCTACAAAAAAAATTTGAAAATCTGCTTGACGCTGGATGTATGAATTTGCAAGTTTCTTTTGGTGTGTGTGTCTA TATATTCCGAATGTAGTTTTTAAACTGTCTCTTTGAGTATCAATGTTTAACTGCCAAGTACTGTTCTTCATGTTAAATTG TCTTTCAACACCGTCTGCATTTGGTTATAAAGAGGCATGATCTTTGCTACTTGCTACTAATAATTGATATCTGAGATTGT TGAAAGCCTTGCTTATGCATGCAAATTTTGTGCATTTGGGTTTCTCCATTCAAGGAAATGCCATATCATGGTTTTCATTT TTTTTCCCATTGTCATCACTTTATAAAGTTTGATTCTGTAGCATGGCAAAAAGTGTTTTTGTTTGATAATTCTTCTATAG TTCTTAGCAACTGGACCTTCCTTTTTATCGTGAAATTATATTTATGGATCTGTATCCTTACATTGTATCTCAGCTGTCAT TCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGACTTC TCTATGGCCATTGACTGCTATACACAAGTAAGTCAGCTACAAATGCTTCAAATAGTCATTCAGGAAAAATCTCCAAAACA ATACCCAAATCAATTCTTTATCACCTCATAGTATTTCATTCATATAATTCATCCAAACAAATAAATACTTTTCCATTGTA GATTTTATGAAATATTTGTTAGCATGCCTGACATAGTCCGTCTTTGCTACTTTGAATCTTTGAGCCAGAACTAGAATGAT GAGTTGGTAAAGGACTAAAAGGAGTTATTGCTTTTGAATTAGCATAAGTTAATAATTGAGGGACAGTTTTAGTTAAATTT GTCATGAACGAACTATACTAAAAGCTTAAGTGTTGGGGTGAAGAAGGCACGTGAATGAAGCTTGGACAATGCCAAAGCTC ACTACCTTGTGCTGAAACTTAACTGTTTTTTCATTAGAATAATGGGGGCAGCGAGGATCGAAGTTTAAACTATTGGGTGG AAACACATGAATGATCTTATATTATATTTCTAATTGTATCCATATATATCTTGCAAGTTGTAAAAGAGGGAGCTATTTTC AGAATAGACATTATCAAAGCTGTATAAACCTTAGCATTGCCATGTAGATTATATGTTCCCCTCCATTACCTACAAAGCAT GCTAAAAGAAGATTGAACTGTGATAACTTCTTTTTTAAGAGAGAATTCATGACACTTGTTTTATGCAGTTCATCGATGGC GGGACTATGGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGG AGATGCCATGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTG GCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0492000.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGCTCGTTGCTCCAAATTCTCTCTGTGTTGGTGGCCTTCCAATATCAAATCAAACCTTCATGATTTATCTCATAA TGATGATGATGATGGGAGCAAGAATGAGAAAGTGGGGTTCACTGAGTACACCTTGGATCAGCTCAAAATTGCAACTTCAG GTTTTTCACCTGAGAACATTGTCTCTGAGCATGGTGAGAAAGCTCCTAATGTTGTTTATAGAGGAAGGGTTGAAGATGAT AGGTTGGTTGCTGTCAAGAGGTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAAGCAAGAGCAGTGGG GCAGCTAAGGAGTGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCTGAGTTCA TGCCCTATGAAACTCTCTCAAGACATCTTTTTCATTGGGAGACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGCC TTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTTT GTTTGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACAA ATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCTG CTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCT GATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAAT ACGAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTACCTTCA TCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTTGTTC AAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAGCTGT CATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGAC TTCTCTATGGCCATTGACTGCTATACACAATTCATCGATGGCGGGACTATGGTATCACCAACCGTGTATGCGAGGCGCTG CTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCTATATCTCCCACCTGGC CCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGC ACAACACTGGAAACCAGAAAGCATAAATATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0492000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGARCSKFSLCWWPSNIKSNLHDLSHNDDDDGSKNEKVGFTEYTLDQLKIATSGFSPENIVSEHGEKAPNVVYRGRVEDD RLVAVKRFNKSAWPDSRQFLEEARAVGQLRSERLANLVGCCCEGEERLLVAEFMPYETLSRHLFHWETQPMKWAMRLRVA LYLAQALEYCSIKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRNGRITAESVVYSFGTL LLDLLSGKHIPPSHALDLIRGKNFLMLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNTKTLVTALTPLQKETSVPS SVLLGIPDGSLSPKETISLTPFGEACSRRDLTEIHEILEKVGYKDDEDVANELSFQMWTNQIQDTLNSKKHGDSAFRAKD FSMAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAFYLQAVALFFLGMDNDAQESLKDG TTLETRKHKY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45863
1 489 489 1.0E-293 –
PANTHER
PTHR45863:SF6
1 489 489 1.0E-293 –
Gene3D
G3DSA:3.30.200.20
29 133 105 3.7E-28 –
SUPERFAMILY
SSF56112
32 314 283 1.34E-44
IPR011009
ProSiteProfiles
PS50011
58 313 256 21.277
IPR000719
Pfam
PF07714
72 309 238 6.4E-28
IPR001245
Gene3D
G3DSA:1.10.510.10
135 326 192 2.5E-42 –
Gene3D
G3DSA:1.25.40.10
383 490 108 3.1E-15
IPR011990
SUPERFAMILY
SSF48452
388 480 93 6.17E-14
IPR011990

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0492000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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